RNA–Protein interactions for RNA: ENST00000561334.1

SNX22-207, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 2,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-207ENST00000561334 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
SNX22-207ENST00000561334 PLEKHD1A6NEE1 506 aa23.31■■□□□ 1.32
SNX22-207ENST00000561334 CHIC2Q9UKJ5 165 aa23.3■■□□□ 1.32
SNX22-207ENST00000561334 GCC2Q8IWJ2 1684 aa23.3■■□□□ 1.32
SNX22-207ENST00000561334 DNMT1P26358 1616 aaKnown RBP23.29■■□□□ 1.32
SNX22-207ENST00000561334 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
SNX22-207ENST00000561334 DAPK1P53355 1430 aa23.27■■□□□ 1.32
SNX22-207ENST00000561334 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.31
SNX22-207ENST00000561334 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
SNX22-207ENST00000561334 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
SNX22-207ENST00000561334 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
SNX22-207ENST00000561334 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
SNX22-207ENST00000561334 CFDP1Q9UEE9 299 aaPredicted RBP23.25■■□□□ 1.31
SNX22-207ENST00000561334 ABCC5O15440 1437 aa23.25■■□□□ 1.31
SNX22-207ENST00000561334 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
SNX22-207ENST00000561334 KDM6BO15054 1643 aa23.22■■□□□ 1.31
SNX22-207ENST00000561334 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
SNX22-207ENST00000561334 PRKCSHP14314 528 aaPredicted RBP23.17■■□□□ 1.3
SNX22-207ENST00000561334 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
SNX22-207ENST00000561334 ZNF777Q9ULD5 760 aaPredicted RBP23.17■■□□□ 1.3
SNX22-207ENST00000561334 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
SNX22-207ENST00000561334 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
SNX22-207ENST00000561334 ZCCHC11Q5TAX3 1644 aaKnown RBP23.13■■□□□ 1.29
SNX22-207ENST00000561334 CDC42BPBQ9Y5S2 1711 aa23.12■■□□□ 1.29
SNX22-207ENST00000561334 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
SNX22-207ENST00000561334 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
SNX22-207ENST00000561334 PREX2Q70Z35 1606 aa23.1■■□□□ 1.29
SNX22-207ENST00000561334 TTC37Q6PGP7 1564 aa23.09■■□□□ 1.29
SNX22-207ENST00000561334 KDM5BQ9UGL1 1544 aa23.08■■□□□ 1.29
SNX22-207ENST00000561334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.28
SNX22-207ENST00000561334 DENND4BO75064 1496 aaPredicted RBP23.08■■□□□ 1.28
SNX22-207ENST00000561334 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
SNX22-207ENST00000561334 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
SNX22-207ENST00000561334 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
SNX22-207ENST00000561334 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
SNX22-207ENST00000561334 KCNH8Q96L42 1107 aa23.04■■□□□ 1.28
SNX22-207ENST00000561334 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
SNX22-207ENST00000561334 MYO5CQ9NQX4 1742 aa23.01■■□□□ 1.27
SNX22-207ENST00000561334 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
SNX22-207ENST00000561334 MBD5Q9P267 1494 aa23■■□□□ 1.27
SNX22-207ENST00000561334 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
SNX22-207ENST00000561334 ARHGEF5Q12774 1597 aa22.99■■□□□ 1.27
SNX22-207ENST00000561334 HNRNPMP52272 730 aaKnown RBP eCLIP22.98■■□□□ 1.27
SNX22-207ENST00000561334 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
SNX22-207ENST00000561334 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
SNX22-207ENST00000561334 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
SNX22-207ENST00000561334 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
SNX22-207ENST00000561334 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
SNX22-207ENST00000561334 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
SNX22-207ENST00000561334 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
SNX22-207ENST00000561334 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
SNX22-207ENST00000561334 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
SNX22-207ENST00000561334 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
SNX22-207ENST00000561334 FOXD1Q16676 465 aa22.89■■□□□ 1.26
SNX22-207ENST00000561334 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
SNX22-207ENST00000561334 PLCH2O75038 1416 aa22.88■■□□□ 1.25
SNX22-207ENST00000561334 FKBP8Q14318 412 aa22.88■■□□□ 1.25
SNX22-207ENST00000561334 PZPP20742 1482 aa22.88■■□□□ 1.25
SNX22-207ENST00000561334 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
SNX22-207ENST00000561334 BCANQ96GW7 911 aa22.87■■□□□ 1.25
SNX22-207ENST00000561334 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
SNX22-207ENST00000561334 RSPH4AQ5TD94 716 aa22.85■■□□□ 1.25
SNX22-207ENST00000561334 SLC4A1APQ9BWU0 796 aaKnown RBP22.84■■□□□ 1.25
SNX22-207ENST00000561334 ARHGEF12Q9NZN5 1544 aa22.84■■□□□ 1.25
SNX22-207ENST00000561334 KIAA1107Q9UPP5 1409 aa22.84■■□□□ 1.25
SNX22-207ENST00000561334 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
SNX22-207ENST00000561334 ANKRD30BQ9BXX2 1392 aa22.83■■□□□ 1.24
SNX22-207ENST00000561334 PLEKHH2Q8IVE3 1493 aa22.82■■□□□ 1.24
SNX22-207ENST00000561334 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
SNX22-207ENST00000561334 ABCC1P33527 1531 aa22.78■■□□□ 1.24
SNX22-207ENST00000561334 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
SNX22-207ENST00000561334 ASXL2Q76L83 1435 aa22.78■■□□□ 1.24
SNX22-207ENST00000561334 ABCA9Q8IUA7 1624 aa22.77■■□□□ 1.24
SNX22-207ENST00000561334 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
SNX22-207ENST00000561334 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
SNX22-207ENST00000561334 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
SNX22-207ENST00000561334 KDM5DQ9BY66 1539 aa22.74■■□□□ 1.23
SNX22-207ENST00000561334 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
SNX22-207ENST00000561334 NEFLP07196 543 aa22.74■■□□□ 1.23
SNX22-207ENST00000561334 NUP155O75694 1391 aa22.73■■□□□ 1.23
SNX22-207ENST00000561334 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
SNX22-207ENST00000561334 PKD2Q13563 968 aa22.71■■□□□ 1.23
SNX22-207ENST00000561334 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
SNX22-207ENST00000561334 L3MBTL2Q969R5 705 aa22.69■■□□□ 1.22
SNX22-207ENST00000561334 ANP32CO43423 234 aa22.68■■□□□ 1.22
SNX22-207ENST00000561334 TEX14Q8IWB6 1497 aa22.67■■□□□ 1.22
SNX22-207ENST00000561334 FANCAO15360 1455 aa22.67■■□□□ 1.22
SNX22-207ENST00000561334 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
SNX22-207ENST00000561334 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
SNX22-207ENST00000561334 UNC13BO14795 1591 aa22.65■■□□□ 1.22
SNX22-207ENST00000561334 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.22
SNX22-207ENST00000561334 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
SNX22-207ENST00000561334 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
SNX22-207ENST00000561334 ERICH6Q7L0X2 663 aa22.61■■□□□ 1.21
SNX22-207ENST00000561334 ZFYVE16Q7Z3T8 1539 aa22.6■■□□□ 1.21
SNX22-207ENST00000561334 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
SNX22-207ENST00000561334 SPAG9O60271 1321 aaKnown RBP22.58■■□□□ 1.21
SNX22-207ENST00000561334 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
SNX22-207ENST00000561334 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
SNX22-207ENST00000561334 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms