RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 ZNF316A6NFI3 1004 aaPredicted RBP2.45□□□□□ -2.02
KTN1-224ENST00000556631 NPHP1O15259 732 aa2.45□□□□□ -2.02
KTN1-224ENST00000556631 B4GALNT3Q6L9W6 998 aa2.45□□□□□ -2.02
KTN1-224ENST00000556631 PRPF38AQ8NAV1 312 aaKnown RBP2.45□□□□□ -2.02
KTN1-224ENST00000556631 IFNLR1Q8IU57 520 aaPredicted RBP2.45□□□□□ -2.02
KTN1-224ENST00000556631 STK24Q9Y6E0 443 aa2.45□□□□□ -2.02
KTN1-224ENST00000556631 ANAPC15P60006 121 aa2.44□□□□□ -2.02
KTN1-224ENST00000556631 RNF39Q9H2S5 420 aa2.44□□□□□ -2.02
KTN1-224ENST00000556631 TCERG1O14776 1098 aaKnown RBP2.44□□□□□ -2.02
KTN1-224ENST00000556631 L1TD1Q5T7N2 865 aaKnown RBP2.44□□□□□ -2.02
KTN1-224ENST00000556631 ANKRD13AQ8IZ07 590 aa2.44□□□□□ -2.02
KTN1-224ENST00000556631 SETQ01105 290 aaPredicted RBP2.44□□□□□ -2.02
KTN1-224ENST00000556631 STAG3Q9UJ98 1225 aa2.44□□□□□ -2.02
KTN1-224ENST00000556631 MYH16Q9H6N6 1097 aa2.44□□□□□ -2.02
KTN1-224ENST00000556631 ARID3CA6NKF2 412 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 TTLL12Q14166 644 aaPredicted RBP2.43□□□□□ -2.02
KTN1-224ENST00000556631 PUS7Q96PZ0 661 aaKnown RBP2.43□□□□□ -2.02
KTN1-224ENST00000556631 NAP1L4Q99733 375 aaKnown RBP2.43□□□□□ -2.02
KTN1-224ENST00000556631 NPM1P06748 294 aaKnown RBP eCLIP2.43□□□□□ -2.02
KTN1-224ENST00000556631 MFAP1P55081 439 aaKnown RBP2.43□□□□□ -2.02
KTN1-224ENST00000556631 GOLGA2Q08379 1002 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 PABPN1Q86U42 306 aaKnown RBP eCLIP2.43□□□□□ -2.02
KTN1-224ENST00000556631 CHMP4AQ9BY43 222 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 G3V3G9 751 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 NEFHP12036 1026 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 GSE1Q14687 1217 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 WDR43Q15061 677 aaKnown RBP eCLIP2.43□□□□□ -2.02
KTN1-224ENST00000556631 SERPINA10Q9UK55 444 aa2.43□□□□□ -2.02
KTN1-224ENST00000556631 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
KTN1-224ENST00000556631 PPP4R4Q6NUP7 873 aa2.42□□□□□ -2.02
KTN1-224ENST00000556631 CCDC27Q2M243 656 aa2.42□□□□□ -2.02
KTN1-224ENST00000556631 CCAR1Q8IX12 1150 aaKnown RBP2.42□□□□□ -2.02
KTN1-224ENST00000556631 BIN2Q9UBW5 565 aaPredicted RBP2.42□□□□□ -2.02
KTN1-224ENST00000556631 MTMR7Q9Y216 660 aa2.42□□□□□ -2.02
KTN1-224ENST00000556631 TSR1Q2NL82 804 aaKnown RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 CUX2O14529 1486 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 ANP32AP39687 249 aaKnown RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 FOXD4L5Q5VV16 416 aaPredicted RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 GOLGA6L1Q8N7Z2 621 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 UBE2Q2Q8WVN8 375 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 FOXD4L4Q8WXT5 416 aaPredicted RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 ANKRD62A6NC57 917 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 SLKQ9H2G2 1235 aaPredicted RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 R3HCC1Q9Y3T6 440 aaKnown RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 CLGNO14967 610 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 GNL2Q13823 731 aaKnown RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 DIEXFQ68CQ4 756 aaKnown RBP2.41□□□□□ -2.02
KTN1-224ENST00000556631 FAM13BQ9NYF5 915 aa2.41□□□□□ -2.02
KTN1-224ENST00000556631 PPP1R12AO14974 1030 aaPredicted RBP2.4□□□□□ -2.02
KTN1-224ENST00000556631 TTC16Q8NEE8 873 aa2.4□□□□□ -2.02
KTN1-224ENST00000556631 CEP89Q96ST8 783 aa2.4□□□□□ -2.02
KTN1-224ENST00000556631 WWC3Q9ULE0 1092 aa2.4□□□□□ -2.02
KTN1-224ENST00000556631 PLIN1O60240 522 aa2.4□□□□□ -2.02
KTN1-224ENST00000556631 TRHP20396 242 aaPredicted RBP2.4□□□□□ -2.02
KTN1-224ENST00000556631 AXDND1Q5T1B0 1012 aaPredicted RBP2.4□□□□□ -2.02
KTN1-224ENST00000556631 CALR3Q96L12 384 aaKnown RBP2.4□□□□□ -2.02
KTN1-224ENST00000556631 DNAJC5Q9H3Z4 198 aa2.4□□□□□ -2.02
KTN1-224ENST00000556631 SAFB2Q14151 953 aaKnown RBP eCLIP2.4□□□□□ -2.03
KTN1-224ENST00000556631 PCGF6Q9BYE7 350 aa2.4□□□□□ -2.03
KTN1-224ENST00000556631 ZNF777Q9ULD5 760 aaPredicted RBP2.4□□□□□ -2.03
KTN1-224ENST00000556631 PKNOX2Q96KN3 472 aa2.4□□□□□ -2.03
KTN1-224ENST00000556631 SLC24A3Q9HC58 644 aa2.4□□□□□ -2.03
KTN1-224ENST00000556631 ZBTB12Q9Y330 459 aaPredicted RBP2.4□□□□□ -2.03
KTN1-224ENST00000556631 BRD3Q15059 726 aa2.4□□□□□ -2.03
KTN1-224ENST00000556631 ZNF592Q92610 1267 aa2.4□□□□□ -2.03
KTN1-224ENST00000556631 ESF1Q9H501 851 aaKnown RBP2.4□□□□□ -2.03
KTN1-224ENST00000556631 HSP90AB2PQ58FF8 381 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 HSP90AB1P08238 724 aaKnown RBP2.39□□□□□ -2.03
KTN1-224ENST00000556631 AAMPQ13685 434 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 TRIM34Q9BYJ4 488 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 NUTM2FA1L443 756 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 GOLGA6L6A8MZA4 724 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 GOLGA6L22H0YM25 854 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 GPATCH11Q8N954 259 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 FAM212AQ96EL1 285 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 DDRGK1Q96HY6 314 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 RFX1P22670 979 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 TICAM2Q86XR7 235 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 TMC1Q8TDI8 760 aa2.39□□□□□ -2.03
KTN1-224ENST00000556631 NRDCO43847 1150 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 SH3BP5O60239 455 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 GPIHBP1Q8IV16 184 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 IGBP1P78318 339 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 SF3A1Q15459 793 aaKnown RBP2.38□□□□□ -2.03
KTN1-224ENST00000556631 HSP90AB4PQ58FF6 505 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 CCDC82Q8N4S0 544 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 CWC22Q9HCG8 908 aaKnown RBP2.38□□□□□ -2.03
KTN1-224ENST00000556631 ZNF330Q9Y3S2 320 aaPredicted RBP2.38□□□□□ -2.03
KTN1-224ENST00000556631 HMGN5P82970 282 aaKnown RBP2.38□□□□□ -2.03
KTN1-224ENST00000556631 PNMA1Q8ND90 353 aa2.38□□□□□ -2.03
KTN1-224ENST00000556631 hCG_2014768A0A024R1R8 64 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 RNF187Q5TA31 235 aaPredicted RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 MRS2Q9HD23 443 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 TMA7Q9Y2S6 64 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 U2SURPO15042 1029 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 MEX3CQ5U5Q3 659 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 TCEAL9Q9UHQ7 104 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 HRCP23327 699 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 SRPK2P78362 688 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms