RNA–Protein interactions for RNA: ENST00000556925.5

NEMF-213, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 3,699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-213ENST00000556925 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
NEMF-213ENST00000556925 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
NEMF-213ENST00000556925 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
NEMF-213ENST00000556925 TPM2P07951 284 aa11.9□□□□□ -0.5
NEMF-213ENST00000556925 ANP32BQ92688 251 aaKnown RBP11.9□□□□□ -0.5
NEMF-213ENST00000556925 CERS3Q8IU89 383 aa11.89□□□□□ -0.51
NEMF-213ENST00000556925 APPP05067 770 aa11.89□□□□□ -0.51
NEMF-213ENST00000556925 HMGB1P09429 215 aaKnown RBP11.89□□□□□ -0.51
NEMF-213ENST00000556925 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
NEMF-213ENST00000556925 ZBTB22O15209 634 aa11.87□□□□□ -0.51
NEMF-213ENST00000556925 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
NEMF-213ENST00000556925 PHF14O94880 888 aa11.86□□□□□ -0.51
NEMF-213ENST00000556925 NFKBIBQ15653 356 aa11.85□□□□□ -0.51
NEMF-213ENST00000556925 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
NEMF-213ENST00000556925 AXDND1Q5T1B0 1012 aaPredicted RBP11.85□□□□□ -0.51
NEMF-213ENST00000556925 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
NEMF-213ENST00000556925 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
NEMF-213ENST00000556925 DNTTIP2Q5QJE6 756 aaKnown RBP11.84□□□□□ -0.51
NEMF-213ENST00000556925 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
NEMF-213ENST00000556925 KIF20AO95235 890 aa11.82□□□□□ -0.52
NEMF-213ENST00000556925 PSMD1Q99460 953 aa11.82□□□□□ -0.52
NEMF-213ENST00000556925 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
NEMF-213ENST00000556925 OS9Q13438 667 aaPredicted RBP11.82□□□□□ -0.52
NEMF-213ENST00000556925 PLCB2Q00722 1185 aa11.81□□□□□ -0.52
NEMF-213ENST00000556925 ARID3AQ99856 593 aa11.81□□□□□ -0.52
NEMF-213ENST00000556925 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
NEMF-213ENST00000556925 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
NEMF-213ENST00000556925 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
NEMF-213ENST00000556925 PTMSP20962 102 aa11.8□□□□□ -0.52
NEMF-213ENST00000556925 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
NEMF-213ENST00000556925 IRF6O14896 467 aa11.78□□□□□ -0.52
NEMF-213ENST00000556925 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
NEMF-213ENST00000556925 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
NEMF-213ENST00000556925 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
NEMF-213ENST00000556925 RIPK4P57078 832 aa11.76□□□□□ -0.53
NEMF-213ENST00000556925 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
NEMF-213ENST00000556925 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
NEMF-213ENST00000556925 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
NEMF-213ENST00000556925 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
NEMF-213ENST00000556925 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
NEMF-213ENST00000556925 DNAJC2Q99543 621 aaKnown RBP11.74□□□□□ -0.53
NEMF-213ENST00000556925 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
NEMF-213ENST00000556925 TAF3Q5VWG9 929 aa11.74□□□□□ -0.53
NEMF-213ENST00000556925 ZNF526Q8TF50 670 aaPredicted RBP11.74□□□□□ -0.53
NEMF-213ENST00000556925 LETM1O95202 739 aaPredicted RBP11.73□□□□□ -0.53
NEMF-213ENST00000556925 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
NEMF-213ENST00000556925 MPNDQ8N594 471 aa11.73□□□□□ -0.53
NEMF-213ENST00000556925 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
NEMF-213ENST00000556925 GTPBP4Q9BZE4 634 aaKnown RBP11.72□□□□□ -0.53
NEMF-213ENST00000556925 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
NEMF-213ENST00000556925 RALBP1Q15311 655 aa11.72□□□□□ -0.53
NEMF-213ENST00000556925 GEMIN8Q9NWZ8 242 aaKnown RBP11.72□□□□□ -0.53
NEMF-213ENST00000556925 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
NEMF-213ENST00000556925 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
NEMF-213ENST00000556925 ANAPC15P60006 121 aa11.71□□□□□ -0.54
NEMF-213ENST00000556925 ZBTB9Q96C00 473 aa11.71□□□□□ -0.54
NEMF-213ENST00000556925 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
NEMF-213ENST00000556925 YY1AP1Q9H869 796 aa11.7□□□□□ -0.54
NEMF-213ENST00000556925 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
NEMF-213ENST00000556925 GPATCH11Q8N954 259 aa11.68□□□□□ -0.54
NEMF-213ENST00000556925 KIAA1211Q6ZU35 1233 aa11.68□□□□□ -0.54
NEMF-213ENST00000556925 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
NEMF-213ENST00000556925 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
NEMF-213ENST00000556925 L1TD1Q5T7N2 865 aaKnown RBP11.66□□□□□ -0.54
NEMF-213ENST00000556925 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
NEMF-213ENST00000556925 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
NEMF-213ENST00000556925 CGNQ9P2M7 1197 aaKnown RBP11.65□□□□□ -0.54
NEMF-213ENST00000556925 CEP120Q8N960 986 aa11.65□□□□□ -0.54
NEMF-213ENST00000556925 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
NEMF-213ENST00000556925 ESPNB1AK53 854 aa11.63□□□□□ -0.55
NEMF-213ENST00000556925 RGL3Q3MIN7 710 aa11.63□□□□□ -0.55
NEMF-213ENST00000556925 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
NEMF-213ENST00000556925 MAFGO15525 162 aa11.62□□□□□ -0.55
NEMF-213ENST00000556925 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
NEMF-213ENST00000556925 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
NEMF-213ENST00000556925 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
NEMF-213ENST00000556925 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
NEMF-213ENST00000556925 TERF1P54274 439 aa11.62□□□□□ -0.55
NEMF-213ENST00000556925 XRCC6P12956 609 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEMF-213ENST00000556925 MLECQ14165 292 aa11.61□□□□□ -0.55
NEMF-213ENST00000556925 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
NEMF-213ENST00000556925 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
NEMF-213ENST00000556925 STK26Q9P289 416 aa11.6□□□□□ -0.55
NEMF-213ENST00000556925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
NEMF-213ENST00000556925 NBPF11Q86T75 865 aa11.59□□□□□ -0.55
NEMF-213ENST00000556925 NBPF1Q3BBV0 1214 aa11.59□□□□□ -0.55
NEMF-213ENST00000556925 POGKQ9P215 609 aa11.59□□□□□ -0.55
NEMF-213ENST00000556925 GOLGA6L3A6NEY3 463 aa11.58□□□□□ -0.56
NEMF-213ENST00000556925 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
NEMF-213ENST00000556925 HSP90AB3PQ58FF7 597 aa11.58□□□□□ -0.56
NEMF-213ENST00000556925 RNF217Q8TC41 542 aa11.57□□□□□ -0.56
NEMF-213ENST00000556925 PANK2Q9BZ23 570 aa11.56□□□□□ -0.56
NEMF-213ENST00000556925 TTC36A6NLP5 189 aa11.56□□□□□ -0.56
NEMF-213ENST00000556925 EEA1Q15075 1411 aa11.55□□□□□ -0.56
NEMF-213ENST00000556925 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
NEMF-213ENST00000556925 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
NEMF-213ENST00000556925 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
NEMF-213ENST00000556925 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
NEMF-213ENST00000556925 KCNJ4P48050 445 aa11.55□□□□□ -0.56
NEMF-213ENST00000556925 CT47A1Q5JQC4 288 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms