RNA–Protein interactions for RNA: ENST00000564199.1

LINC02240-201, Transcript of long intergenic non-protein coding RNA 2240, humanhuman

TSL 2 BASIC

Gene LINC02240, Length 1,336 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02240-201ENST00000564199 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
LINC02240-201ENST00000564199 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
LINC02240-201ENST00000564199 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
LINC02240-201ENST00000564199 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
LINC02240-201ENST00000564199 NLRP6P59044 892 aa12.77□□□□□ -0.37
LINC02240-201ENST00000564199 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
LINC02240-201ENST00000564199 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
LINC02240-201ENST00000564199 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
LINC02240-201ENST00000564199 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
LINC02240-201ENST00000564199 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
LINC02240-201ENST00000564199 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
LINC02240-201ENST00000564199 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC02240-201ENST00000564199 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
LINC02240-201ENST00000564199 KIF3CO14782 793 aa12.67□□□□□ -0.38
LINC02240-201ENST00000564199 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
LINC02240-201ENST00000564199 PTGER2P43116 358 aa12.62□□□□□ -0.39
LINC02240-201ENST00000564199 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
LINC02240-201ENST00000564199 STK25O00506 426 aa12.62□□□□□ -0.39
LINC02240-201ENST00000564199 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
LINC02240-201ENST00000564199 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
LINC02240-201ENST00000564199 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC02240-201ENST00000564199 SLC34A2O95436 690 aa12.55□□□□□ -0.4
LINC02240-201ENST00000564199 NUDT7P0C024 238 aa12.55□□□□□ -0.4
LINC02240-201ENST00000564199 RGL2O15211 777 aa12.53□□□□□ -0.4
LINC02240-201ENST00000564199 PKD2Q13563 968 aa12.53□□□□□ -0.4
LINC02240-201ENST00000564199 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
LINC02240-201ENST00000564199 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
LINC02240-201ENST00000564199 PBX2P40425 430 aa12.51□□□□□ -0.41
LINC02240-201ENST00000564199 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
LINC02240-201ENST00000564199 PPP1R37O75864 691 aa12.47□□□□□ -0.41
LINC02240-201ENST00000564199 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
LINC02240-201ENST00000564199 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
LINC02240-201ENST00000564199 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
LINC02240-201ENST00000564199 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
LINC02240-201ENST00000564199 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
LINC02240-201ENST00000564199 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
LINC02240-201ENST00000564199 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
LINC02240-201ENST00000564199 FOXK1P85037 733 aa12.33□□□□□ -0.44
LINC02240-201ENST00000564199 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
LINC02240-201ENST00000564199 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
LINC02240-201ENST00000564199 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
LINC02240-201ENST00000564199 TK2O00142 265 aa12.28□□□□□ -0.44
LINC02240-201ENST00000564199 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
LINC02240-201ENST00000564199 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
LINC02240-201ENST00000564199 HRO43593 1189 aa12.27□□□□□ -0.45
LINC02240-201ENST00000564199 DSG2Q14126 1118 aa12.26□□□□□ -0.45
LINC02240-201ENST00000564199 PSEN2P49810 448 aa12.25□□□□□ -0.45
LINC02240-201ENST00000564199 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
LINC02240-201ENST00000564199 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
LINC02240-201ENST00000564199 TBC1D12O60347 775 aa12.18□□□□□ -0.46
LINC02240-201ENST00000564199 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
LINC02240-201ENST00000564199 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
LINC02240-201ENST00000564199 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
LINC02240-201ENST00000564199 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
LINC02240-201ENST00000564199 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
LINC02240-201ENST00000564199 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
LINC02240-201ENST00000564199 CRISPLD2Q9H0B8 497 aa12.11□□□□□ -0.47
LINC02240-201ENST00000564199 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
LINC02240-201ENST00000564199 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC02240-201ENST00000564199 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
LINC02240-201ENST00000564199 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
LINC02240-201ENST00000564199 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
LINC02240-201ENST00000564199 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
LINC02240-201ENST00000564199 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
LINC02240-201ENST00000564199 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
LINC02240-201ENST00000564199 FOSBP53539 338 aa12.04□□□□□ -0.48
LINC02240-201ENST00000564199 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
LINC02240-201ENST00000564199 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
LINC02240-201ENST00000564199 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
LINC02240-201ENST00000564199 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
LINC02240-201ENST00000564199 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
LINC02240-201ENST00000564199 PTPREP23469 700 aa11.97□□□□□ -0.49
LINC02240-201ENST00000564199 PTPN5P54829 565 aa11.97□□□□□ -0.49
LINC02240-201ENST00000564199 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
LINC02240-201ENST00000564199 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.49
LINC02240-201ENST00000564199 PDE4AP27815 886 aa11.95□□□□□ -0.5
LINC02240-201ENST00000564199 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
LINC02240-201ENST00000564199 EVI5O60447 810 aa11.94□□□□□ -0.5
LINC02240-201ENST00000564199 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
LINC02240-201ENST00000564199 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
LINC02240-201ENST00000564199 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
LINC02240-201ENST00000564199 MFSD10Q14728 455 aa11.89□□□□□ -0.51
LINC02240-201ENST00000564199 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
LINC02240-201ENST00000564199 WNT2BQ93097 391 aa11.88□□□□□ -0.51
LINC02240-201ENST00000564199 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
LINC02240-201ENST00000564199 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
LINC02240-201ENST00000564199 RGS20O76081 388 aa11.87□□□□□ -0.51
LINC02240-201ENST00000564199 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
LINC02240-201ENST00000564199 NBPF3Q9H094 633 aa11.86□□□□□ -0.51
LINC02240-201ENST00000564199 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
LINC02240-201ENST00000564199 A0A0G2JS52 829 aa11.85□□□□□ -0.51
LINC02240-201ENST00000564199 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
LINC02240-201ENST00000564199 PCDHGA10Q9Y5H3 936 aa11.83□□□□□ -0.52
LINC02240-201ENST00000564199 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
LINC02240-201ENST00000564199 COL9A1P20849 921 aa11.79□□□□□ -0.52
LINC02240-201ENST00000564199 PROX2Q3B8N5 592 aa11.79□□□□□ -0.52
LINC02240-201ENST00000564199 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
LINC02240-201ENST00000564199 CADPS2Q86UW7 1296 aa11.76□□□□□ -0.53
LINC02240-201ENST00000564199 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
LINC02240-201ENST00000564199 FBXW7Q969H0 707 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms