RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDH1-205ENST00000562836 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
CDH1-205ENST00000562836 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
CDH1-205ENST00000562836 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
CDH1-205ENST00000562836 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
CDH1-205ENST00000562836 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
CDH1-205ENST00000562836 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
CDH1-205ENST00000562836 PSEN1P49768 467 aa12.41□□□□□ -0.42
CDH1-205ENST00000562836 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
CDH1-205ENST00000562836 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
CDH1-205ENST00000562836 MPNDQ8N594 471 aa12.38□□□□□ -0.43
CDH1-205ENST00000562836 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
CDH1-205ENST00000562836 IPO9Q96P70 1041 aaKnown RBP12.38□□□□□ -0.43
CDH1-205ENST00000562836 ANAPC15P60006 121 aa12.37□□□□□ -0.43
CDH1-205ENST00000562836 DNTTIP2Q5QJE6 756 aaKnown RBP12.37□□□□□ -0.43
CDH1-205ENST00000562836 ZNF428Q96B54 188 aa12.37□□□□□ -0.43
CDH1-205ENST00000562836 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
CDH1-205ENST00000562836 PHF14O94880 888 aa12.36□□□□□ -0.43
CDH1-205ENST00000562836 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
CDH1-205ENST00000562836 SMAP1Q8IYB5 467 aaPredicted RBP12.36□□□□□ -0.43
CDH1-205ENST00000562836 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
CDH1-205ENST00000562836 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
CDH1-205ENST00000562836 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
CDH1-205ENST00000562836 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
CDH1-205ENST00000562836 DNAJC2Q99543 621 aaKnown RBP12.33□□□□□ -0.44
CDH1-205ENST00000562836 AXDND1Q5T1B0 1012 aaPredicted RBP12.32□□□□□ -0.44
CDH1-205ENST00000562836 ZBTB22O15209 634 aa12.31□□□□□ -0.44
CDH1-205ENST00000562836 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
CDH1-205ENST00000562836 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
CDH1-205ENST00000562836 FBLN2P98095 1184 aa12.3□□□□□ -0.44
CDH1-205ENST00000562836 SH3BP1Q9Y3L3 701 aa12.3□□□□□ -0.44
CDH1-205ENST00000562836 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDH1-205ENST00000562836 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
CDH1-205ENST00000562836 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
CDH1-205ENST00000562836 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
CDH1-205ENST00000562836 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CDH1-205ENST00000562836 IRF6O14896 467 aa12.27□□□□□ -0.44
CDH1-205ENST00000562836 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.45
CDH1-205ENST00000562836 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
CDH1-205ENST00000562836 EGFL6Q8IUX8 553 aa12.26□□□□□ -0.45
CDH1-205ENST00000562836 SETQ01105 290 aaPredicted RBP12.26□□□□□ -0.45
CDH1-205ENST00000562836 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
CDH1-205ENST00000562836 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
CDH1-205ENST00000562836 DMTNQ08495 405 aa12.25□□□□□ -0.45
CDH1-205ENST00000562836 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
CDH1-205ENST00000562836 EP400NLQ6ZTU2 488 aa12.25□□□□□ -0.45
CDH1-205ENST00000562836 RGL3Q3MIN7 710 aa12.24□□□□□ -0.45
CDH1-205ENST00000562836 ZBTB9Q96C00 473 aa12.24□□□□□ -0.45
CDH1-205ENST00000562836 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
CDH1-205ENST00000562836 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
CDH1-205ENST00000562836 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
CDH1-205ENST00000562836 CLCN1P35523 988 aa12.22□□□□□ -0.45
CDH1-205ENST00000562836 TPM2P07951 284 aa12.2□□□□□ -0.46
CDH1-205ENST00000562836 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
CDH1-205ENST00000562836 KDM4AO75164 1064 aa12.18□□□□□ -0.46
CDH1-205ENST00000562836 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
CDH1-205ENST00000562836 RALBP1Q15311 655 aa12.17□□□□□ -0.46
CDH1-205ENST00000562836 ABCC9O60706 1549 aa12.17□□□□□ -0.46
CDH1-205ENST00000562836 MAFGO15525 162 aa12.17□□□□□ -0.46
CDH1-205ENST00000562836 KIF20AO95235 890 aa12.14□□□□□ -0.47
CDH1-205ENST00000562836 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
CDH1-205ENST00000562836 STK26Q9P289 416 aa12.13□□□□□ -0.47
CDH1-205ENST00000562836 ZSCAN20P17040 1043 aaPredicted RBP12.13□□□□□ -0.47
CDH1-205ENST00000562836 FAM177A1Q8N128 213 aaPredicted RBP12.13□□□□□ -0.47
CDH1-205ENST00000562836 NBPF20Q3BBV1 942 aa12.12□□□□□ -0.47
CDH1-205ENST00000562836 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
CDH1-205ENST00000562836 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
CDH1-205ENST00000562836 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
CDH1-205ENST00000562836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
CDH1-205ENST00000562836 CGNQ9P2M7 1197 aaKnown RBP12.1□□□□□ -0.47
CDH1-205ENST00000562836 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
CDH1-205ENST00000562836 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
CDH1-205ENST00000562836 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
CDH1-205ENST00000562836 LOC102724159A0A0B4J2E5 919 aa12.08□□□□□ -0.48
CDH1-205ENST00000562836 PWP2Q15269 919 aaKnown RBP12.08□□□□□ -0.48
CDH1-205ENST00000562836 NFKBIBQ15653 356 aa12.08□□□□□ -0.48
CDH1-205ENST00000562836 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.48
CDH1-205ENST00000562836 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.48
CDH1-205ENST00000562836 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
CDH1-205ENST00000562836 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
CDH1-205ENST00000562836 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
CDH1-205ENST00000562836 GEMIN8Q9NWZ8 242 aaKnown RBP12.08□□□□□ -0.48
CDH1-205ENST00000562836 MLECQ14165 292 aa12.07□□□□□ -0.48
CDH1-205ENST00000562836 SGSM3Q96HU1 749 aa12.07□□□□□ -0.48
CDH1-205ENST00000562836 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
CDH1-205ENST00000562836 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
CDH1-205ENST00000562836 LETM1O95202 739 aaPredicted RBP12.06□□□□□ -0.48
CDH1-205ENST00000562836 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
CDH1-205ENST00000562836 GOLIM4O00461 696 aa12.06□□□□□ -0.48
CDH1-205ENST00000562836 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
CDH1-205ENST00000562836 TTC36A6NLP5 189 aa12.05□□□□□ -0.48
CDH1-205ENST00000562836 TRIM44Q96DX7 344 aaPredicted RBP12.05□□□□□ -0.48
CDH1-205ENST00000562836 CEP120Q8N960 986 aa12.05□□□□□ -0.48
CDH1-205ENST00000562836 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
CDH1-205ENST00000562836 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
CDH1-205ENST00000562836 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
CDH1-205ENST00000562836 ZNF513Q8N8E2 541 aaPredicted RBP12.03□□□□□ -0.48
CDH1-205ENST00000562836 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
CDH1-205ENST00000562836 ARID4AP29374 1257 aaPredicted RBP12.02□□□□□ -0.48
CDH1-205ENST00000562836 SLC20A2Q08357 652 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms