RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 FER1L4A9Z1Z3 1794 aa24.36■■□□□ 1.49
VAC14-206ENST00000564685 PLCH2O75038 1416 aa24.35■■□□□ 1.49
VAC14-206ENST00000564685 CERKQ8TCT0 537 aa24.33■■□□□ 1.49
VAC14-206ENST00000564685 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
VAC14-206ENST00000564685 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
VAC14-206ENST00000564685 ATP10AO60312 1499 aa24.31■■□□□ 1.48
VAC14-206ENST00000564685 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
VAC14-206ENST00000564685 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
VAC14-206ENST00000564685 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
VAC14-206ENST00000564685 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
VAC14-206ENST00000564685 UBTFP17480 764 aaKnown RBP24.23■■□□□ 1.47
VAC14-206ENST00000564685 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
VAC14-206ENST00000564685 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
VAC14-206ENST00000564685 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
VAC14-206ENST00000564685 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
VAC14-206ENST00000564685 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
VAC14-206ENST00000564685 KIF14Q15058 1648 aa24.18■■□□□ 1.46
VAC14-206ENST00000564685 AFAP1Q8N556 730 aa24.18■■□□□ 1.46
VAC14-206ENST00000564685 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
VAC14-206ENST00000564685 SETD1BQ9UPS6 1966 aaKnown RBP24.17■■□□□ 1.46
VAC14-206ENST00000564685 DMRT2Q9Y5R5 561 aa24.17■■□□□ 1.46
VAC14-206ENST00000564685 ARHGAP5Q13017 1502 aa24.16■■□□□ 1.46
VAC14-206ENST00000564685 ARHGAP35Q9NRY4 1499 aa24.15■■□□□ 1.46
VAC14-206ENST00000564685 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
VAC14-206ENST00000564685 KDM5CP41229 1560 aa24.13■■□□□ 1.45
VAC14-206ENST00000564685 UHRF1BP1Q6BDS2 1440 aa24.13■■□□□ 1.45
VAC14-206ENST00000564685 CLIP1P30622 1438 aa24.12■■□□□ 1.45
VAC14-206ENST00000564685 STRCQ7RTU9 1775 aa24.12■■□□□ 1.45
VAC14-206ENST00000564685 DIP2CQ9Y2E4 1556 aa24.08■■□□□ 1.45
VAC14-206ENST00000564685 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
VAC14-206ENST00000564685 ESF1Q9H501 851 aaKnown RBP24.06■■□□□ 1.44
VAC14-206ENST00000564685 CDC42BPBQ9Y5S2 1711 aa24.05■■□□□ 1.44
VAC14-206ENST00000564685 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
VAC14-206ENST00000564685 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
VAC14-206ENST00000564685 ABCA6Q8N139 1617 aa24.03■■□□□ 1.44
VAC14-206ENST00000564685 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
VAC14-206ENST00000564685 C3P01024 1663 aa24.02■■□□□ 1.44
VAC14-206ENST00000564685 PTPRTO14522 1441 aa24.01■■□□□ 1.43
VAC14-206ENST00000564685 TRAPPC8Q9Y2L5 1435 aa24.01■■□□□ 1.43
VAC14-206ENST00000564685 AGLP35573 1532 aa24■■□□□ 1.43
VAC14-206ENST00000564685 PREX2Q70Z35 1606 aa23.99■■□□□ 1.43
VAC14-206ENST00000564685 ABCC1P33527 1531 aa23.98■■□□□ 1.43
VAC14-206ENST00000564685 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
VAC14-206ENST00000564685 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.43
VAC14-206ENST00000564685 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
VAC14-206ENST00000564685 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
VAC14-206ENST00000564685 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
VAC14-206ENST00000564685 CASKIN1Q8WXD9 1431 aa23.93■■□□□ 1.42
VAC14-206ENST00000564685 CDC42BPAQ5VT25 1732 aa23.9■■□□□ 1.42
VAC14-206ENST00000564685 SOCS7O14512 581 aa23.89■■□□□ 1.41
VAC14-206ENST00000564685 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
VAC14-206ENST00000564685 LTBP4Q8N2S1 1624 aa23.88■■□□□ 1.41
VAC14-206ENST00000564685 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
VAC14-206ENST00000564685 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
VAC14-206ENST00000564685 SAMD9LQ8IVG5 1584 aa23.85■■□□□ 1.41
VAC14-206ENST00000564685 NPATQ14207 1427 aa23.84■■□□□ 1.41
VAC14-206ENST00000564685 IQSEC2Q5JU85 1478 aa23.84■■□□□ 1.41
VAC14-206ENST00000564685 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
VAC14-206ENST00000564685 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
VAC14-206ENST00000564685 MROH2AA6NES4 1674 aa23.83■■□□□ 1.4
VAC14-206ENST00000564685 CAMSAP1Q5T5Y3 1602 aa23.82■■□□□ 1.4
VAC14-206ENST00000564685 SPATA31D1Q6ZQQ2 1576 aa23.82■■□□□ 1.4
VAC14-206ENST00000564685 HNRNPMP52272 730 aaKnown RBP eCLIP23.81■■□□□ 1.4
VAC14-206ENST00000564685 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
VAC14-206ENST00000564685 FYCO1Q9BQS8 1478 aa23.8■■□□□ 1.4
VAC14-206ENST00000564685 SYCP2Q9BX26 1530 aa23.79■■□□□ 1.4
VAC14-206ENST00000564685 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
VAC14-206ENST00000564685 NCKAP5LQ9HCH0 1330 aa23.78■■□□□ 1.4
VAC14-206ENST00000564685 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
VAC14-206ENST00000564685 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
VAC14-206ENST00000564685 CFDP1Q9UEE9 299 aaPredicted RBP23.74■■□□□ 1.39
VAC14-206ENST00000564685 KIAA1107Q9UPP5 1409 aa23.74■■□□□ 1.39
VAC14-206ENST00000564685 ZNF335Q9H4Z2 1342 aaPredicted RBP23.73■■□□□ 1.39
VAC14-206ENST00000564685 PLEKHH2Q8IVE3 1493 aa23.73■■□□□ 1.39
VAC14-206ENST00000564685 PKD2Q13563 968 aa23.72■■□□□ 1.39
VAC14-206ENST00000564685 A2MP01023 1474 aa23.72■■□□□ 1.39
VAC14-206ENST00000564685 UBAP1LF5GYI3 381 aa23.71■■□□□ 1.39
VAC14-206ENST00000564685 GGT6Q6P531 493 aa23.71■■□□□ 1.39
VAC14-206ENST00000564685 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
VAC14-206ENST00000564685 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
VAC14-206ENST00000564685 PTPRKQ15262 1439 aa23.69■■□□□ 1.38
VAC14-206ENST00000564685 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
VAC14-206ENST00000564685 ZNF142P52746 1687 aaPredicted RBP23.69■■□□□ 1.38
VAC14-206ENST00000564685 MYO3AQ8NEV4 1616 aa23.69■■□□□ 1.38
VAC14-206ENST00000564685 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
VAC14-206ENST00000564685 CEP170BQ9Y4F5 1589 aaPredicted RBP23.68■■□□□ 1.38
VAC14-206ENST00000564685 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
VAC14-206ENST00000564685 TCOF1Q13428 1488 aaKnown RBP23.65■■□□□ 1.38
VAC14-206ENST00000564685 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
VAC14-206ENST00000564685 ADGBQ8N7X0 1667 aa23.62■■□□□ 1.37
VAC14-206ENST00000564685 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
VAC14-206ENST00000564685 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
VAC14-206ENST00000564685 MBD5Q9P267 1494 aa23.55■■□□□ 1.36
VAC14-206ENST00000564685 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
VAC14-206ENST00000564685 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
VAC14-206ENST00000564685 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
VAC14-206ENST00000564685 RTEL1-TNFRSF6BF6WH68 1400 aa23.53■■□□□ 1.36
VAC14-206ENST00000564685 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
VAC14-206ENST00000564685 KIF3BO15066 747 aa23.5■■□□□ 1.35
VAC14-206ENST00000564685 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms