RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.55
HERC1-204ENST00000559715 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
HERC1-204ENST00000559715 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
HERC1-204ENST00000559715 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
HERC1-204ENST00000559715 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
HERC1-204ENST00000559715 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
HERC1-204ENST00000559715 FER1L4A9Z1Z3 1794 aa18.46■□□□□ 0.55
HERC1-204ENST00000559715 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
HERC1-204ENST00000559715 TROQ12816 1431 aaPredicted RBP18.45■□□□□ 0.54
HERC1-204ENST00000559715 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
HERC1-204ENST00000559715 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
HERC1-204ENST00000559715 ATP10AO60312 1499 aa18.44■□□□□ 0.54
HERC1-204ENST00000559715 KDM5CP41229 1560 aa18.43■□□□□ 0.54
HERC1-204ENST00000559715 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
HERC1-204ENST00000559715 HSPA2P54652 639 aa18.42■□□□□ 0.54
HERC1-204ENST00000559715 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
HERC1-204ENST00000559715 C9orf84Q5VXU9 1444 aa18.4■□□□□ 0.54
HERC1-204ENST00000559715 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
HERC1-204ENST00000559715 MLECQ14165 292 aa18.38■□□□□ 0.53
HERC1-204ENST00000559715 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
HERC1-204ENST00000559715 ZNF518AQ6AHZ1 1483 aa18.38■□□□□ 0.53
HERC1-204ENST00000559715 ARHGAP5Q13017 1502 aa18.37■□□□□ 0.53
HERC1-204ENST00000559715 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
HERC1-204ENST00000559715 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
HERC1-204ENST00000559715 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
HERC1-204ENST00000559715 REREQ9P2R6 1566 aa18.35■□□□□ 0.53
HERC1-204ENST00000559715 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
HERC1-204ENST00000559715 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
HERC1-204ENST00000559715 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.53
HERC1-204ENST00000559715 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.52
HERC1-204ENST00000559715 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
HERC1-204ENST00000559715 PREX1Q8TCU6 1659 aa18.33■□□□□ 0.52
HERC1-204ENST00000559715 ABCC1P33527 1531 aa18.33■□□□□ 0.52
HERC1-204ENST00000559715 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
HERC1-204ENST00000559715 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
HERC1-204ENST00000559715 SETD1BQ9UPS6 1966 aaKnown RBP18.32■□□□□ 0.52
HERC1-204ENST00000559715 CLIP1P30622 1438 aa18.32■□□□□ 0.52
HERC1-204ENST00000559715 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
HERC1-204ENST00000559715 KIDINS220Q9ULH0 1771 aa18.31■□□□□ 0.52
HERC1-204ENST00000559715 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
HERC1-204ENST00000559715 AGLP35573 1532 aa18.28■□□□□ 0.52
HERC1-204ENST00000559715 C3P01024 1663 aa18.28■□□□□ 0.52
HERC1-204ENST00000559715 FYCO1Q9BQS8 1478 aa18.25■□□□□ 0.51
HERC1-204ENST00000559715 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
HERC1-204ENST00000559715 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
HERC1-204ENST00000559715 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
HERC1-204ENST00000559715 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
HERC1-204ENST00000559715 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
HERC1-204ENST00000559715 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
HERC1-204ENST00000559715 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
HERC1-204ENST00000559715 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
HERC1-204ENST00000559715 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
HERC1-204ENST00000559715 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
HERC1-204ENST00000559715 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.49
HERC1-204ENST00000559715 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
HERC1-204ENST00000559715 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
HERC1-204ENST00000559715 PTPRTO14522 1441 aa18.11■□□□□ 0.49
HERC1-204ENST00000559715 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
HERC1-204ENST00000559715 CNTLNQ9NXG0 1405 aa18.1■□□□□ 0.49
HERC1-204ENST00000559715 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
HERC1-204ENST00000559715 LTBP4Q8N2S1 1624 aa18.09■□□□□ 0.49
HERC1-204ENST00000559715 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
HERC1-204ENST00000559715 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
HERC1-204ENST00000559715 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
HERC1-204ENST00000559715 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
HERC1-204ENST00000559715 NPATQ14207 1427 aa18.07■□□□□ 0.48
HERC1-204ENST00000559715 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
HERC1-204ENST00000559715 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
HERC1-204ENST00000559715 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
HERC1-204ENST00000559715 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
HERC1-204ENST00000559715 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
HERC1-204ENST00000559715 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
HERC1-204ENST00000559715 A2MP01023 1474 aa18.05■□□□□ 0.48
HERC1-204ENST00000559715 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
HERC1-204ENST00000559715 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
HERC1-204ENST00000559715 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
HERC1-204ENST00000559715 PTPRKQ15262 1439 aa18.02■□□□□ 0.48
HERC1-204ENST00000559715 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
HERC1-204ENST00000559715 ZNF142P52746 1687 aaPredicted RBP18.02■□□□□ 0.47
HERC1-204ENST00000559715 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
HERC1-204ENST00000559715 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
HERC1-204ENST00000559715 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
HERC1-204ENST00000559715 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
HERC1-204ENST00000559715 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
HERC1-204ENST00000559715 TCOF1Q13428 1488 aaKnown RBP17.96■□□□□ 0.47
HERC1-204ENST00000559715 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.46
HERC1-204ENST00000559715 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
HERC1-204ENST00000559715 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
HERC1-204ENST00000559715 GGT6Q6P531 493 aa17.94■□□□□ 0.46
HERC1-204ENST00000559715 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
HERC1-204ENST00000559715 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
HERC1-204ENST00000559715 DHX29Q7Z478 1369 aaKnown RBP17.93■□□□□ 0.46
HERC1-204ENST00000559715 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
HERC1-204ENST00000559715 DNMT1P26358 1616 aaKnown RBP17.91■□□□□ 0.46
HERC1-204ENST00000559715 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
HERC1-204ENST00000559715 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
HERC1-204ENST00000559715 CAMSAP2Q08AD1 1489 aa17.89■□□□□ 0.45
HERC1-204ENST00000559715 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
HERC1-204ENST00000559715 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
HERC1-204ENST00000559715 PKD2Q13563 968 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms