RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 RNF25Q96BH1 459 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-202ENST00000562702 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
HDGFL3-202ENST00000562702 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
HDGFL3-202ENST00000562702 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
HDGFL3-202ENST00000562702 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-202ENST00000562702 GPR153Q6NV75 609 aa10.9□□□□□ -0.66
HDGFL3-202ENST00000562702 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-202ENST00000562702 PTGER2P43116 358 aa10.88□□□□□ -0.67
HDGFL3-202ENST00000562702 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
HDGFL3-202ENST00000562702 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
HDGFL3-202ENST00000562702 ARSIQ5FYB1 569 aa10.85□□□□□ -0.67
HDGFL3-202ENST00000562702 STK25O00506 426 aa10.83□□□□□ -0.68
HDGFL3-202ENST00000562702 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-202ENST00000562702 FBXO22Q8NEZ5 403 aa10.81□□□□□ -0.68
HDGFL3-202ENST00000562702 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
HDGFL3-202ENST00000562702 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
HDGFL3-202ENST00000562702 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
HDGFL3-202ENST00000562702 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
HDGFL3-202ENST00000562702 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
HDGFL3-202ENST00000562702 PBX2P40425 430 aa10.73□□□□□ -0.69
HDGFL3-202ENST00000562702 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.694e-6■□□□□ 8.2
HDGFL3-202ENST00000562702 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDGFL3-202ENST00000562702 KIF3CO14782 793 aa10.71□□□□□ -0.69
HDGFL3-202ENST00000562702 NUDT7P0C024 238 aa10.7□□□□□ -0.7
HDGFL3-202ENST00000562702 SLC34A2O95436 690 aa10.69□□□□□ -0.7
HDGFL3-202ENST00000562702 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
HDGFL3-202ENST00000562702 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
HDGFL3-202ENST00000562702 LHX6Q9UPM6 363 aa10.65□□□□□ -0.7
HDGFL3-202ENST00000562702 RGL2O15211 777 aa10.62□□□□□ -0.71
HDGFL3-202ENST00000562702 PKD2Q13563 968 aa10.59□□□□□ -0.71
HDGFL3-202ENST00000562702 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
HDGFL3-202ENST00000562702 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
HDGFL3-202ENST00000562702 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
HDGFL3-202ENST00000562702 TBC1D12O60347 775 aa10.56□□□□□ -0.72
HDGFL3-202ENST00000562702 ADGRD1Q6QNK2 874 aa10.54□□□□□ -0.72
HDGFL3-202ENST00000562702 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
HDGFL3-202ENST00000562702 PPP1R37O75864 691 aa10.53□□□□□ -0.72
HDGFL3-202ENST00000562702 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-202ENST00000562702 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
HDGFL3-202ENST00000562702 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
HDGFL3-202ENST00000562702 POTEEQ6S8J3 1075 aa10.52□□□□□ -0.73
HDGFL3-202ENST00000562702 TK2O00142 265 aa10.51□□□□□ -0.73
HDGFL3-202ENST00000562702 FOXK1P85037 733 aa10.51□□□□□ -0.73
HDGFL3-202ENST00000562702 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
HDGFL3-202ENST00000562702 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
HDGFL3-202ENST00000562702 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-202ENST00000562702 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
HDGFL3-202ENST00000562702 RYDENQ9NUL5 291 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-202ENST00000562702 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
HDGFL3-202ENST00000562702 PSEN2P49810 448 aa10.42□□□□□ -0.74
HDGFL3-202ENST00000562702 DSG2Q14126 1118 aa10.42□□□□□ -0.74
HDGFL3-202ENST00000562702 DMRTA1Q5VZB9 504 aa10.41□□□□□ -0.74
HDGFL3-202ENST00000562702 HRO43593 1189 aa10.4□□□□□ -0.74
HDGFL3-202ENST00000562702 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-202ENST00000562702 KCTD12Q96CX2 325 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-202ENST00000562702 KCNK17Q96T54 332 aa10.38□□□□□ -0.75
HDGFL3-202ENST00000562702 ZNF454Q8N9F8 522 aa10.34□□□□□ -0.75
HDGFL3-202ENST00000562702 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDGFL3-202ENST00000562702 OXER1Q8TDS5 423 aa10.33□□□□□ -0.76
HDGFL3-202ENST00000562702 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
HDGFL3-202ENST00000562702 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
HDGFL3-202ENST00000562702 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
HDGFL3-202ENST00000562702 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
HDGFL3-202ENST00000562702 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
HDGFL3-202ENST00000562702 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
HDGFL3-202ENST00000562702 PTPREP23469 700 aa10.29□□□□□ -0.76
HDGFL3-202ENST00000562702 PDE4AP27815 886 aa10.29□□□□□ -0.76
HDGFL3-202ENST00000562702 PTPN5P54829 565 aa10.28□□□□□ -0.76
HDGFL3-202ENST00000562702 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
HDGFL3-202ENST00000562702 FOSBP53539 338 aa10.25□□□□□ -0.77
HDGFL3-202ENST00000562702 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
HDGFL3-202ENST00000562702 RGS20O76081 388 aa10.23□□□□□ -0.77
HDGFL3-202ENST00000562702 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
HDGFL3-202ENST00000562702 NBPF3Q9H094 633 aa10.23□□□□□ -0.77
HDGFL3-202ENST00000562702 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
HDGFL3-202ENST00000562702 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
HDGFL3-202ENST00000562702 EVI5O60447 810 aa10.21□□□□□ -0.77
HDGFL3-202ENST00000562702 THSD4Q6ZMP0 1018 aa10.21□□□□□ -0.77
HDGFL3-202ENST00000562702 WNT2BQ93097 391 aa10.21□□□□□ -0.77
HDGFL3-202ENST00000562702 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-202ENST00000562702 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
HDGFL3-202ENST00000562702 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
HDGFL3-202ENST00000562702 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
HDGFL3-202ENST00000562702 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
HDGFL3-202ENST00000562702 DDX27Q96GQ7 796 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-202ENST00000562702 LARP6Q9BRS8 491 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-202ENST00000562702 NCKAP5LQ9HCH0 1330 aa10.16□□□□□ -0.78
HDGFL3-202ENST00000562702 ADAM33Q9BZ11 813 aa10.14□□□□□ -0.79
HDGFL3-202ENST00000562702 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
HDGFL3-202ENST00000562702 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
HDGFL3-202ENST00000562702 A0A0G2JS52 829 aa10.11□□□□□ -0.79
HDGFL3-202ENST00000562702 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
HDGFL3-202ENST00000562702 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
HDGFL3-202ENST00000562702 RABGEF1Q9UJ41 708 aa10.1□□□□□ -0.79
HDGFL3-202ENST00000562702 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
HDGFL3-202ENST00000562702 MFSD10Q14728 455 aa10.09□□□□□ -0.79
HDGFL3-202ENST00000562702 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
HDGFL3-202ENST00000562702 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
HDGFL3-202ENST00000562702 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
HDGFL3-202ENST00000562702 PHF14O94880 888 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms