RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 PLEKHD1A6NEE1 506 aa27.72■■■□□ 2.03
HMBOX1-215ENST00000560599 CDC42BPAQ5VT25 1732 aa27.71■■■□□ 2.03
HMBOX1-215ENST00000560599 ABCC2Q92887 1545 aa27.69■■■□□ 2.02
HMBOX1-215ENST00000560599 CFDP1Q9UEE9 299 aaPredicted RBP27.67■■■□□ 2.02
HMBOX1-215ENST00000560599 RRP7BPQ9NSQ0 103 aa27.67■■■□□ 2.02
HMBOX1-215ENST00000560599 ADGRL2O95490 1459 aa27.66■■■□□ 2.02
HMBOX1-215ENST00000560599 CHIC2Q9UKJ5 165 aa27.66■■■□□ 2.02
HMBOX1-215ENST00000560599 KDM6BO15054 1643 aa27.65■■■□□ 2.02
HMBOX1-215ENST00000560599 SHANK2Q9UPX8 1470 aa27.63■■■□□ 2.01
HMBOX1-215ENST00000560599 ERCC6L2Q5T890 1561 aa27.63■■■□□ 2.01
HMBOX1-215ENST00000560599 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
HMBOX1-215ENST00000560599 PREX2Q70Z35 1606 aa27.6■■■□□ 2.01
HMBOX1-215ENST00000560599 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
HMBOX1-215ENST00000560599 NEUROD1Q13562 356 aa27.58■■■□□ 2
HMBOX1-215ENST00000560599 UHRF1BP1LA0JNW5 1464 aa27.57■■■□□ 2
HMBOX1-215ENST00000560599 TONSLQ96HA7 1378 aa27.56■■■□□ 2
HMBOX1-215ENST00000560599 ARHGEF5Q12774 1597 aa27.56■■■□□ 2
HMBOX1-215ENST00000560599 TRIM52Q96A61 297 aa27.5■■□□□ 1.99
HMBOX1-215ENST00000560599 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
HMBOX1-215ENST00000560599 DENND4BO75064 1496 aaPredicted RBP27.5■■□□□ 1.99
HMBOX1-215ENST00000560599 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
HMBOX1-215ENST00000560599 ZCCHC11Q5TAX3 1644 aaKnown RBP27.48■■□□□ 1.99
HMBOX1-215ENST00000560599 ZNF777Q9ULD5 760 aaPredicted RBP27.47■■□□□ 1.99
HMBOX1-215ENST00000560599 CDC42BPBQ9Y5S2 1711 aa27.46■■□□□ 1.99
HMBOX1-215ENST00000560599 SAMD9LQ8IVG5 1584 aa27.46■■□□□ 1.99
HMBOX1-215ENST00000560599 TTC37Q6PGP7 1564 aa27.45■■□□□ 1.99
HMBOX1-215ENST00000560599 C9orf84Q5VXU9 1444 aa27.45■■□□□ 1.99
HMBOX1-215ENST00000560599 PPP1R15AO75807 674 aaPredicted RBP27.45■■□□□ 1.98
HMBOX1-215ENST00000560599 KDM5BQ9UGL1 1544 aa27.44■■□□□ 1.98
HMBOX1-215ENST00000560599 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
HMBOX1-215ENST00000560599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.43■■□□□ 1.982e-6■■□□□ 13.7
HMBOX1-215ENST00000560599 MPHOSPH9Q99550 1183 aa27.42■■□□□ 1.98
HMBOX1-215ENST00000560599 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
HMBOX1-215ENST00000560599 PLEKHH2Q8IVE3 1493 aa27.39■■□□□ 1.98
HMBOX1-215ENST00000560599 ARHGAP5Q13017 1502 aa27.38■■□□□ 1.97
HMBOX1-215ENST00000560599 MAST1Q9Y2H9 1570 aa27.38■■□□□ 1.97
HMBOX1-215ENST00000560599 MBD5Q9P267 1494 aa27.37■■□□□ 1.97
HMBOX1-215ENST00000560599 PZPP20742 1482 aa27.36■■□□□ 1.97
HMBOX1-215ENST00000560599 ANKRD50Q9ULJ7 1429 aa27.35■■□□□ 1.97
HMBOX1-215ENST00000560599 KDM5DQ9BY66 1539 aa27.34■■□□□ 1.97
HMBOX1-215ENST00000560599 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
HMBOX1-215ENST00000560599 MIER1Q8N108 512 aa27.33■■□□□ 1.96
HMBOX1-215ENST00000560599 ANKRD30BQ9BXX2 1392 aa27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 SYCP2Q9BX26 1530 aa27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 RPRD2Q5VT52 1461 aaKnown RBP27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
HMBOX1-215ENST00000560599 KIAA1107Q9UPP5 1409 aa27.29■■□□□ 1.96
HMBOX1-215ENST00000560599 SLC4A1APQ9BWU0 796 aaKnown RBP27.27■■□□□ 1.96
HMBOX1-215ENST00000560599 KIF15Q9NS87 1388 aa27.27■■□□□ 1.96
HMBOX1-215ENST00000560599 ARAP3Q8WWN8 1544 aa27.27■■□□□ 1.96
HMBOX1-215ENST00000560599 PLXNC1O60486 1568 aa27.26■■□□□ 1.95
HMBOX1-215ENST00000560599 PLCH2O75038 1416 aa27.23■■□□□ 1.95
HMBOX1-215ENST00000560599 HNRNPMP52272 730 aaKnown RBP eCLIP27.22■■□□□ 1.959e-9■■■■■ 30.5
HMBOX1-215ENST00000560599 TEX14Q8IWB6 1497 aa27.21■■□□□ 1.95
HMBOX1-215ENST00000560599 ABCC1P33527 1531 aa27.21■■□□□ 1.95
HMBOX1-215ENST00000560599 WDR7Q9Y4E6 1490 aa27.19■■□□□ 1.94
HMBOX1-215ENST00000560599 UNC13BO14795 1591 aa27.16■■□□□ 1.94
HMBOX1-215ENST00000560599 FOXD1Q16676 465 aa27.14■■□□□ 1.93
HMBOX1-215ENST00000560599 EFCAB2Q5VUJ9 269 aa27.12■■□□□ 1.93
HMBOX1-215ENST00000560599 NUP155O75694 1391 aa27.11■■□□□ 1.93
HMBOX1-215ENST00000560599 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
HMBOX1-215ENST00000560599 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
HMBOX1-215ENST00000560599 ABCA9Q8IUA7 1624 aa27.11■■□□□ 1.93
HMBOX1-215ENST00000560599 L3MBTL2Q969R5 705 aa27.08■■□□□ 1.93
HMBOX1-215ENST00000560599 ARHGEF12Q9NZN5 1544 aa27.08■■□□□ 1.93
HMBOX1-215ENST00000560599 PKD2Q13563 968 aa27.07■■□□□ 1.92
HMBOX1-215ENST00000560599 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
HMBOX1-215ENST00000560599 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
HMBOX1-215ENST00000560599 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
HMBOX1-215ENST00000560599 IQGAP3Q86VI3 1631 aa27.03■■□□□ 1.92
HMBOX1-215ENST00000560599 MAGI2Q86UL8 1455 aa27.02■■□□□ 1.92
HMBOX1-215ENST00000560599 RTEL1-TNFRSF6BF6WH68 1400 aa26.99■■□□□ 1.91
HMBOX1-215ENST00000560599 ASXL2Q76L83 1435 aa26.99■■□□□ 1.91
HMBOX1-215ENST00000560599 YTHDC1Q96MU7 727 aaKnown RBP26.98■■□□□ 1.91
HMBOX1-215ENST00000560599 ZFYVE16Q7Z3T8 1539 aa26.98■■□□□ 1.91
HMBOX1-215ENST00000560599 EIF4G2P78344 907 aaKnown RBP eCLIP26.96■■□□□ 1.911e-6■■■□□ 15.8
HMBOX1-215ENST00000560599 DDX10Q13206 875 aaKnown RBP26.96■■□□□ 1.91
HMBOX1-215ENST00000560599 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.91
HMBOX1-215ENST00000560599 FANCAO15360 1455 aa26.94■■□□□ 1.9
HMBOX1-215ENST00000560599 INO80Q9ULG1 1556 aaPredicted RBP26.93■■□□□ 1.9
HMBOX1-215ENST00000560599 HSPA5P11021 654 aaKnown RBP26.92■■□□□ 1.9
HMBOX1-215ENST00000560599 CFAP74Q9C0B2 1584 aa26.92■■□□□ 1.9
HMBOX1-215ENST00000560599 HIRIP3Q9BW71 556 aaPredicted RBP26.91■■□□□ 1.9
HMBOX1-215ENST00000560599 UHRF1BP1Q6BDS2 1440 aa26.91■■□□□ 1.9
HMBOX1-215ENST00000560599 SCAF1Q9H7N4 1312 aaKnown RBP26.91■■□□□ 1.9
HMBOX1-215ENST00000560599 SPAG9O60271 1321 aaKnown RBP26.88■■□□□ 1.89
HMBOX1-215ENST00000560599 ATP7AQ04656 1500 aa26.87■■□□□ 1.89
HMBOX1-215ENST00000560599 NPM1P06748 294 aaKnown RBP eCLIP26.87■■□□□ 1.89
HMBOX1-215ENST00000560599 NBPF8Q3BBV2 869 aa26.87■■□□□ 1.89
HMBOX1-215ENST00000560599 POLR1AO95602 1720 aaPredicted RBP26.86■■□□□ 1.89
HMBOX1-215ENST00000560599 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
HMBOX1-215ENST00000560599 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
HMBOX1-215ENST00000560599 DEPDC5O75140 1603 aa26.82■■□□□ 1.88
HMBOX1-215ENST00000560599 EIF2AK4Q9P2K8 1649 aaKnown RBP26.82■■□□□ 1.88
HMBOX1-215ENST00000560599 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
HMBOX1-215ENST00000560599 ANP32CO43423 234 aa26.82■■□□□ 1.88
HMBOX1-215ENST00000560599 ATP10AO60312 1499 aa26.81■■□□□ 1.88
HMBOX1-215ENST00000560599 SPATA31E1Q6ZUB1 1445 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms