RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-220ENST00000560998 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
RABGGTA-220ENST00000560998 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-220ENST00000560998 DAPK1P53355 1430 aa19.62■□□□□ 0.73
RABGGTA-220ENST00000560998 ABCA8O94911 1581 aa19.61■□□□□ 0.73
RABGGTA-220ENST00000560998 NEFLP07196 543 aa19.6■□□□□ 0.73
RABGGTA-220ENST00000560998 ROCK1Q13464 1354 aa19.6■□□□□ 0.73
RABGGTA-220ENST00000560998 ABCC5O15440 1437 aa19.6■□□□□ 0.73
RABGGTA-220ENST00000560998 ITSN2Q9NZM3 1697 aa19.6■□□□□ 0.73
RABGGTA-220ENST00000560998 FKBP8Q14318 412 aa19.59■□□□□ 0.73
RABGGTA-220ENST00000560998 TONSLQ96HA7 1378 aa19.59■□□□□ 0.73
RABGGTA-220ENST00000560998 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
RABGGTA-220ENST00000560998 KIF14Q15058 1648 aa19.58■□□□□ 0.73
RABGGTA-220ENST00000560998 DENND4BO75064 1496 aaPredicted RBP19.58■□□□□ 0.72
RABGGTA-220ENST00000560998 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-220ENST00000560998 FANCIQ9NVI1 1328 aa19.57■□□□□ 0.72
RABGGTA-220ENST00000560998 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-220ENST00000560998 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
RABGGTA-220ENST00000560998 CHD1O14646 1710 aa19.54■□□□□ 0.72
RABGGTA-220ENST00000560998 ERICH6Q7L0X2 663 aa19.53■□□□□ 0.72
RABGGTA-220ENST00000560998 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
RABGGTA-220ENST00000560998 BCANQ96GW7 911 aa19.53■□□□□ 0.72
RABGGTA-220ENST00000560998 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
RABGGTA-220ENST00000560998 ATP10BO94823 1461 aa19.52■□□□□ 0.72
RABGGTA-220ENST00000560998 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
RABGGTA-220ENST00000560998 MPHOSPH9Q99550 1183 aa19.49■□□□□ 0.71
RABGGTA-220ENST00000560998 ADGBQ8N7X0 1667 aa19.49■□□□□ 0.71
RABGGTA-220ENST00000560998 CROCC2H7BZ55 1655 aa19.48■□□□□ 0.71
RABGGTA-220ENST00000560998 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
RABGGTA-220ENST00000560998 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
RABGGTA-220ENST00000560998 PLEKHD1A6NEE1 506 aa19.46■□□□□ 0.71
RABGGTA-220ENST00000560998 MSH5O43196 834 aa19.46■□□□□ 0.71
RABGGTA-220ENST00000560998 PTPRGP23470 1445 aa19.46■□□□□ 0.71
RABGGTA-220ENST00000560998 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
RABGGTA-220ENST00000560998 ADGRL2O95490 1459 aa19.44■□□□□ 0.7
RABGGTA-220ENST00000560998 NCOA1Q15788 1441 aa19.43■□□□□ 0.7
RABGGTA-220ENST00000560998 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
RABGGTA-220ENST00000560998 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
RABGGTA-220ENST00000560998 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
RABGGTA-220ENST00000560998 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.7
RABGGTA-220ENST00000560998 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.69
RABGGTA-220ENST00000560998 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
RABGGTA-220ENST00000560998 FOXD1Q16676 465 aa19.37■□□□□ 0.69
RABGGTA-220ENST00000560998 PZPP20742 1482 aa19.36■□□□□ 0.69
RABGGTA-220ENST00000560998 SHANK2Q9UPX8 1470 aa19.36■□□□□ 0.69
RABGGTA-220ENST00000560998 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
RABGGTA-220ENST00000560998 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
RABGGTA-220ENST00000560998 SLC4A1APQ9BWU0 796 aaKnown RBP19.33■□□□□ 0.69
RABGGTA-220ENST00000560998 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
RABGGTA-220ENST00000560998 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
RABGGTA-220ENST00000560998 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
RABGGTA-220ENST00000560998 ARHGEF5Q12774 1597 aa19.31■□□□□ 0.68
RABGGTA-220ENST00000560998 PREX2Q70Z35 1606 aa19.31■□□□□ 0.68
RABGGTA-220ENST00000560998 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
RABGGTA-220ENST00000560998 CDC42BPBQ9Y5S2 1711 aa19.3■□□□□ 0.68
RABGGTA-220ENST00000560998 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
RABGGTA-220ENST00000560998 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
RABGGTA-220ENST00000560998 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
RABGGTA-220ENST00000560998 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
RABGGTA-220ENST00000560998 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.68
RABGGTA-220ENST00000560998 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
RABGGTA-220ENST00000560998 KIAA1107Q9UPP5 1409 aa19.26■□□□□ 0.67
RABGGTA-220ENST00000560998 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-220ENST00000560998 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
RABGGTA-220ENST00000560998 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
RABGGTA-220ENST00000560998 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-220ENST00000560998 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
RABGGTA-220ENST00000560998 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
RABGGTA-220ENST00000560998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
RABGGTA-220ENST00000560998 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
RABGGTA-220ENST00000560998 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
RABGGTA-220ENST00000560998 ANP32CO43423 234 aa19.21■□□□□ 0.67
RABGGTA-220ENST00000560998 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.67
RABGGTA-220ENST00000560998 KIF15Q9NS87 1388 aa19.2■□□□□ 0.66
RABGGTA-220ENST00000560998 PKD2Q13563 968 aa19.19■□□□□ 0.66
RABGGTA-220ENST00000560998 NBPF8Q3BBV2 869 aa19.19■□□□□ 0.66
RABGGTA-220ENST00000560998 MYO5CQ9NQX4 1742 aa19.18■□□□□ 0.66
RABGGTA-220ENST00000560998 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
RABGGTA-220ENST00000560998 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
RABGGTA-220ENST00000560998 UHRF1BP1LA0JNW5 1464 aa19.17■□□□□ 0.66
RABGGTA-220ENST00000560998 NUP155O75694 1391 aa19.17■□□□□ 0.66
RABGGTA-220ENST00000560998 SYCP2Q9BX26 1530 aa19.17■□□□□ 0.66
RABGGTA-220ENST00000560998 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
RABGGTA-220ENST00000560998 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
RABGGTA-220ENST00000560998 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-220ENST00000560998 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
RABGGTA-220ENST00000560998 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
RABGGTA-220ENST00000560998 POLR1AO95602 1720 aaPredicted RBP19.09■□□□□ 0.65
RABGGTA-220ENST00000560998 PLXNC1O60486 1568 aa19.09■□□□□ 0.65
RABGGTA-220ENST00000560998 CCDC7Q96M83 1385 aa19.08■□□□□ 0.64
RABGGTA-220ENST00000560998 PLCH2O75038 1416 aa19.07■□□□□ 0.64
RABGGTA-220ENST00000560998 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
RABGGTA-220ENST00000560998 FAM135AQ9P2D6 1515 aa19.07■□□□□ 0.64
RABGGTA-220ENST00000560998 CNTLNQ9NXG0 1405 aa19.07■□□□□ 0.64
RABGGTA-220ENST00000560998 UNC13BO14795 1591 aa19.06■□□□□ 0.64
RABGGTA-220ENST00000560998 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
RABGGTA-220ENST00000560998 ARHGEF12Q9NZN5 1544 aa19.06■□□□□ 0.64
RABGGTA-220ENST00000560998 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
RABGGTA-220ENST00000560998 NOP58Q9Y2X3 529 aaKnown RBP19.04■□□□□ 0.64
RABGGTA-220ENST00000560998 ABCC1P33527 1531 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms