RNA–Protein interactions for RNA: ENST00000557069.1

RALGAPA1-216, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 2

Gene RALGAPA1, Length 467 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-216ENST00000557069 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
RALGAPA1-216ENST00000557069 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
RALGAPA1-216ENST00000557069 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
RALGAPA1-216ENST00000557069 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
RALGAPA1-216ENST00000557069 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
RALGAPA1-216ENST00000557069 ERBB3P21860 1342 aa10.31□□□□□ -0.76
RALGAPA1-216ENST00000557069 PPP1R37O75864 691 aa10.29□□□□□ -0.76
RALGAPA1-216ENST00000557069 HS6ST3Q8IZP7 471 aa10.29□□□□□ -0.76
RALGAPA1-216ENST00000557069 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
RALGAPA1-216ENST00000557069 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
RALGAPA1-216ENST00000557069 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
RALGAPA1-216ENST00000557069 ARSIQ5FYB1 569 aa10.25□□□□□ -0.77
RALGAPA1-216ENST00000557069 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
RALGAPA1-216ENST00000557069 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
RALGAPA1-216ENST00000557069 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
RALGAPA1-216ENST00000557069 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
RALGAPA1-216ENST00000557069 KIF3CO14782 793 aa10.22□□□□□ -0.77
RALGAPA1-216ENST00000557069 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.771e-7■■■■■ 27
RALGAPA1-216ENST00000557069 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
RALGAPA1-216ENST00000557069 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
RALGAPA1-216ENST00000557069 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
RALGAPA1-216ENST00000557069 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
RALGAPA1-216ENST00000557069 NUDT7P0C024 238 aa10.14□□□□□ -0.79
RALGAPA1-216ENST00000557069 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
RALGAPA1-216ENST00000557069 ZNF316A6NFI3 1004 aaPredicted RBP10.13□□□□□ -0.79
RALGAPA1-216ENST00000557069 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
RALGAPA1-216ENST00000557069 PCDHGA4Q9Y5G9 962 aa10.12□□□□□ -0.79
RALGAPA1-216ENST00000557069 DNAJC5Q9H3Z4 198 aa10.11□□□□□ -0.79
RALGAPA1-216ENST00000557069 SLC34A2O95436 690 aa10.1□□□□□ -0.79
RALGAPA1-216ENST00000557069 PLPP6Q8IY26 295 aa10.1□□□□□ -0.79
RALGAPA1-216ENST00000557069 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
RALGAPA1-216ENST00000557069 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
RALGAPA1-216ENST00000557069 FOXK1P85037 733 aa10.07□□□□□ -0.8
RALGAPA1-216ENST00000557069 DSG2Q14126 1118 aa10.06□□□□□ -0.8
RALGAPA1-216ENST00000557069 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
RALGAPA1-216ENST00000557069 GTPBP6O43824 516 aaPredicted RBP10.03□□□□□ -0.8
RALGAPA1-216ENST00000557069 TBC1D12O60347 775 aa10.03□□□□□ -0.8
RALGAPA1-216ENST00000557069 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
RALGAPA1-216ENST00000557069 PDE4AP27815 886 aa9.99□□□□□ -0.81
RALGAPA1-216ENST00000557069 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
RALGAPA1-216ENST00000557069 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
RALGAPA1-216ENST00000557069 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
RALGAPA1-216ENST00000557069 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
RALGAPA1-216ENST00000557069 RNF166Q96A37 237 aaPredicted RBP9.97□□□□□ -0.81
RALGAPA1-216ENST00000557069 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
RALGAPA1-216ENST00000557069 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
RALGAPA1-216ENST00000557069 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
RALGAPA1-216ENST00000557069 PBX2P40425 430 aa9.95□□□□□ -0.82
RALGAPA1-216ENST00000557069 LARP6Q9BRS8 491 aaKnown RBP9.95□□□□□ -0.82
RALGAPA1-216ENST00000557069 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
RALGAPA1-216ENST00000557069 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
RALGAPA1-216ENST00000557069 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
RALGAPA1-216ENST00000557069 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
RALGAPA1-216ENST00000557069 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
RALGAPA1-216ENST00000557069 PTGER2P43116 358 aa9.91□□□□□ -0.82
RALGAPA1-216ENST00000557069 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
RALGAPA1-216ENST00000557069 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
RALGAPA1-216ENST00000557069 PSEN2P49810 448 aa9.87□□□□□ -0.83
RALGAPA1-216ENST00000557069 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
RALGAPA1-216ENST00000557069 ZNF454Q8N9F8 522 aa9.86□□□□□ -0.83
RALGAPA1-216ENST00000557069 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
RALGAPA1-216ENST00000557069 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
RALGAPA1-216ENST00000557069 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
RALGAPA1-216ENST00000557069 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
RALGAPA1-216ENST00000557069 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
RALGAPA1-216ENST00000557069 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
RALGAPA1-216ENST00000557069 EVI5O60447 810 aa9.83□□□□□ -0.84
RALGAPA1-216ENST00000557069 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
RALGAPA1-216ENST00000557069 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
RALGAPA1-216ENST00000557069 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
RALGAPA1-216ENST00000557069 MFSD10Q14728 455 aa9.81□□□□□ -0.84
RALGAPA1-216ENST00000557069 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
RALGAPA1-216ENST00000557069 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
RALGAPA1-216ENST00000557069 TK2O00142 265 aa9.78□□□□□ -0.84
RALGAPA1-216ENST00000557069 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
RALGAPA1-216ENST00000557069 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
RALGAPA1-216ENST00000557069 FOSBP53539 338 aa9.77□□□□□ -0.85
RALGAPA1-216ENST00000557069 PTPREP23469 700 aa9.75□□□□□ -0.85
RALGAPA1-216ENST00000557069 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
RALGAPA1-216ENST00000557069 ZDHHC16Q969W1 377 aa9.74□□□□□ -0.85
RALGAPA1-216ENST00000557069 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
RALGAPA1-216ENST00000557069 CFAP44Q96MT7 982 aa9.74□□□□□ -0.85
RALGAPA1-216ENST00000557069 HRO43593 1189 aa9.73□□□□□ -0.85
RALGAPA1-216ENST00000557069 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
RALGAPA1-216ENST00000557069 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
RALGAPA1-216ENST00000557069 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
RALGAPA1-216ENST00000557069 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
RALGAPA1-216ENST00000557069 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
RALGAPA1-216ENST00000557069 DPYSL4O14531 572 aa9.7□□□□□ -0.86
RALGAPA1-216ENST00000557069 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
RALGAPA1-216ENST00000557069 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
RALGAPA1-216ENST00000557069 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
RALGAPA1-216ENST00000557069 ZBED2Q9BTP6 218 aa9.66□□□□□ -0.86
RALGAPA1-216ENST00000557069 SLC4A5Q9BY07 1137 aa9.66□□□□□ -0.86
RALGAPA1-216ENST00000557069 PHF14O94880 888 aa9.65□□□□□ -0.86
RALGAPA1-216ENST00000557069 TYW1BQ6NUM6 668 aa9.65□□□□□ -0.86
RALGAPA1-216ENST00000557069 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
RALGAPA1-216ENST00000557069 PTPN5P54829 565 aa9.63□□□□□ -0.87
RALGAPA1-216ENST00000557069 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
RALGAPA1-216ENST00000557069 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms