RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
CRNDE-208ENST00000560029 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
CRNDE-208ENST00000560029 NLRP6P59044 892 aa14.2□□□□□ -0.14
CRNDE-208ENST00000560029 GPR153Q6NV75 609 aa14.2□□□□□ -0.14
CRNDE-208ENST00000560029 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
CRNDE-208ENST00000560029 ARSIQ5FYB1 569 aa14.18□□□□□ -0.14
CRNDE-208ENST00000560029 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
CRNDE-208ENST00000560029 STK25O00506 426 aa14.16□□□□□ -0.14
CRNDE-208ENST00000560029 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
CRNDE-208ENST00000560029 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
CRNDE-208ENST00000560029 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
CRNDE-208ENST00000560029 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
CRNDE-208ENST00000560029 ZNF687Q8N1G0 1237 aa14.09□□□□□ -0.15
CRNDE-208ENST00000560029 RGL2O15211 777 aa14.08□□□□□ -0.16
CRNDE-208ENST00000560029 PKD2Q13563 968 aa14.06□□□□□ -0.16
CRNDE-208ENST00000560029 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
CRNDE-208ENST00000560029 RNF166Q96A37 237 aaPredicted RBP14.04□□□□□ -0.16
CRNDE-208ENST00000560029 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
CRNDE-208ENST00000560029 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
CRNDE-208ENST00000560029 KIF3CO14782 793 aa14□□□□□ -0.17
CRNDE-208ENST00000560029 ANKRD13DQ6ZTN6 518 aa14□□□□□ -0.17
CRNDE-208ENST00000560029 NUDT7P0C024 238 aa13.98□□□□□ -0.17
CRNDE-208ENST00000560029 PPP1R37O75864 691 aa13.96□□□□□ -0.17
CRNDE-208ENST00000560029 TMC2Q8TDI7 906 aa13.91□□□□□ -0.18
CRNDE-208ENST00000560029 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
CRNDE-208ENST00000560029 PCDHGA4Q9Y5G9 962 aa13.9□□□□□ -0.18
CRNDE-208ENST00000560029 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
CRNDE-208ENST00000560029 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
CRNDE-208ENST00000560029 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
CRNDE-208ENST00000560029 SLC34A2O95436 690 aa13.83□□□□□ -0.2
CRNDE-208ENST00000560029 PTGER2P43116 358 aa13.79□□□□□ -0.2
CRNDE-208ENST00000560029 PBX2P40425 430 aa13.74□□□□□ -0.21
CRNDE-208ENST00000560029 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
CRNDE-208ENST00000560029 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
CRNDE-208ENST00000560029 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
CRNDE-208ENST00000560029 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
CRNDE-208ENST00000560029 DSG2Q14126 1118 aa13.68□□□□□ -0.22
CRNDE-208ENST00000560029 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
CRNDE-208ENST00000560029 ARHGAP33O14559 1287 aa13.67□□□□□ -0.22
CRNDE-208ENST00000560029 FOXK1P85037 733 aa13.67□□□□□ -0.22
CRNDE-208ENST00000560029 PSEN2P49810 448 aa13.66□□□□□ -0.22
CRNDE-208ENST00000560029 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
CRNDE-208ENST00000560029 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
CRNDE-208ENST00000560029 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
CRNDE-208ENST00000560029 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
CRNDE-208ENST00000560029 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
CRNDE-208ENST00000560029 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
CRNDE-208ENST00000560029 TBC1D12O60347 775 aa13.56□□□□□ -0.24
CRNDE-208ENST00000560029 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
CRNDE-208ENST00000560029 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
CRNDE-208ENST00000560029 PLA2G2EQ9NZK7 142 aa13.54□□□□□ -0.24
CRNDE-208ENST00000560029 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
CRNDE-208ENST00000560029 HRO43593 1189 aa13.52□□□□□ -0.25
CRNDE-208ENST00000560029 TK2O00142 265 aa13.5□□□□□ -0.25
CRNDE-208ENST00000560029 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
CRNDE-208ENST00000560029 KCTD12Q96CX2 325 aaKnown RBP13.49□□□□□ -0.25
CRNDE-208ENST00000560029 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
CRNDE-208ENST00000560029 STAC3Q96MF2 364 aa13.46□□□□□ -0.25
CRNDE-208ENST00000560029 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
CRNDE-208ENST00000560029 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
CRNDE-208ENST00000560029 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
CRNDE-208ENST00000560029 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CRNDE-208ENST00000560029 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
CRNDE-208ENST00000560029 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
CRNDE-208ENST00000560029 KCNH8Q96L42 1107 aa13.4□□□□□ -0.26
CRNDE-208ENST00000560029 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
CRNDE-208ENST00000560029 PTPN5P54829 565 aa13.38□□□□□ -0.27
CRNDE-208ENST00000560029 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
CRNDE-208ENST00000560029 PDE4AP27815 886 aa13.36□□□□□ -0.27
CRNDE-208ENST00000560029 FOSBP53539 338 aa13.35□□□□□ -0.27
CRNDE-208ENST00000560029 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
CRNDE-208ENST00000560029 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
CRNDE-208ENST00000560029 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
CRNDE-208ENST00000560029 EVI5O60447 810 aa13.32□□□□□ -0.28
CRNDE-208ENST00000560029 PTPREP23469 700 aa13.3□□□□□ -0.28
CRNDE-208ENST00000560029 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
CRNDE-208ENST00000560029 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
CRNDE-208ENST00000560029 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
CRNDE-208ENST00000560029 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
CRNDE-208ENST00000560029 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
CRNDE-208ENST00000560029 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
CRNDE-208ENST00000560029 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
CRNDE-208ENST00000560029 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
CRNDE-208ENST00000560029 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
CRNDE-208ENST00000560029 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
CRNDE-208ENST00000560029 GOLGA8CPA6NN73 597 aa13.24□□□□□ -0.29
CRNDE-208ENST00000560029 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
CRNDE-208ENST00000560029 THSD4Q6ZMP0 1018 aa13.22□□□□□ -0.29
CRNDE-208ENST00000560029 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
CRNDE-208ENST00000560029 WNT2BQ93097 391 aa13.22□□□□□ -0.29
CRNDE-208ENST00000560029 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
CRNDE-208ENST00000560029 MFSD10Q14728 455 aa13.18□□□□□ -0.3
CRNDE-208ENST00000560029 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
CRNDE-208ENST00000560029 PROX2Q3B8N5 592 aa13.16□□□□□ -0.3
CRNDE-208ENST00000560029 COL9A1P20849 921 aa13.15□□□□□ -0.3
CRNDE-208ENST00000560029 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
CRNDE-208ENST00000560029 PPP1R3GB7ZBB8 358 aa13.09□□□□□ -0.31
CRNDE-208ENST00000560029 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
CRNDE-208ENST00000560029 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
CRNDE-208ENST00000560029 BCAMP50895 628 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms