RNA–Protein interactions for RNA: ENST00000559006.1

RAB8B-204, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB8B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-204ENST00000559006 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
RAB8B-204ENST00000559006 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
RAB8B-204ENST00000559006 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
RAB8B-204ENST00000559006 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
RAB8B-204ENST00000559006 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
RAB8B-204ENST00000559006 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
RAB8B-204ENST00000559006 KIF3CO14782 793 aa12.75□□□□□ -0.37
RAB8B-204ENST00000559006 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
RAB8B-204ENST00000559006 PPP1R37O75864 691 aa12.71□□□□□ -0.37
RAB8B-204ENST00000559006 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
RAB8B-204ENST00000559006 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
RAB8B-204ENST00000559006 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
RAB8B-204ENST00000559006 ERBB3P21860 1342 aa12.7□□□□□ -0.38
RAB8B-204ENST00000559006 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
RAB8B-204ENST00000559006 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
RAB8B-204ENST00000559006 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
RAB8B-204ENST00000559006 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
RAB8B-204ENST00000559006 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
RAB8B-204ENST00000559006 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
RAB8B-204ENST00000559006 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
RAB8B-204ENST00000559006 SLC34A2O95436 690 aa12.61□□□□□ -0.39
RAB8B-204ENST00000559006 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
RAB8B-204ENST00000559006 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
RAB8B-204ENST00000559006 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■□□□□ 8.7
RAB8B-204ENST00000559006 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
RAB8B-204ENST00000559006 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RAB8B-204ENST00000559006 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
RAB8B-204ENST00000559006 FOXK1P85037 733 aa12.52□□□□□ -0.41
RAB8B-204ENST00000559006 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
RAB8B-204ENST00000559006 NUDT7P0C024 238 aa12.5□□□□□ -0.41
RAB8B-204ENST00000559006 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
RAB8B-204ENST00000559006 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
RAB8B-204ENST00000559006 DSG2Q14126 1118 aa12.45□□□□□ -0.42
RAB8B-204ENST00000559006 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
RAB8B-204ENST00000559006 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
RAB8B-204ENST00000559006 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
RAB8B-204ENST00000559006 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
RAB8B-204ENST00000559006 PBX2P40425 430 aa12.38□□□□□ -0.43
RAB8B-204ENST00000559006 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
RAB8B-204ENST00000559006 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
RAB8B-204ENST00000559006 TBC1D12O60347 775 aa12.36□□□□□ -0.43
RAB8B-204ENST00000559006 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAB8B-204ENST00000559006 PTGER2P43116 358 aa12.35□□□□□ -0.43
RAB8B-204ENST00000559006 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
RAB8B-204ENST00000559006 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
RAB8B-204ENST00000559006 PDE4AP27815 886 aa12.33□□□□□ -0.44
RAB8B-204ENST00000559006 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
RAB8B-204ENST00000559006 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
RAB8B-204ENST00000559006 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
RAB8B-204ENST00000559006 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
RAB8B-204ENST00000559006 PPP1R15BQ5SWA1 713 aa12.31□□□□□ -0.44
RAB8B-204ENST00000559006 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
RAB8B-204ENST00000559006 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
RAB8B-204ENST00000559006 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
RAB8B-204ENST00000559006 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB8B-204ENST00000559006 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
RAB8B-204ENST00000559006 MFSD10Q14728 455 aa12.23□□□□□ -0.45
RAB8B-204ENST00000559006 DDX27Q96GQ7 796 aaKnown RBP12.22□□□□□ -0.45
RAB8B-204ENST00000559006 TK2O00142 265 aa12.18□□□□□ -0.46
RAB8B-204ENST00000559006 ADGRD1Q6QNK2 874 aa12.18□□□□□ -0.46
RAB8B-204ENST00000559006 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
RAB8B-204ENST00000559006 PSEN2P49810 448 aa12.17□□□□□ -0.46
RAB8B-204ENST00000559006 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
RAB8B-204ENST00000559006 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
RAB8B-204ENST00000559006 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
RAB8B-204ENST00000559006 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
RAB8B-204ENST00000559006 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
RAB8B-204ENST00000559006 FOSBP53539 338 aa12.13□□□□□ -0.47
RAB8B-204ENST00000559006 HRO43593 1189 aa12.12□□□□□ -0.47
RAB8B-204ENST00000559006 EVI5O60447 810 aa12.12□□□□□ -0.47
RAB8B-204ENST00000559006 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
RAB8B-204ENST00000559006 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
RAB8B-204ENST00000559006 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
RAB8B-204ENST00000559006 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
RAB8B-204ENST00000559006 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
RAB8B-204ENST00000559006 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
RAB8B-204ENST00000559006 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
RAB8B-204ENST00000559006 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
RAB8B-204ENST00000559006 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
RAB8B-204ENST00000559006 PTPREP23469 700 aa12.04□□□□□ -0.48
RAB8B-204ENST00000559006 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
RAB8B-204ENST00000559006 VPS9D1Q9Y2B5 631 aa12.04□□□□□ -0.48
RAB8B-204ENST00000559006 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
RAB8B-204ENST00000559006 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
RAB8B-204ENST00000559006 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
RAB8B-204ENST00000559006 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
RAB8B-204ENST00000559006 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
RAB8B-204ENST00000559006 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
RAB8B-204ENST00000559006 PCDHGA10Q9Y5H3 936 aa11.98□□□□□ -0.49
RAB8B-204ENST00000559006 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
RAB8B-204ENST00000559006 PHF14O94880 888 aa11.95□□□□□ -0.5
RAB8B-204ENST00000559006 DPYSL4O14531 572 aa11.94□□□□□ -0.5
RAB8B-204ENST00000559006 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
RAB8B-204ENST00000559006 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
RAB8B-204ENST00000559006 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
RAB8B-204ENST00000559006 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
RAB8B-204ENST00000559006 EPAS1Q99814 870 aa11.9□□□□□ -0.5
RAB8B-204ENST00000559006 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
RAB8B-204ENST00000559006 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
RAB8B-204ENST00000559006 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms