RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 VARS2Q5ST30 1063 aaKnown RBP15.87■□□□□ 0.13
AP000842.3-201ENST00000564354 GPR153Q6NV75 609 aa15.85■□□□□ 0.13
AP000842.3-201ENST00000564354 ZNF687Q8N1G0 1237 aa15.8■□□□□ 0.12
AP000842.3-201ENST00000564354 NLRP6P59044 892 aa15.79■□□□□ 0.12
AP000842.3-201ENST00000564354 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
AP000842.3-201ENST00000564354 TAOK2Q9UL54 1235 aa15.76■□□□□ 0.11
AP000842.3-201ENST00000564354 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
AP000842.3-201ENST00000564354 RNF166Q96A37 237 aaPredicted RBP15.73■□□□□ 0.11
AP000842.3-201ENST00000564354 ARSIQ5FYB1 569 aa15.71■□□□□ 0.11
AP000842.3-201ENST00000564354 MFRPQ9BY79 579 aa15.69■□□□□ 0.1
AP000842.3-201ENST00000564354 STK24Q9Y6E0 443 aa15.69■□□□□ 0.1
AP000842.3-201ENST00000564354 MYT1LQ9UL68 1186 aa15.68■□□□□ 0.1
AP000842.3-201ENST00000564354 KIF3CO14782 793 aa15.64■□□□□ 0.09
AP000842.3-201ENST00000564354 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
AP000842.3-201ENST00000564354 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.09
AP000842.3-201ENST00000564354 PTGER2P43116 358 aa15.62■□□□□ 0.09
AP000842.3-201ENST00000564354 STK25O00506 426 aa15.61■□□□□ 0.09
AP000842.3-201ENST00000564354 C2orf72A6NCS6 295 aa15.58■□□□□ 0.08
AP000842.3-201ENST00000564354 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
AP000842.3-201ENST00000564354 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
AP000842.3-201ENST00000564354 SLC34A2O95436 690 aa15.51■□□□□ 0.07
AP000842.3-201ENST00000564354 LSM11P83369 360 aaKnown RBP eCLIP15.51■□□□□ 0.07
AP000842.3-201ENST00000564354 NUDT7P0C024 238 aa15.49■□□□□ 0.07
AP000842.3-201ENST00000564354 RGL2O15211 777 aa15.47■□□□□ 0.07
AP000842.3-201ENST00000564354 PKD2Q13563 968 aa15.47■□□□□ 0.07
AP000842.3-201ENST00000564354 PBX2P40425 430 aa15.46■□□□□ 0.07
AP000842.3-201ENST00000564354 PCDHGA4Q9Y5G9 962 aa15.46■□□□□ 0.07
AP000842.3-201ENST00000564354 LHX6Q9UPM6 363 aa15.44■□□□□ 0.06
AP000842.3-201ENST00000564354 TMC2Q8TDI7 906 aa15.43■□□□□ 0.06
AP000842.3-201ENST00000564354 POTEEQ6S8J3 1075 aa15.42■□□□□ 0.06
AP000842.3-201ENST00000564354 PPP1R37O75864 691 aa15.37■□□□□ 0.05
AP000842.3-201ENST00000564354 AXIN2Q9Y2T1 843 aa15.35■□□□□ 0.05
AP000842.3-201ENST00000564354 KDM4FA0A1W2PPD8 638 aa15.31■□□□□ 0.04
AP000842.3-201ENST00000564354 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
AP000842.3-201ENST00000564354 PTCD2Q8WV60 388 aaKnown RBP15.28■□□□□ 0.04
AP000842.3-201ENST00000564354 ARHGAP33O14559 1287 aa15.26■□□□□ 0.03
AP000842.3-201ENST00000564354 FOXK1P85037 733 aa15.24■□□□□ 0.03
AP000842.3-201ENST00000564354 ADGRD1Q6QNK2 874 aa15.24■□□□□ 0.03
AP000842.3-201ENST00000564354 PLPP6Q8IY26 295 aa15.19■□□□□ 0.02
AP000842.3-201ENST00000564354 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
AP000842.3-201ENST00000564354 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
AP000842.3-201ENST00000564354 TK2O00142 265 aa15.18■□□□□ 0.02
AP000842.3-201ENST00000564354 HS6ST3Q8IZP7 471 aa15.18■□□□□ 0.02
AP000842.3-201ENST00000564354 HRO43593 1189 aa15.14■□□□□ 0.01
AP000842.3-201ENST00000564354 DSG2Q14126 1118 aa15.14■□□□□ 0.01
AP000842.3-201ENST00000564354 DMRTA1Q5VZB9 504 aa15.14■□□□□ 0.01
AP000842.3-201ENST00000564354 PLA2G2EQ9NZK7 142 aa15.14■□□□□ 0.01
AP000842.3-201ENST00000564354 PSEN2P49810 448 aa15.12■□□□□ 0.01
AP000842.3-201ENST00000564354 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
AP000842.3-201ENST00000564354 TBC1D12O60347 775 aa15.09■□□□□ 0.01
AP000842.3-201ENST00000564354 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
AP000842.3-201ENST00000564354 OXER1Q8TDS5 423 aa15.01□□□□□ -0.01
AP000842.3-201ENST00000564354 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
AP000842.3-201ENST00000564354 NKX1-1Q15270 411 aaPredicted RBP14.98□□□□□ -0.01
AP000842.3-201ENST00000564354 KCNK17Q96T54 332 aa14.98□□□□□ -0.01
AP000842.3-201ENST00000564354 KCTD12Q96CX2 325 aaKnown RBP14.97□□□□□ -0.01
AP000842.3-201ENST00000564354 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
AP000842.3-201ENST00000564354 CRISPLD2Q9H0B8 497 aa14.97□□□□□ -0.01
AP000842.3-201ENST00000564354 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
AP000842.3-201ENST00000564354 VPS9D1Q9Y2B5 631 aa14.94□□□□□ -0.02
AP000842.3-201ENST00000564354 RYDENQ9NUL5 291 aaKnown RBP14.93□□□□□ -0.02
AP000842.3-201ENST00000564354 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
AP000842.3-201ENST00000564354 ZNF454Q8N9F8 522 aa14.91□□□□□ -0.02
AP000842.3-201ENST00000564354 SLC4A5Q9BY07 1137 aa14.91□□□□□ -0.02
AP000842.3-201ENST00000564354 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
AP000842.3-201ENST00000564354 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
AP000842.3-201ENST00000564354 FOSBP53539 338 aa14.87□□□□□ -0.03
AP000842.3-201ENST00000564354 ANO8Q9HCE9 1232 aaPredicted RBP14.84□□□□□ -0.03
AP000842.3-201ENST00000564354 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
AP000842.3-201ENST00000564354 BHMG1C9JSJ3 638 aaPredicted RBP14.83□□□□□ -0.04
AP000842.3-201ENST00000564354 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
AP000842.3-201ENST00000564354 PTPREP23469 700 aa14.81□□□□□ -0.04
AP000842.3-201ENST00000564354 PDE4AP27815 886 aa14.81□□□□□ -0.04
AP000842.3-201ENST00000564354 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
AP000842.3-201ENST00000564354 ZBED2Q9BTP6 218 aa14.8□□□□□ -0.04
AP000842.3-201ENST00000564354 PTPN5P54829 565 aa14.79□□□□□ -0.04
AP000842.3-201ENST00000564354 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
AP000842.3-201ENST00000564354 THSD4Q6ZMP0 1018 aa14.77□□□□□ -0.05
AP000842.3-201ENST00000564354 EVI5O60447 810 aa14.76□□□□□ -0.05
AP000842.3-201ENST00000564354 ZDHHC16Q969W1 377 aa14.74□□□□□ -0.05
AP000842.3-201ENST00000564354 ADAM33Q9BZ11 813 aa14.73□□□□□ -0.05
AP000842.3-201ENST00000564354 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
AP000842.3-201ENST00000564354 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
AP000842.3-201ENST00000564354 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
AP000842.3-201ENST00000564354 WNT2BQ93097 391 aa14.7□□□□□ -0.06
AP000842.3-201ENST00000564354 DDX27Q96GQ7 796 aaKnown RBP14.7□□□□□ -0.06
AP000842.3-201ENST00000564354 GOLGA8CPA6NN73 597 aa14.69□□□□□ -0.06
AP000842.3-201ENST00000564354 RGS20O76081 388 aa14.69□□□□□ -0.06
AP000842.3-201ENST00000564354 MFSD10Q14728 455 aa14.69□□□□□ -0.06
AP000842.3-201ENST00000564354 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
AP000842.3-201ENST00000564354 NBPF3Q9H094 633 aa14.67□□□□□ -0.06
AP000842.3-201ENST00000564354 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
AP000842.3-201ENST00000564354 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
AP000842.3-201ENST00000564354 A0A0G2JS52 829 aa14.62□□□□□ -0.07
AP000842.3-201ENST00000564354 PPP1R3GB7ZBB8 358 aa14.62□□□□□ -0.07
AP000842.3-201ENST00000564354 PCDHGA10Q9Y5H3 936 aa14.61□□□□□ -0.07
AP000842.3-201ENST00000564354 RABGEF1Q9UJ41 708 aa14.58□□□□□ -0.08
AP000842.3-201ENST00000564354 COL9A1P20849 921 aa14.54□□□□□ -0.08
AP000842.3-201ENST00000564354 PROX2Q3B8N5 592 aa14.54□□□□□ -0.08
AP000842.3-201ENST00000564354 FBXW7Q969H0 707 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms