RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
AC055876.4-201ENST00000562515 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
AC055876.4-201ENST00000562515 SIGLEC1Q9BZZ2 1709 aa15.78■□□□□ 0.12
AC055876.4-201ENST00000562515 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
AC055876.4-201ENST00000562515 LMTK3Q96Q04 1460 aa15.77■□□□□ 0.11
AC055876.4-201ENST00000562515 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
AC055876.4-201ENST00000562515 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
AC055876.4-201ENST00000562515 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 LRRIQ1Q96JM4 1722 aa15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 ARHGAP35Q9NRY4 1499 aa15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 PLCH2O75038 1416 aa15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 CLIP1P30622 1438 aa15.75■□□□□ 0.11
AC055876.4-201ENST00000562515 MLECQ14165 292 aa15.73■□□□□ 0.11
AC055876.4-201ENST00000562515 C9orf84Q5VXU9 1444 aa15.72■□□□□ 0.11
AC055876.4-201ENST00000562515 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.1
AC055876.4-201ENST00000562515 PREX1Q8TCU6 1659 aa15.7■□□□□ 0.1
AC055876.4-201ENST00000562515 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
AC055876.4-201ENST00000562515 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
AC055876.4-201ENST00000562515 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
AC055876.4-201ENST00000562515 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
AC055876.4-201ENST00000562515 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
AC055876.4-201ENST00000562515 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
AC055876.4-201ENST00000562515 ATP10AO60312 1499 aa15.68■□□□□ 0.1
AC055876.4-201ENST00000562515 KDM5CP41229 1560 aa15.66■□□□□ 0.1
AC055876.4-201ENST00000562515 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
AC055876.4-201ENST00000562515 HSPA2P54652 639 aa15.66■□□□□ 0.1
AC055876.4-201ENST00000562515 ARHGEF12Q9NZN5 1544 aa15.66■□□□□ 0.1
AC055876.4-201ENST00000562515 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
AC055876.4-201ENST00000562515 DIP2CQ9Y2E4 1556 aa15.65■□□□□ 0.1
AC055876.4-201ENST00000562515 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
AC055876.4-201ENST00000562515 ABCC1P33527 1531 aa15.63■□□□□ 0.09
AC055876.4-201ENST00000562515 CDC42BPAQ5VT25 1732 aa15.63■□□□□ 0.09
AC055876.4-201ENST00000562515 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
AC055876.4-201ENST00000562515 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
AC055876.4-201ENST00000562515 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
AC055876.4-201ENST00000562515 C3P01024 1663 aa15.58■□□□□ 0.08
AC055876.4-201ENST00000562515 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
AC055876.4-201ENST00000562515 ESF1Q9H501 851 aaKnown RBP15.57■□□□□ 0.08
AC055876.4-201ENST00000562515 UHRF1BP1Q6BDS2 1440 aa15.57■□□□□ 0.08
AC055876.4-201ENST00000562515 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
AC055876.4-201ENST00000562515 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
AC055876.4-201ENST00000562515 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
AC055876.4-201ENST00000562515 SYCP2Q9BX26 1530 aa15.53■□□□□ 0.08
AC055876.4-201ENST00000562515 SETD1BQ9UPS6 1966 aaKnown RBP15.53■□□□□ 0.08
AC055876.4-201ENST00000562515 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
AC055876.4-201ENST00000562515 STRCQ7RTU9 1775 aa15.52■□□□□ 0.08
AC055876.4-201ENST00000562515 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.08
AC055876.4-201ENST00000562515 SAMD9LQ8IVG5 1584 aa15.52■□□□□ 0.07
AC055876.4-201ENST00000562515 AGLP35573 1532 aa15.52■□□□□ 0.07
AC055876.4-201ENST00000562515 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
AC055876.4-201ENST00000562515 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
AC055876.4-201ENST00000562515 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
AC055876.4-201ENST00000562515 CNTLNQ9NXG0 1405 aa15.47■□□□□ 0.07
AC055876.4-201ENST00000562515 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
AC055876.4-201ENST00000562515 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
AC055876.4-201ENST00000562515 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.07
AC055876.4-201ENST00000562515 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
AC055876.4-201ENST00000562515 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
AC055876.4-201ENST00000562515 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
AC055876.4-201ENST00000562515 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
AC055876.4-201ENST00000562515 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
AC055876.4-201ENST00000562515 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
AC055876.4-201ENST00000562515 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
AC055876.4-201ENST00000562515 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
AC055876.4-201ENST00000562515 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
AC055876.4-201ENST00000562515 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
AC055876.4-201ENST00000562515 ZNF142P52746 1687 aaPredicted RBP15.4■□□□□ 0.06
AC055876.4-201ENST00000562515 PLXNC1O60486 1568 aa15.4■□□□□ 0.06
AC055876.4-201ENST00000562515 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
AC055876.4-201ENST00000562515 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
AC055876.4-201ENST00000562515 HNRNPMP52272 730 aaKnown RBP eCLIP15.39■□□□□ 0.05
AC055876.4-201ENST00000562515 PTPRTO14522 1441 aa15.39■□□□□ 0.05
AC055876.4-201ENST00000562515 A2MP01023 1474 aa15.39■□□□□ 0.05
AC055876.4-201ENST00000562515 NPATQ14207 1427 aa15.37■□□□□ 0.05
AC055876.4-201ENST00000562515 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
AC055876.4-201ENST00000562515 KIAA1107Q9UPP5 1409 aa15.37■□□□□ 0.05
AC055876.4-201ENST00000562515 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
AC055876.4-201ENST00000562515 ZMYM3Q14202 1370 aa15.33■□□□□ 0.04
AC055876.4-201ENST00000562515 GGT6Q6P531 493 aa15.32■□□□□ 0.04
AC055876.4-201ENST00000562515 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
AC055876.4-201ENST00000562515 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
AC055876.4-201ENST00000562515 LTBP4Q8N2S1 1624 aa15.31■□□□□ 0.04
AC055876.4-201ENST00000562515 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
AC055876.4-201ENST00000562515 IQSEC2Q5JU85 1478 aa15.3■□□□□ 0.04
AC055876.4-201ENST00000562515 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
AC055876.4-201ENST00000562515 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
AC055876.4-201ENST00000562515 PLA2R1Q13018 1463 aa15.28■□□□□ 0.04
AC055876.4-201ENST00000562515 CCDC141Q6ZP82 1450 aa15.28■□□□□ 0.04
AC055876.4-201ENST00000562515 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
AC055876.4-201ENST00000562515 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
AC055876.4-201ENST00000562515 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
AC055876.4-201ENST00000562515 NCOA2Q15596 1464 aa15.26■□□□□ 0.03
AC055876.4-201ENST00000562515 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
AC055876.4-201ENST00000562515 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
AC055876.4-201ENST00000562515 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
AC055876.4-201ENST00000562515 DNMT1P26358 1616 aaKnown RBP15.24■□□□□ 0.03
AC055876.4-201ENST00000562515 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
AC055876.4-201ENST00000562515 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
AC055876.4-201ENST00000562515 ZNF335Q9H4Z2 1342 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms