RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ROCK1Q13464 1354 aa31.99■■■□□ 2.71
RCCD1-208ENST00000557266 DNMT1P26358 1616 aaKnown RBP31.97■■■□□ 2.71
RCCD1-208ENST00000557266 SUPT16HQ9Y5B9 1047 aaKnown RBP31.97■■■□□ 2.71
RCCD1-208ENST00000557266 ABCC5O15440 1437 aa31.97■■■□□ 2.71
RCCD1-208ENST00000557266 MPHOSPH9Q99550 1183 aa31.96■■■□□ 2.71
RCCD1-208ENST00000557266 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
RCCD1-208ENST00000557266 CDK11AQ9UQ88 783 aaPredicted RBP31.94■■■□□ 2.7
RCCD1-208ENST00000557266 ZNF644Q9H582 1327 aaPredicted RBP31.93■■■□□ 2.7
RCCD1-208ENST00000557266 CCER2I3L3R5 266 aa31.92■■■□□ 2.7
RCCD1-208ENST00000557266 ANP32CO43423 234 aa31.91■■■□□ 2.7
RCCD1-208ENST00000557266 TROQ12816 1431 aaPredicted RBP31.89■■■□□ 2.7
RCCD1-208ENST00000557266 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
RCCD1-208ENST00000557266 PLB1Q6P1J6 1458 aa31.89■■■□□ 2.7
RCCD1-208ENST00000557266 FOXD1Q16676 465 aa31.84■■■□□ 2.69
RCCD1-208ENST00000557266 CAMSAP2Q08AD1 1489 aa31.8■■■□□ 2.68
RCCD1-208ENST00000557266 ANKRD30BQ9BXX2 1392 aa31.8■■■□□ 2.68
RCCD1-208ENST00000557266 GPATCH8Q9UKJ3 1502 aaKnown RBP31.78■■■□□ 2.68
RCCD1-208ENST00000557266 ADCY10Q96PN6 1610 aa31.78■■■□□ 2.68
RCCD1-208ENST00000557266 HSPA5P11021 654 aaKnown RBP31.78■■■□□ 2.68
RCCD1-208ENST00000557266 L3MBTL2Q969R5 705 aa31.78■■■□□ 2.68
RCCD1-208ENST00000557266 KIF14Q15058 1648 aa31.77■■■□□ 2.68
RCCD1-208ENST00000557266 ITSN2Q9NZM3 1697 aa31.76■■■□□ 2.68
RCCD1-208ENST00000557266 RPRD2Q5VT52 1461 aaKnown RBP31.75■■■□□ 2.67
RCCD1-208ENST00000557266 CFDP1Q9UEE9 299 aaPredicted RBP31.75■■■□□ 2.67
RCCD1-208ENST00000557266 WASHC2AQ641Q2 1341 aa31.72■■■□□ 2.67
RCCD1-208ENST00000557266 ERCC6L2Q5T890 1561 aa31.72■■■□□ 2.67
RCCD1-208ENST00000557266 ABCA8O94911 1581 aa31.7■■■□□ 2.67
RCCD1-208ENST00000557266 TEX14Q8IWB6 1497 aa31.7■■■□□ 2.67
RCCD1-208ENST00000557266 EIF4G2P78344 907 aaKnown RBP eCLIP31.69■■■□□ 2.66
RCCD1-208ENST00000557266 NCOA1Q15788 1441 aa31.69■■■□□ 2.66
RCCD1-208ENST00000557266 SLC4A1APQ9BWU0 796 aaKnown RBP31.68■■■□□ 2.66
RCCD1-208ENST00000557266 PTPRGP23470 1445 aa31.67■■■□□ 2.66
RCCD1-208ENST00000557266 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
RCCD1-208ENST00000557266 PZPP20742 1482 aa31.66■■■□□ 2.66
RCCD1-208ENST00000557266 ADGRL2O95490 1459 aa31.66■■■□□ 2.66
RCCD1-208ENST00000557266 CROCC2H7BZ55 1655 aa31.64■■■□□ 2.66
RCCD1-208ENST00000557266 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
RCCD1-208ENST00000557266 ZNF777Q9ULD5 760 aaPredicted RBP31.61■■■□□ 2.65
RCCD1-208ENST00000557266 NBPF8Q3BBV2 869 aa31.6■■■□□ 2.65
RCCD1-208ENST00000557266 ATP10BO94823 1461 aa31.58■■■□□ 2.65
RCCD1-208ENST00000557266 ABCC10Q5T3U5 1492 aa31.56■■■□□ 2.64
RCCD1-208ENST00000557266 PLEKHD1A6NEE1 506 aa31.54■■■□□ 2.64
RCCD1-208ENST00000557266 ANKRD30AQ9BXX3 1397 aa31.53■■■□□ 2.64
RCCD1-208ENST00000557266 CNTLNQ9NXG0 1405 aa31.53■■■□□ 2.64
RCCD1-208ENST00000557266 CDC42BPAQ5VT25 1732 aa31.53■■■□□ 2.64
RCCD1-208ENST00000557266 C11orf95C9JLR9 678 aaPredicted RBP31.52■■■□□ 2.64
RCCD1-208ENST00000557266 CCDC7Q96M83 1385 aa31.51■■■□□ 2.63
RCCD1-208ENST00000557266 KIAA1107Q9UPP5 1409 aa31.5■■■□□ 2.63
RCCD1-208ENST00000557266 SPATA31E1Q6ZUB1 1445 aa31.49■■■□□ 2.63
RCCD1-208ENST00000557266 FKBP8Q14318 412 aa31.48■■■□□ 2.63
RCCD1-208ENST00000557266 SHANK2Q9UPX8 1470 aa31.47■■■□□ 2.63
RCCD1-208ENST00000557266 ANKRD50Q9ULJ7 1429 aa31.47■■■□□ 2.63
RCCD1-208ENST00000557266 ABCC2Q92887 1545 aa31.46■■■□□ 2.63
RCCD1-208ENST00000557266 MBD5Q9P267 1494 aa31.45■■■□□ 2.63
RCCD1-208ENST00000557266 C9orf84Q5VXU9 1444 aa31.43■■■□□ 2.62
RCCD1-208ENST00000557266 PKD2Q13563 968 aa31.41■■■□□ 2.62
RCCD1-208ENST00000557266 BCANQ96GW7 911 aa31.4■■■□□ 2.62
RCCD1-208ENST00000557266 UHRF1BP1LA0JNW5 1464 aa31.38■■■□□ 2.61
RCCD1-208ENST00000557266 KIF7Q2M1P5 1343 aa31.36■■■□□ 2.61
RCCD1-208ENST00000557266 NEFLP07196 543 aa31.34■■■□□ 2.61
RCCD1-208ENST00000557266 HNRNPUQ00839 825 aaKnown RBP eCLIP31.34■■■□□ 2.61
RCCD1-208ENST00000557266 POLR1AO95602 1720 aaPredicted RBP31.34■■■□□ 2.61
RCCD1-208ENST00000557266 TSHZ2Q9NRE2 1034 aa31.33■■■□□ 2.61
RCCD1-208ENST00000557266 PRKRIP1Q9H875 184 aaPredicted RBP31.32■■■□□ 2.6
RCCD1-208ENST00000557266 ARHGEF5Q12774 1597 aa31.31■■■□□ 2.6
RCCD1-208ENST00000557266 KDM5DQ9BY66 1539 aa31.31■■■□□ 2.6
RCCD1-208ENST00000557266 NUP155O75694 1391 aa31.31■■■□□ 2.6
RCCD1-208ENST00000557266 CCDC184Q52MB2 194 aa31.3■■■□□ 2.6
RCCD1-208ENST00000557266 TSPY4P0CV99 314 aa31.29■■■□□ 2.6
RCCD1-208ENST00000557266 TSPY10P0CW01 314 aa31.29■■■□□ 2.6
RCCD1-208ENST00000557266 KIF15Q9NS87 1388 aa31.27■■■□□ 2.6
RCCD1-208ENST00000557266 HNRNPMP52272 730 aaKnown RBP eCLIP31.27■■■□□ 2.68e-13■■■□□ 16.5
RCCD1-208ENST00000557266 ZCCHC11Q5TAX3 1644 aaKnown RBP31.26■■■□□ 2.59
RCCD1-208ENST00000557266 SAMD9LQ8IVG5 1584 aa31.24■■■□□ 2.59
RCCD1-208ENST00000557266 USP47Q96K76 1375 aa31.23■■■□□ 2.59
RCCD1-208ENST00000557266 PREX2Q70Z35 1606 aa31.23■■■□□ 2.59
RCCD1-208ENST00000557266 ZNF326Q5BKZ1 582 aaKnown RBP31.21■■■□□ 2.59
RCCD1-208ENST00000557266 UHRF1BP1Q6BDS2 1440 aa31.21■■■□□ 2.59
RCCD1-208ENST00000557266 CCDC141Q6ZP82 1450 aa31.21■■■□□ 2.59
RCCD1-208ENST00000557266 CDC42BPBQ9Y5S2 1711 aa31.21■■■□□ 2.59
RCCD1-208ENST00000557266 KDM5CP41229 1560 aa31.19■■■□□ 2.58
RCCD1-208ENST00000557266 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
RCCD1-208ENST00000557266 ARHGEF12Q9NZN5 1544 aa31.18■■■□□ 2.58
RCCD1-208ENST00000557266 RALGAPBQ86X10 1494 aa31.16■■■□□ 2.58
RCCD1-208ENST00000557266 MRS2Q9HD23 443 aa31.15■■■□□ 2.58
RCCD1-208ENST00000557266 DHX29Q7Z478 1369 aaKnown RBP31.12■■■□□ 2.57
RCCD1-208ENST00000557266 TTC37Q6PGP7 1564 aa31.11■■■□□ 2.57
RCCD1-208ENST00000557266 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
RCCD1-208ENST00000557266 SYCP2Q9BX26 1530 aa31.09■■■□□ 2.57
RCCD1-208ENST00000557266 FAM135AQ9P2D6 1515 aa31.09■■■□□ 2.57
RCCD1-208ENST00000557266 FAM9BQ8IZU0 186 aa31.09■■■□□ 2.57
RCCD1-208ENST00000557266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.08■■■□□ 2.57
RCCD1-208ENST00000557266 ARID4BQ4LE39 1312 aaPredicted RBP31.07■■■□□ 2.56
RCCD1-208ENST00000557266 ARHGAP5Q13017 1502 aa31.05■■■□□ 2.56
RCCD1-208ENST00000557266 MAST1Q9Y2H9 1570 aa31.04■■■□□ 2.56
RCCD1-208ENST00000557266 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
RCCD1-208ENST00000557266 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
RCCD1-208ENST00000557266 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
RCCD1-208ENST00000557266 CARD11Q9BXL7 1154 aa31.02■■■□□ 2.56
RCCD1-208ENST00000557266 ZBED9Q6R2W3 1325 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms