RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 MLECQ14165 292 aa13.62□□□□□ -0.23
CDK12-205ENST00000559663 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
CDK12-205ENST00000559663 ATP10AO60312 1499 aa13.6□□□□□ -0.23
CDK12-205ENST00000559663 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
CDK12-205ENST00000559663 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
CDK12-205ENST00000559663 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
CDK12-205ENST00000559663 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
CDK12-205ENST00000559663 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
CDK12-205ENST00000559663 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
CDK12-205ENST00000559663 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
CDK12-205ENST00000559663 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
CDK12-205ENST00000559663 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
CDK12-205ENST00000559663 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
CDK12-205ENST00000559663 KDM5CP41229 1560 aa13.53□□□□□ -0.24
CDK12-205ENST00000559663 UBTFP17480 764 aaKnown RBP13.52□□□□□ -0.25
CDK12-205ENST00000559663 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.25
CDK12-205ENST00000559663 AFAP1Q8N556 730 aa13.52□□□□□ -0.25
CDK12-205ENST00000559663 KIF14Q15058 1648 aa13.52□□□□□ -0.25
CDK12-205ENST00000559663 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
CDK12-205ENST00000559663 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
CDK12-205ENST00000559663 CLIP1P30622 1438 aa13.5□□□□□ -0.25
CDK12-205ENST00000559663 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
CDK12-205ENST00000559663 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
CDK12-205ENST00000559663 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
CDK12-205ENST00000559663 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
CDK12-205ENST00000559663 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
CDK12-205ENST00000559663 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
CDK12-205ENST00000559663 DIP2CQ9Y2E4 1556 aa13.48□□□□□ -0.25
CDK12-205ENST00000559663 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
CDK12-205ENST00000559663 AGLP35573 1532 aa13.45□□□□□ -0.26
CDK12-205ENST00000559663 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
CDK12-205ENST00000559663 ABCC1P33527 1531 aa13.44□□□□□ -0.26
CDK12-205ENST00000559663 ABCA6Q8N139 1617 aa13.44□□□□□ -0.26
CDK12-205ENST00000559663 PTPRTO14522 1441 aa13.44□□□□□ -0.26
CDK12-205ENST00000559663 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
CDK12-205ENST00000559663 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
CDK12-205ENST00000559663 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
CDK12-205ENST00000559663 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
CDK12-205ENST00000559663 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
CDK12-205ENST00000559663 PREX2Q70Z35 1606 aa13.41□□□□□ -0.26
CDK12-205ENST00000559663 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
CDK12-205ENST00000559663 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
CDK12-205ENST00000559663 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
CDK12-205ENST00000559663 C3P01024 1663 aa13.38□□□□□ -0.27
CDK12-205ENST00000559663 LRRIQ1Q96JM4 1722 aa13.38□□□□□ -0.27
CDK12-205ENST00000559663 ILDR2Q71H61 639 aa13.37□□□□□ -0.27
CDK12-205ENST00000559663 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
CDK12-205ENST00000559663 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
CDK12-205ENST00000559663 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
CDK12-205ENST00000559663 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
CDK12-205ENST00000559663 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
CDK12-205ENST00000559663 NPATQ14207 1427 aa13.36□□□□□ -0.27
CDK12-205ENST00000559663 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
CDK12-205ENST00000559663 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
CDK12-205ENST00000559663 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
CDK12-205ENST00000559663 SOCS7O14512 581 aa13.34□□□□□ -0.27
CDK12-205ENST00000559663 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
CDK12-205ENST00000559663 GPATCH8Q9UKJ3 1502 aaKnown RBP13.33□□□□□ -0.28
CDK12-205ENST00000559663 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
CDK12-205ENST00000559663 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
CDK12-205ENST00000559663 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
CDK12-205ENST00000559663 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
CDK12-205ENST00000559663 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
CDK12-205ENST00000559663 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
CDK12-205ENST00000559663 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
CDK12-205ENST00000559663 HNRNPMP52272 730 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDK12-205ENST00000559663 MROH2AA6NES4 1674 aa13.3□□□□□ -0.28
CDK12-205ENST00000559663 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
CDK12-205ENST00000559663 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
CDK12-205ENST00000559663 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
CDK12-205ENST00000559663 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
CDK12-205ENST00000559663 A2MP01023 1474 aa13.28□□□□□ -0.28
CDK12-205ENST00000559663 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
CDK12-205ENST00000559663 PKD2Q13563 968 aa13.27□□□□□ -0.29
CDK12-205ENST00000559663 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
CDK12-205ENST00000559663 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.29
CDK12-205ENST00000559663 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
CDK12-205ENST00000559663 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
CDK12-205ENST00000559663 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
CDK12-205ENST00000559663 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CDK12-205ENST00000559663 GGT6Q6P531 493 aa13.24□□□□□ -0.29
CDK12-205ENST00000559663 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
CDK12-205ENST00000559663 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
CDK12-205ENST00000559663 MYO3AQ8NEV4 1616 aa13.24□□□□□ -0.29
CDK12-205ENST00000559663 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
CDK12-205ENST00000559663 SUPT6HQ7KZ85 1726 aaKnown RBP13.22□□□□□ -0.29
CDK12-205ENST00000559663 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
CDK12-205ENST00000559663 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
CDK12-205ENST00000559663 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
CDK12-205ENST00000559663 MBD5Q9P267 1494 aa13.21□□□□□ -0.3
CDK12-205ENST00000559663 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
CDK12-205ENST00000559663 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
CDK12-205ENST00000559663 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
CDK12-205ENST00000559663 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
CDK12-205ENST00000559663 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
CDK12-205ENST00000559663 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
CDK12-205ENST00000559663 ADGBQ8N7X0 1667 aa13.16□□□□□ -0.3
CDK12-205ENST00000559663 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
CDK12-205ENST00000559663 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
CDK12-205ENST00000559663 TNRQ92752 1358 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms