RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
LINC01416-201ENST00000563553 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
LINC01416-201ENST00000563553 CHGAP10645 457 aaKnown RBP8.57□□□□□ -1.04
LINC01416-201ENST00000563553 EMP3P54852 163 aa8.56□□□□□ -1.04
LINC01416-201ENST00000563553 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
LINC01416-201ENST00000563553 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
LINC01416-201ENST00000563553 DOK7Q18PE1 504 aa8.54□□□□□ -1.04
LINC01416-201ENST00000563553 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
LINC01416-201ENST00000563553 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
LINC01416-201ENST00000563553 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
LINC01416-201ENST00000563553 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
LINC01416-201ENST00000563553 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
LINC01416-201ENST00000563553 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
LINC01416-201ENST00000563553 KHSRPQ92945 711 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC01416-201ENST00000563553 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
LINC01416-201ENST00000563553 ARSIQ5FYB1 569 aa8.46□□□□□ -1.05
LINC01416-201ENST00000563553 RIMBP2O15034 1052 aa8.45□□□□□ -1.06
LINC01416-201ENST00000563553 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
LINC01416-201ENST00000563553 SPNS2Q8IVW8 549 aa8.44□□□□□ -1.06
LINC01416-201ENST00000563553 SLC34A2O95436 690 aa8.43□□□□□ -1.06
LINC01416-201ENST00000563553 VARS2Q5ST30 1063 aaKnown RBP8.43□□□□□ -1.06
LINC01416-201ENST00000563553 TMC2Q8TDI7 906 aa8.42□□□□□ -1.06
LINC01416-201ENST00000563553 ERBB3P21860 1342 aa8.42□□□□□ -1.06
LINC01416-201ENST00000563553 GPHNQ9NQX3 736 aaPredicted RBP8.41□□□□□ -1.06
LINC01416-201ENST00000563553 FOXK1P85037 733 aa8.41□□□□□ -1.06
LINC01416-201ENST00000563553 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
LINC01416-201ENST00000563553 DSG2Q14126 1118 aa8.4□□□□□ -1.06
LINC01416-201ENST00000563553 PCDHGA4Q9Y5G9 962 aa8.39□□□□□ -1.07
LINC01416-201ENST00000563553 MMRN1Q13201 1228 aa8.38□□□□□ -1.07
LINC01416-201ENST00000563553 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
LINC01416-201ENST00000563553 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
LINC01416-201ENST00000563553 NUDT7P0C024 238 aa8.38□□□□□ -1.07
LINC01416-201ENST00000563553 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
LINC01416-201ENST00000563553 PLPP6Q8IY26 295 aa8.36□□□□□ -1.07
LINC01416-201ENST00000563553 ZNF687Q8N1G0 1237 aa8.36□□□□□ -1.07
LINC01416-201ENST00000563553 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
LINC01416-201ENST00000563553 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
LINC01416-201ENST00000563553 POTEEQ6S8J3 1075 aa8.35□□□□□ -1.07
LINC01416-201ENST00000563553 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.08
LINC01416-201ENST00000563553 RYDENQ9NUL5 291 aaKnown RBP8.34□□□□□ -1.08
LINC01416-201ENST00000563553 LHX6Q9UPM6 363 aa8.34□□□□□ -1.08
LINC01416-201ENST00000563553 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
LINC01416-201ENST00000563553 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
LINC01416-201ENST00000563553 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
LINC01416-201ENST00000563553 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
LINC01416-201ENST00000563553 MFSD10Q14728 455 aa8.26□□□□□ -1.09
LINC01416-201ENST00000563553 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
LINC01416-201ENST00000563553 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC01416-201ENST00000563553 PDE4AP27815 886 aa8.23□□□□□ -1.09
LINC01416-201ENST00000563553 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC01416-201ENST00000563553 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
LINC01416-201ENST00000563553 BBXQ8WY36 941 aaPredicted RBP8.23□□□□□ -1.09
LINC01416-201ENST00000563553 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
LINC01416-201ENST00000563553 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.09
LINC01416-201ENST00000563553 PBX2P40425 430 aa8.2□□□□□ -1.1
LINC01416-201ENST00000563553 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
LINC01416-201ENST00000563553 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
LINC01416-201ENST00000563553 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
LINC01416-201ENST00000563553 PSEN2P49810 448 aa8.17□□□□□ -1.1
LINC01416-201ENST00000563553 PSDA5PKW4 1024 aaPredicted RBP8.17□□□□□ -1.1
LINC01416-201ENST00000563553 TBC1D12O60347 775 aa8.17□□□□□ -1.1
LINC01416-201ENST00000563553 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
LINC01416-201ENST00000563553 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
LINC01416-201ENST00000563553 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
LINC01416-201ENST00000563553 CAMK2BQ13554 666 aa8.15□□□□□ -1.1
LINC01416-201ENST00000563553 FOSBP53539 338 aa8.14□□□□□ -1.11
LINC01416-201ENST00000563553 EVI5O60447 810 aa8.14□□□□□ -1.11
LINC01416-201ENST00000563553 PPP4R3BQ5MIZ7 849 aa8.14□□□□□ -1.11
LINC01416-201ENST00000563553 ADGRD1Q6QNK2 874 aa8.13□□□□□ -1.11
LINC01416-201ENST00000563553 HRO43593 1189 aa8.12□□□□□ -1.11
LINC01416-201ENST00000563553 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
LINC01416-201ENST00000563553 PTGER2P43116 358 aa8.11□□□□□ -1.11
LINC01416-201ENST00000563553 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
LINC01416-201ENST00000563553 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
LINC01416-201ENST00000563553 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
LINC01416-201ENST00000563553 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
LINC01416-201ENST00000563553 TK2O00142 265 aa8.08□□□□□ -1.12
LINC01416-201ENST00000563553 ADAM33Q9BZ11 813 aa8.08□□□□□ -1.12
LINC01416-201ENST00000563553 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
LINC01416-201ENST00000563553 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
LINC01416-201ENST00000563553 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
LINC01416-201ENST00000563553 DPYSL4O14531 572 aa8.07□□□□□ -1.12
LINC01416-201ENST00000563553 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.06□□□□□ -1.12
LINC01416-201ENST00000563553 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
LINC01416-201ENST00000563553 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
LINC01416-201ENST00000563553 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
LINC01416-201ENST00000563553 ZBED2Q9BTP6 218 aa8.03□□□□□ -1.12
LINC01416-201ENST00000563553 BHMG1C9JSJ3 638 aaPredicted RBP8.02□□□□□ -1.13
LINC01416-201ENST00000563553 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
LINC01416-201ENST00000563553 COL9A1P20849 921 aa8.01□□□□□ -1.13
LINC01416-201ENST00000563553 PTPREP23469 700 aa8.01□□□□□ -1.13
LINC01416-201ENST00000563553 PDIA6Q15084 440 aa8□□□□□ -1.13
LINC01416-201ENST00000563553 PHF14O94880 888 aa8□□□□□ -1.13
LINC01416-201ENST00000563553 ARIH1Q9Y4X5 557 aaPredicted RBP7.98□□□□□ -1.13
LINC01416-201ENST00000563553 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
LINC01416-201ENST00000563553 PPP1R3GB7ZBB8 358 aa7.97□□□□□ -1.13
LINC01416-201ENST00000563553 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
LINC01416-201ENST00000563553 PROX2Q3B8N5 592 aa7.97□□□□□ -1.13
LINC01416-201ENST00000563553 DDX12PQ92771 950 aa7.96□□□□□ -1.13
LINC01416-201ENST00000563553 TSHZ2Q9NRE2 1034 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms