RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 FBXO41Q8TF61 875 aa31.77■■■□□ 2.68
CRNDE-210ENST00000560912 KIF14Q15058 1648 aa31.76■■■□□ 2.67
CRNDE-210ENST00000560912 LRRIQ1Q96JM4 1722 aa31.75■■■□□ 2.67
CRNDE-210ENST00000560912 SCAPERQ9BY12 1400 aa31.75■■■□□ 2.67
CRNDE-210ENST00000560912 ARHGEF12Q9NZN5 1544 aa31.68■■■□□ 2.66
CRNDE-210ENST00000560912 C9orf84Q5VXU9 1444 aa31.65■■■□□ 2.66
CRNDE-210ENST00000560912 ATP10AO60312 1499 aa31.65■■■□□ 2.66
CRNDE-210ENST00000560912 KDM5CP41229 1560 aa31.64■■■□□ 2.66
CRNDE-210ENST00000560912 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
CRNDE-210ENST00000560912 UBTFP17480 764 aaKnown RBP31.62■■■□□ 2.65
CRNDE-210ENST00000560912 ZNF518AQ6AHZ1 1483 aa31.61■■■□□ 2.65
CRNDE-210ENST00000560912 PREX1Q8TCU6 1659 aa31.6■■■□□ 2.65
CRNDE-210ENST00000560912 EFCAB2Q5VUJ9 269 aa31.6■■■□□ 2.65
CRNDE-210ENST00000560912 CDC42BPBQ9Y5S2 1711 aa31.6■■■□□ 2.65
CRNDE-210ENST00000560912 ARHGAP5Q13017 1502 aa31.59■■■□□ 2.65
CRNDE-210ENST00000560912 HSPA2P54652 639 aa31.58■■■□□ 2.65
CRNDE-210ENST00000560912 CDK11AQ9UQ88 783 aaPredicted RBP31.57■■■□□ 2.64
CRNDE-210ENST00000560912 EHMT2Q96KQ7 1210 aa31.56■■■□□ 2.64
CRNDE-210ENST00000560912 ATP1B4Q9UN42 357 aaPredicted RBP31.56■■■□□ 2.64
CRNDE-210ENST00000560912 MLECQ14165 292 aa31.55■■■□□ 2.64
CRNDE-210ENST00000560912 PREX2Q70Z35 1606 aa31.55■■■□□ 2.64
CRNDE-210ENST00000560912 CLIP1P30622 1438 aa31.55■■■□□ 2.64
CRNDE-210ENST00000560912 DIP2CQ9Y2E4 1556 aa31.55■■■□□ 2.64
CRNDE-210ENST00000560912 REREQ9P2R6 1566 aa31.54■■■□□ 2.64
CRNDE-210ENST00000560912 PLPPR3Q6T4P5 718 aa31.53■■■□□ 2.64
CRNDE-210ENST00000560912 ABCA6Q8N139 1617 aa31.5■■■□□ 2.63
CRNDE-210ENST00000560912 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
CRNDE-210ENST00000560912 ABCC1P33527 1531 aa31.48■■■□□ 2.63
CRNDE-210ENST00000560912 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
CRNDE-210ENST00000560912 CCDC18Q5T9S5 1454 aa31.46■■■□□ 2.63
CRNDE-210ENST00000560912 CDC42BPAQ5VT25 1732 aa31.44■■■□□ 2.62
CRNDE-210ENST00000560912 MLH3Q9UHC1 1453 aa31.43■■■□□ 2.62
CRNDE-210ENST00000560912 SETD1BQ9UPS6 1966 aaKnown RBP31.43■■■□□ 2.62
CRNDE-210ENST00000560912 CASKIN1Q8WXD9 1431 aa31.42■■■□□ 2.62
CRNDE-210ENST00000560912 AFAP1Q8N556 730 aa31.42■■■□□ 2.62
CRNDE-210ENST00000560912 STRCQ7RTU9 1775 aa31.42■■■□□ 2.62
CRNDE-210ENST00000560912 C3P01024 1663 aa31.4■■■□□ 2.62
CRNDE-210ENST00000560912 AGLP35573 1532 aa31.39■■■□□ 2.61
CRNDE-210ENST00000560912 KIDINS220Q9ULH0 1771 aa31.38■■■□□ 2.61
CRNDE-210ENST00000560912 TRAPPC8Q9Y2L5 1435 aa31.35■■■□□ 2.61
CRNDE-210ENST00000560912 CEBPAP49715 358 aaPredicted RBP31.35■■■□□ 2.61
CRNDE-210ENST00000560912 FYCO1Q9BQS8 1478 aa31.33■■■□□ 2.61
CRNDE-210ENST00000560912 UHRF1BP1Q6BDS2 1440 aa31.32■■■□□ 2.6
CRNDE-210ENST00000560912 CERKQ8TCT0 537 aa31.31■■■□□ 2.6
CRNDE-210ENST00000560912 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.6
CRNDE-210ENST00000560912 MYT1LQ9UL68 1186 aa31.25■■■□□ 2.59
CRNDE-210ENST00000560912 MROH2AA6NES4 1674 aa31.22■■■□□ 2.59
CRNDE-210ENST00000560912 SYCP2Q9BX26 1530 aa31.21■■■□□ 2.59
CRNDE-210ENST00000560912 CNTLNQ9NXG0 1405 aa31.17■■■□□ 2.58
CRNDE-210ENST00000560912 GPATCH8Q9UKJ3 1502 aaKnown RBP31.16■■■□□ 2.58
CRNDE-210ENST00000560912 INO80Q9ULG1 1556 aaPredicted RBP31.15■■■□□ 2.58
CRNDE-210ENST00000560912 DMRT2Q9Y5R5 561 aa31.15■■■□□ 2.58
CRNDE-210ENST00000560912 PTPRTO14522 1441 aa31.14■■■□□ 2.58
CRNDE-210ENST00000560912 SUPT6HQ7KZ85 1726 aaKnown RBP31.13■■■□□ 2.57
CRNDE-210ENST00000560912 PLXNC1O60486 1568 aa31.12■■■□□ 2.57
CRNDE-210ENST00000560912 ATP7AQ04656 1500 aa31.11■■■□□ 2.57
CRNDE-210ENST00000560912 ESF1Q9H501 851 aaKnown RBP31.08■■■□□ 2.57
CRNDE-210ENST00000560912 NPATQ14207 1427 aa31.07■■■□□ 2.56
CRNDE-210ENST00000560912 NCOA1Q15788 1441 aa31.07■■■□□ 2.56
CRNDE-210ENST00000560912 KIAA1107Q9UPP5 1409 aa31.07■■■□□ 2.56
CRNDE-210ENST00000560912 PLEKHH2Q8IVE3 1493 aa31.06■■■□□ 2.56
CRNDE-210ENST00000560912 CLTCQ00610 1675 aaKnown RBP31.06■■■□□ 2.56
CRNDE-210ENST00000560912 LTBP4Q8N2S1 1624 aa31.05■■■□□ 2.56
CRNDE-210ENST00000560912 ZNF142P52746 1687 aaPredicted RBP31.04■■■□□ 2.56
CRNDE-210ENST00000560912 ZNF777Q9ULD5 760 aaPredicted RBP31.03■■■□□ 2.56
CRNDE-210ENST00000560912 SPAG9O60271 1321 aaKnown RBP31.02■■■□□ 2.56
CRNDE-210ENST00000560912 ADGBQ8N7X0 1667 aa31.01■■■□□ 2.55
CRNDE-210ENST00000560912 CAMSAP1Q5T5Y3 1602 aa31■■■□□ 2.55
CRNDE-210ENST00000560912 MYO3AQ8NEV4 1616 aa31■■■□□ 2.55
CRNDE-210ENST00000560912 A2MP01023 1474 aa30.99■■■□□ 2.55
CRNDE-210ENST00000560912 TIAM1Q13009 1591 aa30.99■■■□□ 2.55
CRNDE-210ENST00000560912 HNRNPMP52272 730 aaKnown RBP eCLIP30.98■■■□□ 2.55
CRNDE-210ENST00000560912 ZMYM3Q14202 1370 aa30.96■■■□□ 2.55
CRNDE-210ENST00000560912 CCNB3Q8WWL7 1395 aa30.96■■■□□ 2.55
CRNDE-210ENST00000560912 IQSEC2Q5JU85 1478 aa30.95■■■□□ 2.55
CRNDE-210ENST00000560912 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
CRNDE-210ENST00000560912 EHBP1L1Q8N3D4 1523 aa30.93■■■□□ 2.54
CRNDE-210ENST00000560912 MTUS2Q5JR59 1369 aa30.92■■■□□ 2.54
CRNDE-210ENST00000560912 CEP170BQ9Y4F5 1589 aaPredicted RBP30.91■■■□□ 2.54
CRNDE-210ENST00000560912 PTPRKQ15262 1439 aa30.88■■■□□ 2.53
CRNDE-210ENST00000560912 PLA2R1Q13018 1463 aa30.87■■■□□ 2.53
CRNDE-210ENST00000560912 MBD5Q9P267 1494 aa30.87■■■□□ 2.53
CRNDE-210ENST00000560912 CEP162Q5TB80 1403 aa30.82■■■□□ 2.52
CRNDE-210ENST00000560912 TCOF1Q13428 1488 aaKnown RBP30.82■■■□□ 2.52
CRNDE-210ENST00000560912 SPATA31D1Q6ZQQ2 1576 aa30.8■■■□□ 2.52
CRNDE-210ENST00000560912 RTEL1-TNFRSF6BF6WH68 1400 aa30.8■■■□□ 2.52
CRNDE-210ENST00000560912 ZNF644Q9H582 1327 aaPredicted RBP30.79■■■□□ 2.52
CRNDE-210ENST00000560912 DISP3Q9P2K9 1392 aa30.78■■■□□ 2.52
CRNDE-210ENST00000560912 PPP6R1Q9UPN7 881 aa30.77■■■□□ 2.52
CRNDE-210ENST00000560912 GGT6Q6P531 493 aa30.76■■■□□ 2.51
CRNDE-210ENST00000560912 NCKAP5LQ9HCH0 1330 aa30.75■■■□□ 2.51
CRNDE-210ENST00000560912 DNMT1P26358 1616 aaKnown RBP30.74■■■□□ 2.51
CRNDE-210ENST00000560912 FAM135AQ9P2D6 1515 aa30.73■■■□□ 2.51
CRNDE-210ENST00000560912 POLR1AO95602 1720 aaPredicted RBP30.73■■■□□ 2.51
CRNDE-210ENST00000560912 A2ML1A8K2U0 1454 aa30.72■■■□□ 2.51
CRNDE-210ENST00000560912 PKD2Q13563 968 aa30.72■■■□□ 2.51
CRNDE-210ENST00000560912 CCDC141Q6ZP82 1450 aa30.71■■■□□ 2.51
CRNDE-210ENST00000560912 DHX29Q7Z478 1369 aaKnown RBP30.71■■■□□ 2.51
CRNDE-210ENST00000560912 ZNF335Q9H4Z2 1342 aaPredicted RBP30.71■■■□□ 2.51
CRNDE-210ENST00000560912 CAMSAP2Q08AD1 1489 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms