RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 BCL11BQ9C0K0 894 aaPredicted RBP9.44□□□□□ -0.9
AC066612.1-201ENST00000560339 NLRP6P59044 892 aa9.43□□□□□ -0.9
AC066612.1-201ENST00000560339 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
AC066612.1-201ENST00000560339 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
AC066612.1-201ENST00000560339 STK25O00506 426 aa9.39□□□□□ -0.91
AC066612.1-201ENST00000560339 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
AC066612.1-201ENST00000560339 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
AC066612.1-201ENST00000560339 FBXO22Q8NEZ5 403 aa9.35□□□□□ -0.91
AC066612.1-201ENST00000560339 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
AC066612.1-201ENST00000560339 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
AC066612.1-201ENST00000560339 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
AC066612.1-201ENST00000560339 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
AC066612.1-201ENST00000560339 RGL2O15211 777 aa9.29□□□□□ -0.92
AC066612.1-201ENST00000560339 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
AC066612.1-201ENST00000560339 PKD2Q13563 968 aa9.27□□□□□ -0.93
AC066612.1-201ENST00000560339 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.93
AC066612.1-201ENST00000560339 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
AC066612.1-201ENST00000560339 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
AC066612.1-201ENST00000560339 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
AC066612.1-201ENST00000560339 TMC2Q8TDI7 906 aa9.23□□□□□ -0.93
AC066612.1-201ENST00000560339 KIF3CO14782 793 aa9.22□□□□□ -0.93
AC066612.1-201ENST00000560339 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
AC066612.1-201ENST00000560339 NUDT7P0C024 238 aa9.21□□□□□ -0.94
AC066612.1-201ENST00000560339 PTGER2P43116 358 aa9.18□□□□□ -0.94
AC066612.1-201ENST00000560339 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
AC066612.1-201ENST00000560339 PPP1R37O75864 691 aa9.16□□□□□ -0.94
AC066612.1-201ENST00000560339 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
AC066612.1-201ENST00000560339 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
AC066612.1-201ENST00000560339 SLC34A2O95436 690 aa9.15□□□□□ -0.94
AC066612.1-201ENST00000560339 PBX2P40425 430 aa9.13□□□□□ -0.95
AC066612.1-201ENST00000560339 AXIN2Q9Y2T1 843 aa9.12□□□□□ -0.95
AC066612.1-201ENST00000560339 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
AC066612.1-201ENST00000560339 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
AC066612.1-201ENST00000560339 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
AC066612.1-201ENST00000560339 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
AC066612.1-201ENST00000560339 POTEEQ6S8J3 1075 aa9.06□□□□□ -0.96
AC066612.1-201ENST00000560339 FOXK1P85037 733 aa9.05□□□□□ -0.96
AC066612.1-201ENST00000560339 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
AC066612.1-201ENST00000560339 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
AC066612.1-201ENST00000560339 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
AC066612.1-201ENST00000560339 TBC1D12O60347 775 aa9.03□□□□□ -0.96
AC066612.1-201ENST00000560339 DSG2Q14126 1118 aa9.02□□□□□ -0.97
AC066612.1-201ENST00000560339 ADGRD1Q6QNK2 874 aa9.01□□□□□ -0.97
AC066612.1-201ENST00000560339 PPP4R3BQ5MIZ7 849 aa9□□□□□ -0.97
AC066612.1-201ENST00000560339 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
AC066612.1-201ENST00000560339 RYDENQ9NUL5 291 aaKnown RBP8.99□□□□□ -0.97
AC066612.1-201ENST00000560339 PSEN2P49810 448 aa8.98□□□□□ -0.97
AC066612.1-201ENST00000560339 KCNH8Q96L42 1107 aa8.97□□□□□ -0.97
AC066612.1-201ENST00000560339 HCSTQ9UBK5 93 aa8.97□□□□□ -0.97
AC066612.1-201ENST00000560339 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
AC066612.1-201ENST00000560339 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
AC066612.1-201ENST00000560339 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
AC066612.1-201ENST00000560339 TK2O00142 265 aa8.95□□□□□ -0.98
AC066612.1-201ENST00000560339 NKX1-1Q15270 411 aaPredicted RBP8.95□□□□□ -0.98
AC066612.1-201ENST00000560339 KCNK17Q96T54 332 aa8.93□□□□□ -0.98
AC066612.1-201ENST00000560339 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
AC066612.1-201ENST00000560339 PPP1R15BQ5SWA1 713 aa8.91□□□□□ -0.98
AC066612.1-201ENST00000560339 OXER1Q8TDS5 423 aa8.91□□□□□ -0.98
AC066612.1-201ENST00000560339 DNAJC5Q9H3Z4 198 aa8.91□□□□□ -0.98
AC066612.1-201ENST00000560339 HRO43593 1189 aa8.9□□□□□ -0.98
AC066612.1-201ENST00000560339 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
AC066612.1-201ENST00000560339 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.98
AC066612.1-201ENST00000560339 CRISPLD2Q9H0B8 497 aa8.9□□□□□ -0.98
AC066612.1-201ENST00000560339 PDE4AP27815 886 aa8.88□□□□□ -0.99
AC066612.1-201ENST00000560339 DCAF8L2P0C7V8 631 aa8.85□□□□□ -0.99
AC066612.1-201ENST00000560339 NCKAP5LQ9HCH0 1330 aa8.84□□□□□ -0.99
AC066612.1-201ENST00000560339 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
AC066612.1-201ENST00000560339 PTPREP23469 700 aa8.83□□□□□ -1
AC066612.1-201ENST00000560339 LARP6Q9BRS8 491 aaKnown RBP8.83□□□□□ -1
AC066612.1-201ENST00000560339 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
AC066612.1-201ENST00000560339 FOSBP53539 338 aa8.82□□□□□ -1
AC066612.1-201ENST00000560339 PTPN5P54829 565 aa8.82□□□□□ -1
AC066612.1-201ENST00000560339 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
AC066612.1-201ENST00000560339 EVI5O60447 810 aa8.81□□□□□ -1
AC066612.1-201ENST00000560339 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
AC066612.1-201ENST00000560339 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
AC066612.1-201ENST00000560339 MAP3K9P80192 1104 aa8.8□□□□□ -1
AC066612.1-201ENST00000560339 JPH4Q96JJ6 628 aa8.79□□□□□ -1
AC066612.1-201ENST00000560339 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
AC066612.1-201ENST00000560339 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
AC066612.1-201ENST00000560339 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
AC066612.1-201ENST00000560339 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
AC066612.1-201ENST00000560339 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
AC066612.1-201ENST00000560339 ADAM33Q9BZ11 813 aa8.76□□□□□ -1.01
AC066612.1-201ENST00000560339 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
AC066612.1-201ENST00000560339 WNT2BQ93097 391 aa8.74□□□□□ -1.01
AC066612.1-201ENST00000560339 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
AC066612.1-201ENST00000560339 MFSD10Q14728 455 aa8.73□□□□□ -1.01
AC066612.1-201ENST00000560339 THSD4Q6ZMP0 1018 aa8.73□□□□□ -1.01
AC066612.1-201ENST00000560339 EMILIN3Q9NT22 766 aa8.71□□□□□ -1.02
AC066612.1-201ENST00000560339 PPP1R3GB7ZBB8 358 aa8.69□□□□□ -1.02
AC066612.1-201ENST00000560339 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
AC066612.1-201ENST00000560339 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
AC066612.1-201ENST00000560339 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
AC066612.1-201ENST00000560339 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
AC066612.1-201ENST00000560339 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
AC066612.1-201ENST00000560339 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
AC066612.1-201ENST00000560339 PHF14O94880 888 aa8.65□□□□□ -1.02
AC066612.1-201ENST00000560339 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
AC066612.1-201ENST00000560339 COL9A1P20849 921 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms