RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 CDK13Q14004 1512 aaKnown RBP27.46■■□□□ 1.99
PSEN1-224ENST00000559361 PLPPR3Q6T4P5 718 aa27.45■■□□□ 1.98
PSEN1-224ENST00000559361 CERKQ8TCT0 537 aa27.45■■□□□ 1.98
PSEN1-224ENST00000559361 MLECQ14165 292 aa27.43■■□□□ 1.98
PSEN1-224ENST00000559361 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
PSEN1-224ENST00000559361 ATP10AO60312 1499 aa27.42■■□□□ 1.98
PSEN1-224ENST00000559361 C9orf84Q5VXU9 1444 aa27.36■■□□□ 1.97
PSEN1-224ENST00000559361 EFCAB2Q5VUJ9 269 aa27.36■■□□□ 1.97
PSEN1-224ENST00000559361 SETD1BQ9UPS6 1966 aaKnown RBP27.35■■□□□ 1.97
PSEN1-224ENST00000559361 PREX1Q8TCU6 1659 aa27.34■■□□□ 1.97
PSEN1-224ENST00000559361 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.97
PSEN1-224ENST00000559361 CEBPAP49715 358 aaPredicted RBP27.3■■□□□ 1.96
PSEN1-224ENST00000559361 FMN1Q68DA7 1419 aa27.29■■□□□ 1.96
PSEN1-224ENST00000559361 STRCQ7RTU9 1775 aa27.28■■□□□ 1.96
PSEN1-224ENST00000559361 ZNF518AQ6AHZ1 1483 aa27.27■■□□□ 1.96
PSEN1-224ENST00000559361 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
PSEN1-224ENST00000559361 KDM5CP41229 1560 aa27.26■■□□□ 1.96
PSEN1-224ENST00000559361 KIF14Q15058 1648 aa27.25■■□□□ 1.95
PSEN1-224ENST00000559361 AFAP1Q8N556 730 aa27.24■■□□□ 1.95
PSEN1-224ENST00000559361 DMRT2Q9Y5R5 561 aa27.24■■□□□ 1.95
PSEN1-224ENST00000559361 ARHGAP35Q9NRY4 1499 aa27.23■■□□□ 1.95
PSEN1-224ENST00000559361 TROQ12816 1431 aaPredicted RBP27.22■■□□□ 1.95
PSEN1-224ENST00000559361 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
PSEN1-224ENST00000559361 REREQ9P2R6 1566 aa27.2■■□□□ 1.94
PSEN1-224ENST00000559361 DIP2CQ9Y2E4 1556 aa27.18■■□□□ 1.94
PSEN1-224ENST00000559361 UHRF1BP1Q6BDS2 1440 aa27.18■■□□□ 1.94
PSEN1-224ENST00000559361 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
PSEN1-224ENST00000559361 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
PSEN1-224ENST00000559361 MLH3Q9UHC1 1453 aa27.16■■□□□ 1.94
PSEN1-224ENST00000559361 CDC42BPBQ9Y5S2 1711 aa27.15■■□□□ 1.94
PSEN1-224ENST00000559361 LRRIQ1Q96JM4 1722 aa27.13■■□□□ 1.93
PSEN1-224ENST00000559361 PTPRTO14522 1441 aa27.13■■□□□ 1.93
PSEN1-224ENST00000559361 CLIP1P30622 1438 aa27.13■■□□□ 1.93
PSEN1-224ENST00000559361 AGLP35573 1532 aa27.12■■□□□ 1.93
PSEN1-224ENST00000559361 C3P01024 1663 aa27.12■■□□□ 1.93
PSEN1-224ENST00000559361 ABCA6Q8N139 1617 aa27.11■■□□□ 1.93
PSEN1-224ENST00000559361 ILDR2Q71H61 639 aa27.09■■□□□ 1.93
PSEN1-224ENST00000559361 TRAPPC8Q9Y2L5 1435 aa27.07■■□□□ 1.92
PSEN1-224ENST00000559361 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
PSEN1-224ENST00000559361 DISP3Q9P2K9 1392 aa27.07■■□□□ 1.92
PSEN1-224ENST00000559361 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
PSEN1-224ENST00000559361 ABCC1P33527 1531 aa27.05■■□□□ 1.92
PSEN1-224ENST00000559361 PREX2Q70Z35 1606 aa27.05■■□□□ 1.92
PSEN1-224ENST00000559361 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
PSEN1-224ENST00000559361 LTBP4Q8N2S1 1624 aa27.02■■□□□ 1.92
PSEN1-224ENST00000559361 ITSN2Q9NZM3 1697 aa27.01■■□□□ 1.92
PSEN1-224ENST00000559361 SOCS7O14512 581 aa27.01■■□□□ 1.91
PSEN1-224ENST00000559361 ESF1Q9H501 851 aaKnown RBP26.99■■□□□ 1.91
PSEN1-224ENST00000559361 CNTLNQ9NXG0 1405 aa26.99■■□□□ 1.91
PSEN1-224ENST00000559361 NCOA1Q15788 1441 aa26.98■■□□□ 1.91
PSEN1-224ENST00000559361 IQSEC2Q5JU85 1478 aa26.97■■□□□ 1.91
PSEN1-224ENST00000559361 CASKIN1Q8WXD9 1431 aa26.96■■□□□ 1.91
PSEN1-224ENST00000559361 CDC42BPAQ5VT25 1732 aa26.95■■□□□ 1.9
PSEN1-224ENST00000559361 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
PSEN1-224ENST00000559361 NPATQ14207 1427 aa26.91■■□□□ 1.9
PSEN1-224ENST00000559361 MROH2AA6NES4 1674 aa26.91■■□□□ 1.9
PSEN1-224ENST00000559361 SAMD9LQ8IVG5 1584 aa26.9■■□□□ 1.9
PSEN1-224ENST00000559361 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
PSEN1-224ENST00000559361 ZMYM3Q14202 1370 aa26.88■■□□□ 1.89
PSEN1-224ENST00000559361 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
PSEN1-224ENST00000559361 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
PSEN1-224ENST00000559361 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.89
PSEN1-224ENST00000559361 SPAG9O60271 1321 aaKnown RBP26.81■■□□□ 1.88
PSEN1-224ENST00000559361 SYCP2Q9BX26 1530 aa26.8■■□□□ 1.88
PSEN1-224ENST00000559361 SUPT6HQ7KZ85 1726 aaKnown RBP26.79■■□□□ 1.88
PSEN1-224ENST00000559361 HNRNPMP52272 730 aaKnown RBP eCLIP26.79■■□□□ 1.88
PSEN1-224ENST00000559361 ZNF777Q9ULD5 760 aaPredicted RBP26.79■■□□□ 1.88
PSEN1-224ENST00000559361 FYCO1Q9BQS8 1478 aa26.79■■□□□ 1.88
PSEN1-224ENST00000559361 NCKAP5LQ9HCH0 1330 aa26.78■■□□□ 1.88
PSEN1-224ENST00000559361 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
PSEN1-224ENST00000559361 PLXNC1O60486 1568 aa26.78■■□□□ 1.88
PSEN1-224ENST00000559361 ZNF142P52746 1687 aaPredicted RBP26.76■■□□□ 1.87
PSEN1-224ENST00000559361 PLA2R1Q13018 1463 aa26.76■■□□□ 1.87
PSEN1-224ENST00000559361 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
PSEN1-224ENST00000559361 ATP7AQ04656 1500 aa26.75■■□□□ 1.87
PSEN1-224ENST00000559361 ZNF335Q9H4Z2 1342 aaPredicted RBP26.75■■□□□ 1.87
PSEN1-224ENST00000559361 PKD2Q13563 968 aa26.75■■□□□ 1.87
PSEN1-224ENST00000559361 CLTCQ00610 1675 aaKnown RBP26.75■■□□□ 1.87
PSEN1-224ENST00000559361 PTPRKQ15262 1439 aa26.74■■□□□ 1.87
PSEN1-224ENST00000559361 INO80Q9ULG1 1556 aaPredicted RBP26.74■■□□□ 1.87
PSEN1-224ENST00000559361 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
PSEN1-224ENST00000559361 A2MP01023 1474 aa26.73■■□□□ 1.87
PSEN1-224ENST00000559361 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
PSEN1-224ENST00000559361 PLEKHH2Q8IVE3 1493 aa26.72■■□□□ 1.87
PSEN1-224ENST00000559361 PPP6R1Q9UPN7 881 aa26.7■■□□□ 1.86
PSEN1-224ENST00000559361 CEP170BQ9Y4F5 1589 aaPredicted RBP26.7■■□□□ 1.86
PSEN1-224ENST00000559361 CFDP1Q9UEE9 299 aaPredicted RBP26.69■■□□□ 1.86
PSEN1-224ENST00000559361 UBAP1LF5GYI3 381 aa26.67■■□□□ 1.86
PSEN1-224ENST00000559361 GGT6Q6P531 493 aa26.66■■□□□ 1.86
PSEN1-224ENST00000559361 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
PSEN1-224ENST00000559361 ADGBQ8N7X0 1667 aa26.62■■□□□ 1.85
PSEN1-224ENST00000559361 A2ML1A8K2U0 1454 aa26.59■■□□□ 1.85
PSEN1-224ENST00000559361 DNMT1P26358 1616 aaKnown RBP26.58■■□□□ 1.85
PSEN1-224ENST00000559361 MBD5Q9P267 1494 aa26.58■■□□□ 1.85
PSEN1-224ENST00000559361 ZNF644Q9H582 1327 aaPredicted RBP26.56■■□□□ 1.84
PSEN1-224ENST00000559361 RTEL1-TNFRSF6BF6WH68 1400 aa26.56■■□□□ 1.84
PSEN1-224ENST00000559361 MTUS2Q5JR59 1369 aa26.54■■□□□ 1.84
PSEN1-224ENST00000559361 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
PSEN1-224ENST00000559361 TIAM1Q13009 1591 aa26.52■■□□□ 1.84
PSEN1-224ENST00000559361 NEURL4Q96JN8 1562 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms