RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 TPM4P67936 248 aa17.71■□□□□ 0.43
TICRR-202ENST00000560985 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 MS4A1P11836 297 aa17.7■□□□□ 0.42
TICRR-202ENST00000560985 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
TICRR-202ENST00000560985 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
TICRR-202ENST00000560985 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
TICRR-202ENST00000560985 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
TICRR-202ENST00000560985 MLECQ14165 292 aa17.67■□□□□ 0.42
TICRR-202ENST00000560985 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
TICRR-202ENST00000560985 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
TICRR-202ENST00000560985 CCAR2Q8N163 923 aaKnown RBP17.66■□□□□ 0.42
TICRR-202ENST00000560985 POGKQ9P215 609 aa17.63■□□□□ 0.41
TICRR-202ENST00000560985 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
TICRR-202ENST00000560985 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
TICRR-202ENST00000560985 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
TICRR-202ENST00000560985 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
TICRR-202ENST00000560985 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
TICRR-202ENST00000560985 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
TICRR-202ENST00000560985 RASSF8Q8NHQ8 419 aa17.59■□□□□ 0.41
TICRR-202ENST00000560985 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
TICRR-202ENST00000560985 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
TICRR-202ENST00000560985 TPM3P06753 285 aa17.58■□□□□ 0.4
TICRR-202ENST00000560985 ZNF592Q92610 1267 aa17.57■□□□□ 0.4
TICRR-202ENST00000560985 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
TICRR-202ENST00000560985 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
TICRR-202ENST00000560985 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
TICRR-202ENST00000560985 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
TICRR-202ENST00000560985 IPO9Q96P70 1041 aaKnown RBP17.54■□□□□ 0.4
TICRR-202ENST00000560985 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
TICRR-202ENST00000560985 CFAP44Q96MT7 982 aa17.52■□□□□ 0.4
TICRR-202ENST00000560985 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
TICRR-202ENST00000560985 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
TICRR-202ENST00000560985 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
TICRR-202ENST00000560985 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
TICRR-202ENST00000560985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
TICRR-202ENST00000560985 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 TPD52L1Q16890 204 aaPredicted RBP17.48■□□□□ 0.39
TICRR-202ENST00000560985 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
TICRR-202ENST00000560985 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
TICRR-202ENST00000560985 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
TICRR-202ENST00000560985 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
TICRR-202ENST00000560985 PHF14O94880 888 aa17.46■□□□□ 0.39
TICRR-202ENST00000560985 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
TICRR-202ENST00000560985 GORABQ5T7V8 394 aa17.45■□□□□ 0.38
TICRR-202ENST00000560985 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
TICRR-202ENST00000560985 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
TICRR-202ENST00000560985 CLIP1P30622 1438 aa17.43■□□□□ 0.38
TICRR-202ENST00000560985 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
TICRR-202ENST00000560985 TMF1P82094 1093 aa17.43■□□□□ 0.38
TICRR-202ENST00000560985 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
TICRR-202ENST00000560985 GPS2Q13227 327 aa17.42■□□□□ 0.38
TICRR-202ENST00000560985 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
TICRR-202ENST00000560985 MARCH6O60337 910 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 TSR1Q2NL82 804 aaKnown RBP17.4■□□□□ 0.38
TICRR-202ENST00000560985 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
TICRR-202ENST00000560985 APPP05067 770 aa17.4■□□□□ 0.38
TICRR-202ENST00000560985 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
TICRR-202ENST00000560985 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 TEX35Q5T0J7 233 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
TICRR-202ENST00000560985 H3BQV1 296 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 GSE1Q14687 1217 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CCDC70Q6NSX1 233 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
TICRR-202ENST00000560985 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
TICRR-202ENST00000560985 BECN2A8MW95 431 aa17.35■□□□□ 0.37
TICRR-202ENST00000560985 ST18O60284 1047 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 STK26Q9P289 416 aa17.33■□□□□ 0.37
TICRR-202ENST00000560985 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.37
TICRR-202ENST00000560985 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
TICRR-202ENST00000560985 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
TICRR-202ENST00000560985 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
TICRR-202ENST00000560985 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
TICRR-202ENST00000560985 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
TICRR-202ENST00000560985 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
TICRR-202ENST00000560985 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
TICRR-202ENST00000560985 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms