RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
FOXN3-213ENST00000556916 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
FOXN3-213ENST00000556916 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
FOXN3-213ENST00000556916 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
FOXN3-213ENST00000556916 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
FOXN3-213ENST00000556916 HOXB1P14653 301 aaPredicted RBP9.83□□□□□ -0.84
FOXN3-213ENST00000556916 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
FOXN3-213ENST00000556916 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
FOXN3-213ENST00000556916 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
FOXN3-213ENST00000556916 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
FOXN3-213ENST00000556916 ERBB3P21860 1342 aa9.76□□□□□ -0.85
FOXN3-213ENST00000556916 C2orf72A6NCS6 295 aa9.75□□□□□ -0.85
FOXN3-213ENST00000556916 KIF3CO14782 793 aa9.74□□□□□ -0.85
FOXN3-213ENST00000556916 PPP1R37O75864 691 aa9.74□□□□□ -0.85
FOXN3-213ENST00000556916 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
FOXN3-213ENST00000556916 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
FOXN3-213ENST00000556916 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
FOXN3-213ENST00000556916 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
FOXN3-213ENST00000556916 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
FOXN3-213ENST00000556916 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.865e-7■■■■□ 21.2
FOXN3-213ENST00000556916 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
FOXN3-213ENST00000556916 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
FOXN3-213ENST00000556916 NUDT7P0C024 238 aa9.62□□□□□ -0.87
FOXN3-213ENST00000556916 ZNF687Q8N1G0 1237 aa9.62□□□□□ -0.87
FOXN3-213ENST00000556916 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
FOXN3-213ENST00000556916 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
FOXN3-213ENST00000556916 SLC34A2O95436 690 aa9.6□□□□□ -0.87
FOXN3-213ENST00000556916 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
FOXN3-213ENST00000556916 FOXK1P85037 733 aa9.56□□□□□ -0.88
FOXN3-213ENST00000556916 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
FOXN3-213ENST00000556916 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
FOXN3-213ENST00000556916 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
FOXN3-213ENST00000556916 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
FOXN3-213ENST00000556916 DSG2Q14126 1118 aa9.54□□□□□ -0.88
FOXN3-213ENST00000556916 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
FOXN3-213ENST00000556916 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.895e-7■■■□□ 16.1
FOXN3-213ENST00000556916 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
FOXN3-213ENST00000556916 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
FOXN3-213ENST00000556916 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
FOXN3-213ENST00000556916 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
FOXN3-213ENST00000556916 GTPBP6O43824 516 aaPredicted RBP9.48□□□□□ -0.89
FOXN3-213ENST00000556916 PBX2P40425 430 aa9.48□□□□□ -0.89
FOXN3-213ENST00000556916 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
FOXN3-213ENST00000556916 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
FOXN3-213ENST00000556916 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
FOXN3-213ENST00000556916 PPP1R15BQ5SWA1 713 aa9.45□□□□□ -0.9
FOXN3-213ENST00000556916 UPF1Q92900 1129 aaKnown RBP eCLIP9.45□□□□□ -0.9
FOXN3-213ENST00000556916 NCKAP5LQ9HCH0 1330 aa9.45□□□□□ -0.9
FOXN3-213ENST00000556916 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
FOXN3-213ENST00000556916 PTGER2P43116 358 aa9.44□□□□□ -0.9
FOXN3-213ENST00000556916 TBC1D12O60347 775 aa9.43□□□□□ -0.9
FOXN3-213ENST00000556916 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
FOXN3-213ENST00000556916 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
FOXN3-213ENST00000556916 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
FOXN3-213ENST00000556916 PDE4AP27815 886 aa9.39□□□□□ -0.91
FOXN3-213ENST00000556916 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
FOXN3-213ENST00000556916 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
FOXN3-213ENST00000556916 PSEN2P49810 448 aa9.36□□□□□ -0.91
FOXN3-213ENST00000556916 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
FOXN3-213ENST00000556916 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
FOXN3-213ENST00000556916 MFSD10Q14728 455 aa9.34□□□□□ -0.91
FOXN3-213ENST00000556916 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
FOXN3-213ENST00000556916 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
FOXN3-213ENST00000556916 KCNK17Q96T54 332 aa9.33□□□□□ -0.92
FOXN3-213ENST00000556916 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
FOXN3-213ENST00000556916 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
FOXN3-213ENST00000556916 TK2O00142 265 aa9.3□□□□□ -0.92
FOXN3-213ENST00000556916 EVI5O60447 810 aa9.29□□□□□ -0.92
FOXN3-213ENST00000556916 FOSBP53539 338 aa9.29□□□□□ -0.92
FOXN3-213ENST00000556916 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
FOXN3-213ENST00000556916 HRO43593 1189 aa9.27□□□□□ -0.93
FOXN3-213ENST00000556916 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-213ENST00000556916 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
FOXN3-213ENST00000556916 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
FOXN3-213ENST00000556916 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
FOXN3-213ENST00000556916 BBXQ8WY36 941 aaPredicted RBP9.26□□□□□ -0.93
FOXN3-213ENST00000556916 ANO8Q9HCE9 1232 aaPredicted RBP9.25□□□□□ -0.93
FOXN3-213ENST00000556916 PTPREP23469 700 aa9.23□□□□□ -0.93
FOXN3-213ENST00000556916 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
FOXN3-213ENST00000556916 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
FOXN3-213ENST00000556916 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
FOXN3-213ENST00000556916 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
FOXN3-213ENST00000556916 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
FOXN3-213ENST00000556916 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
FOXN3-213ENST00000556916 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
FOXN3-213ENST00000556916 DPYSL4O14531 572 aa9.18□□□□□ -0.94
FOXN3-213ENST00000556916 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
FOXN3-213ENST00000556916 PCDHGA10Q9Y5H3 936 aa9.18□□□□□ -0.94
FOXN3-213ENST00000556916 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
FOXN3-213ENST00000556916 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
FOXN3-213ENST00000556916 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
FOXN3-213ENST00000556916 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
FOXN3-213ENST00000556916 PHF14O94880 888 aa9.14□□□□□ -0.95
FOXN3-213ENST00000556916 TYW1BQ6NUM6 668 aa9.14□□□□□ -0.95
FOXN3-213ENST00000556916 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
FOXN3-213ENST00000556916 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
FOXN3-213ENST00000556916 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-213ENST00000556916 COL9A1P20849 921 aa9.11□□□□□ -0.95
FOXN3-213ENST00000556916 PROX2Q3B8N5 592 aa9.11□□□□□ -0.95
FOXN3-213ENST00000556916 PAXIP1Q6ZW49 1069 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms