RNA–Protein interactions for RNA: ENST00000555787.1

PSMC1-206, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 2,246 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-206ENST00000555787 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
PSMC1-206ENST00000555787 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
PSMC1-206ENST00000555787 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
PSMC1-206ENST00000555787 RAD21O60216 631 aa12.07□□□□□ -0.48
PSMC1-206ENST00000555787 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
PSMC1-206ENST00000555787 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
PSMC1-206ENST00000555787 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
PSMC1-206ENST00000555787 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-206ENST00000555787 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-206ENST00000555787 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
PSMC1-206ENST00000555787 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
PSMC1-206ENST00000555787 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
PSMC1-206ENST00000555787 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
PSMC1-206ENST00000555787 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
PSMC1-206ENST00000555787 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
PSMC1-206ENST00000555787 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
PSMC1-206ENST00000555787 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
PSMC1-206ENST00000555787 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
PSMC1-206ENST00000555787 TRAK2O60296 914 aa11.97□□□□□ -0.49
PSMC1-206ENST00000555787 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
PSMC1-206ENST00000555787 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
PSMC1-206ENST00000555787 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
PSMC1-206ENST00000555787 RBM25P49756 843 aaKnown RBP11.91□□□□□ -0.5
PSMC1-206ENST00000555787 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-206ENST00000555787 POM121Q96HA1 1249 aa11.9□□□□□ -0.51
PSMC1-206ENST00000555787 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
PSMC1-206ENST00000555787 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
PSMC1-206ENST00000555787 FLIIQ13045 1269 aa11.87□□□□□ -0.51
PSMC1-206ENST00000555787 WIZO95785 1651 aa11.87□□□□□ -0.51
PSMC1-206ENST00000555787 PARP9Q8IXQ6 854 aa11.86□□□□□ -0.51
PSMC1-206ENST00000555787 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
PSMC1-206ENST00000555787 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
PSMC1-206ENST00000555787 IRF5Q13568 498 aa11.85□□□□□ -0.51
PSMC1-206ENST00000555787 EFCAB3Q8N7B9 438 aa11.84□□□□□ -0.51
PSMC1-206ENST00000555787 GPR37O15354 613 aa11.84□□□□□ -0.51
PSMC1-206ENST00000555787 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
PSMC1-206ENST00000555787 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
PSMC1-206ENST00000555787 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
PSMC1-206ENST00000555787 TRAIPQ9BWF2 469 aa11.83□□□□□ -0.52
PSMC1-206ENST00000555787 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
PSMC1-206ENST00000555787 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
PSMC1-206ENST00000555787 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
PSMC1-206ENST00000555787 A6NJR5 290 aa11.81□□□□□ -0.52
PSMC1-206ENST00000555787 MCM6Q14566 821 aa11.81□□□□□ -0.52
PSMC1-206ENST00000555787 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
PSMC1-206ENST00000555787 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
PSMC1-206ENST00000555787 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
PSMC1-206ENST00000555787 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
PSMC1-206ENST00000555787 PSEN1P49768 467 aa11.78□□□□□ -0.52
PSMC1-206ENST00000555787 FECHP22830 423 aa11.76□□□□□ -0.53
PSMC1-206ENST00000555787 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
PSMC1-206ENST00000555787 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
PSMC1-206ENST00000555787 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
PSMC1-206ENST00000555787 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
PSMC1-206ENST00000555787 MFSD10Q14728 455 aa11.75□□□□□ -0.53
PSMC1-206ENST00000555787 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
PSMC1-206ENST00000555787 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
PSMC1-206ENST00000555787 NESP48681 1621 aa11.74□□□□□ -0.53
PSMC1-206ENST00000555787 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
PSMC1-206ENST00000555787 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
PSMC1-206ENST00000555787 DPYSL4O14531 572 aa11.73□□□□□ -0.53
PSMC1-206ENST00000555787 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
PSMC1-206ENST00000555787 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
PSMC1-206ENST00000555787 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
PSMC1-206ENST00000555787 CUX2O14529 1486 aa11.72□□□□□ -0.53
PSMC1-206ENST00000555787 MS4A1P11836 297 aa11.72□□□□□ -0.53
PSMC1-206ENST00000555787 PDE4AP27815 886 aa11.7□□□□□ -0.54
PSMC1-206ENST00000555787 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
PSMC1-206ENST00000555787 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
PSMC1-206ENST00000555787 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
PSMC1-206ENST00000555787 CFTRP13569 1480 aa11.69□□□□□ -0.54
PSMC1-206ENST00000555787 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
PSMC1-206ENST00000555787 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
PSMC1-206ENST00000555787 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
PSMC1-206ENST00000555787 NLRP6P59044 892 aa11.67□□□□□ -0.54
PSMC1-206ENST00000555787 IRF6O14896 467 aa11.66□□□□□ -0.54
PSMC1-206ENST00000555787 AMHR2Q16671 573 aa11.66□□□□□ -0.54
PSMC1-206ENST00000555787 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
PSMC1-206ENST00000555787 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
PSMC1-206ENST00000555787 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
PSMC1-206ENST00000555787 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
PSMC1-206ENST00000555787 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
PSMC1-206ENST00000555787 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
PSMC1-206ENST00000555787 SERPINA10Q9UK55 444 aa11.63□□□□□ -0.55
PSMC1-206ENST00000555787 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
PSMC1-206ENST00000555787 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
PSMC1-206ENST00000555787 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
PSMC1-206ENST00000555787 MINK1Q8N4C8 1332 aaPredicted RBP11.61□□□□□ -0.55
PSMC1-206ENST00000555787 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
PSMC1-206ENST00000555787 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
PSMC1-206ENST00000555787 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
PSMC1-206ENST00000555787 FANCD2Q9BXW9 1451 aa11.6□□□□□ -0.55
PSMC1-206ENST00000555787 PRDM2Q13029 1718 aa11.6□□□□□ -0.55
PSMC1-206ENST00000555787 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
PSMC1-206ENST00000555787 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
PSMC1-206ENST00000555787 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
PSMC1-206ENST00000555787 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
PSMC1-206ENST00000555787 WDR62O43379 1518 aa11.58□□□□□ -0.56
PSMC1-206ENST00000555787 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
PSMC1-206ENST00000555787 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms