RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 ADGRL1O94910 1474 aa17.44■□□□□ 0.38
SNAPC5-204ENST00000562411 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
SNAPC5-204ENST00000562411 AKNAQ7Z591 1439 aa17.43■□□□□ 0.38
SNAPC5-204ENST00000562411 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
SNAPC5-204ENST00000562411 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
SNAPC5-204ENST00000562411 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
SNAPC5-204ENST00000562411 ABCC1P33527 1531 aa17.4■□□□□ 0.38
SNAPC5-204ENST00000562411 ZMYM4Q5VZL5 1548 aa17.39■□□□□ 0.37
SNAPC5-204ENST00000562411 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
SNAPC5-204ENST00000562411 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
SNAPC5-204ENST00000562411 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
SNAPC5-204ENST00000562411 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
SNAPC5-204ENST00000562411 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
SNAPC5-204ENST00000562411 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
SNAPC5-204ENST00000562411 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
SNAPC5-204ENST00000562411 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
SNAPC5-204ENST00000562411 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
SNAPC5-204ENST00000562411 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
SNAPC5-204ENST00000562411 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.36
SNAPC5-204ENST00000562411 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
SNAPC5-204ENST00000562411 KDM5CP41229 1560 aa17.32■□□□□ 0.36
SNAPC5-204ENST00000562411 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
SNAPC5-204ENST00000562411 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
SNAPC5-204ENST00000562411 ARHGEF12Q9NZN5 1544 aa17.29■□□□□ 0.36
SNAPC5-204ENST00000562411 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.36
SNAPC5-204ENST00000562411 ABCA6Q8N139 1617 aa17.27■□□□□ 0.36
SNAPC5-204ENST00000562411 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
SNAPC5-204ENST00000562411 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
SNAPC5-204ENST00000562411 PLEKHH2Q8IVE3 1493 aa17.25■□□□□ 0.35
SNAPC5-204ENST00000562411 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
SNAPC5-204ENST00000562411 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
SNAPC5-204ENST00000562411 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
SNAPC5-204ENST00000562411 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
SNAPC5-204ENST00000562411 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
SNAPC5-204ENST00000562411 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
SNAPC5-204ENST00000562411 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
SNAPC5-204ENST00000562411 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
SNAPC5-204ENST00000562411 APLP2Q06481 763 aa17.22■□□□□ 0.35
SNAPC5-204ENST00000562411 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
SNAPC5-204ENST00000562411 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
SNAPC5-204ENST00000562411 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
SNAPC5-204ENST00000562411 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
SNAPC5-204ENST00000562411 KIAA1107Q9UPP5 1409 aa17.19■□□□□ 0.34
SNAPC5-204ENST00000562411 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
SNAPC5-204ENST00000562411 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
SNAPC5-204ENST00000562411 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
SNAPC5-204ENST00000562411 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
SNAPC5-204ENST00000562411 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
SNAPC5-204ENST00000562411 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
SNAPC5-204ENST00000562411 ATP10AO60312 1499 aa17.16■□□□□ 0.34
SNAPC5-204ENST00000562411 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
SNAPC5-204ENST00000562411 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
SNAPC5-204ENST00000562411 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
SNAPC5-204ENST00000562411 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
SNAPC5-204ENST00000562411 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
SNAPC5-204ENST00000562411 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
SNAPC5-204ENST00000562411 PTPN23Q9H3S7 1636 aa17.14■□□□□ 0.33
SNAPC5-204ENST00000562411 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
SNAPC5-204ENST00000562411 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
SNAPC5-204ENST00000562411 MBD5Q9P267 1494 aa17.14■□□□□ 0.33
SNAPC5-204ENST00000562411 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
SNAPC5-204ENST00000562411 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNAPC5-204ENST00000562411 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
SNAPC5-204ENST00000562411 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
SNAPC5-204ENST00000562411 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
SNAPC5-204ENST00000562411 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
SNAPC5-204ENST00000562411 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
SNAPC5-204ENST00000562411 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
SNAPC5-204ENST00000562411 AGLP35573 1532 aa17.06■□□□□ 0.32
SNAPC5-204ENST00000562411 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
SNAPC5-204ENST00000562411 A2MP01023 1474 aa17.04■□□□□ 0.32
SNAPC5-204ENST00000562411 PTPRMP28827 1452 aa17.04■□□□□ 0.32
SNAPC5-204ENST00000562411 MLECQ14165 292 aa17.03■□□□□ 0.32
SNAPC5-204ENST00000562411 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
SNAPC5-204ENST00000562411 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
SNAPC5-204ENST00000562411 DAPK1P53355 1430 aa16.98■□□□□ 0.31
SNAPC5-204ENST00000562411 C3P01024 1663 aa16.97■□□□□ 0.31
SNAPC5-204ENST00000562411 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
SNAPC5-204ENST00000562411 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.31
SNAPC5-204ENST00000562411 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
SNAPC5-204ENST00000562411 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
SNAPC5-204ENST00000562411 ABCC5O15440 1437 aa16.96■□□□□ 0.3
SNAPC5-204ENST00000562411 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
SNAPC5-204ENST00000562411 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
SNAPC5-204ENST00000562411 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
SNAPC5-204ENST00000562411 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
SNAPC5-204ENST00000562411 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
SNAPC5-204ENST00000562411 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
SNAPC5-204ENST00000562411 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
SNAPC5-204ENST00000562411 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
SNAPC5-204ENST00000562411 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
SNAPC5-204ENST00000562411 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
SNAPC5-204ENST00000562411 KDM5DQ9BY66 1539 aa16.89■□□□□ 0.29
SNAPC5-204ENST00000562411 KIF15Q9NS87 1388 aa16.89■□□□□ 0.29
SNAPC5-204ENST00000562411 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
SNAPC5-204ENST00000562411 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
SNAPC5-204ENST00000562411 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
SNAPC5-204ENST00000562411 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
SNAPC5-204ENST00000562411 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
SNAPC5-204ENST00000562411 CEP152O94986 1710 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms