RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 SLAIN1Q8ND83 568 aa6.36□□□□□ -1.39
SEC23A-208ENST00000555017 CFAP44Q96MT7 982 aa6.36□□□□□ -1.39
SEC23A-208ENST00000555017 BOLA1Q9Y3E2 137 aa6.36□□□□□ -1.39
SEC23A-208ENST00000555017 MICALL2Q8IY33 904 aa6.35□□□□□ -1.39
SEC23A-208ENST00000555017 CADPS2Q86UW7 1296 aa6.33□□□□□ -1.4
SEC23A-208ENST00000555017 L3MBTL3Q96JM7 780 aaPredicted RBP6.32□□□□□ -1.4
SEC23A-208ENST00000555017 SPRYD3Q8NCJ5 442 aa6.31□□□□□ -1.4
SEC23A-208ENST00000555017 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
SEC23A-208ENST00000555017 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
SEC23A-208ENST00000555017 MARVELD3Q96A59 401 aa6.3□□□□□ -1.4
SEC23A-208ENST00000555017 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.3□□□□□ -1.4
SEC23A-208ENST00000555017 TSHZ2Q9NRE2 1034 aa6.29□□□□□ -1.4
SEC23A-208ENST00000555017 SNPHO15079 494 aa6.28□□□□□ -1.4
SEC23A-208ENST00000555017 C3orf67Q6ZVT6 689 aa6.27□□□□□ -1.41
SEC23A-208ENST00000555017 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.27□□□□□ -1.41
SEC23A-208ENST00000555017 C2orf72A6NCS6 295 aa6.26□□□□□ -1.41
SEC23A-208ENST00000555017 G3V3G9 751 aa6.26□□□□□ -1.41
SEC23A-208ENST00000555017 NCKAP5LQ9HCH0 1330 aa6.25□□□□□ -1.41
SEC23A-208ENST00000555017 PLCB2Q00722 1185 aa6.25□□□□□ -1.41
SEC23A-208ENST00000555017 KIF3CO14782 793 aa6.24□□□□□ -1.41
SEC23A-208ENST00000555017 ABCC9O60706 1549 aa6.24□□□□□ -1.41
SEC23A-208ENST00000555017 RNF166Q96A37 237 aaPredicted RBP6.22□□□□□ -1.41
SEC23A-208ENST00000555017 HOXB3P14651 431 aaPredicted RBP6.21□□□□□ -1.42
SEC23A-208ENST00000555017 CRISPLD2Q9H0B8 497 aa6.21□□□□□ -1.42
SEC23A-208ENST00000555017 RYDENQ9NUL5 291 aaKnown RBP6.21□□□□□ -1.42
SEC23A-208ENST00000555017 DSG2Q14126 1118 aa6.2□□□□□ -1.42
SEC23A-208ENST00000555017 LARP6Q9BRS8 491 aaKnown RBP6.2□□□□□ -1.42
SEC23A-208ENST00000555017 POTEB3A0JP26 581 aa6.19□□□□□ -1.42
SEC23A-208ENST00000555017 HAP1P54257 671 aaPredicted RBP6.19□□□□□ -1.42
SEC23A-208ENST00000555017 EMP3P54852 163 aa6.19□□□□□ -1.42
SEC23A-208ENST00000555017 POTEBQ6S5H4 581 aa6.19□□□□□ -1.42
SEC23A-208ENST00000555017 HS3ST6Q96QI5 342 aa6.19□□□□□ -1.42
SEC23A-208ENST00000555017 GPHNQ9NQX3 736 aaPredicted RBP6.19□□□□□ -1.42
SEC23A-208ENST00000555017 TMC2Q8TDI7 906 aa6.18□□□□□ -1.42
SEC23A-208ENST00000555017 KHSRPQ92945 711 aaKnown RBP eCLIP6.18□□□□□ -1.426e-12■■■■□ 20.1
SEC23A-208ENST00000555017 PLPP6Q8IY26 295 aa6.17□□□□□ -1.42
SEC23A-208ENST00000555017 KDM2AQ9Y2K7 1162 aa6.17□□□□□ -1.42
SEC23A-208ENST00000555017 FAM205CA6NFA0 338 aa6.15□□□□□ -1.42
SEC23A-208ENST00000555017 PDE4AP27815 886 aa6.15□□□□□ -1.42
SEC23A-208ENST00000555017 FOXK1P85037 733 aa6.15□□□□□ -1.42
SEC23A-208ENST00000555017 MFSD10Q14728 455 aa6.14□□□□□ -1.43
SEC23A-208ENST00000555017 PPP1R15BQ5SWA1 713 aa6.14□□□□□ -1.43
SEC23A-208ENST00000555017 ARSIQ5FYB1 569 aa6.13□□□□□ -1.43
SEC23A-208ENST00000555017 UPF1Q92900 1129 aaKnown RBP eCLIP6.13□□□□□ -1.43
SEC23A-208ENST00000555017 DDX27Q96GQ7 796 aaKnown RBP6.13□□□□□ -1.43
SEC23A-208ENST00000555017 EMILIN3Q9NT22 766 aa6.13□□□□□ -1.43
SEC23A-208ENST00000555017 GPR153Q6NV75 609 aa6.11□□□□□ -1.43
SEC23A-208ENST00000555017 ZCCHC6Q5VYS8 1495 aaKnown RBP6.1□□□□□ -1.43
SEC23A-208ENST00000555017 MYT1LQ9UL68 1186 aa6.1□□□□□ -1.43
SEC23A-208ENST00000555017 PCDHGA4Q9Y5G9 962 aa6.09□□□□□ -1.43
SEC23A-208ENST00000555017 NUDT7P0C024 238 aa6.08□□□□□ -1.44
SEC23A-208ENST00000555017 DOK7Q18PE1 504 aa6.08□□□□□ -1.44
SEC23A-208ENST00000555017 CAMK2BQ13554 666 aa6.07□□□□□ -1.44
SEC23A-208ENST00000555017 ZNF710Q8N1W2 664 aa6.07□□□□□ -1.44
SEC23A-208ENST00000555017 OXER1Q8TDS5 423 aa6.07□□□□□ -1.44
SEC23A-208ENST00000555017 KDM4FA0A1W2PPD8 638 aa6.06□□□□□ -1.44
SEC23A-208ENST00000555017 DPYSL4O14531 572 aa6.06□□□□□ -1.44
SEC23A-208ENST00000555017 SLC34A2O95436 690 aa6.06□□□□□ -1.44
SEC23A-208ENST00000555017 HOXB1P14653 301 aaPredicted RBP6.06□□□□□ -1.44
SEC23A-208ENST00000555017 PTCD2Q8WV60 388 aaKnown RBP6.06□□□□□ -1.44
SEC23A-208ENST00000555017 WDR70Q9NW82 654 aa6.05□□□□□ -1.44
SEC23A-208ENST00000555017 E2F4Q16254 413 aa6.04□□□□□ -1.44
SEC23A-208ENST00000555017 KCNV2Q8TDN2 545 aa6.04□□□□□ -1.44
SEC23A-208ENST00000555017 SHROOM4Q9ULL8 1493 aa6.03□□□□□ -1.44
SEC23A-208ENST00000555017 LHX6Q9UPM6 363 aa6.03□□□□□ -1.44
SEC23A-208ENST00000555017 MAP3K9P80192 1104 aa6.02□□□□□ -1.45
SEC23A-208ENST00000555017 EVI5O60447 810 aa6.01□□□□□ -1.45
SEC23A-208ENST00000555017 VSIG10Q8N0Z9 540 aa6.01□□□□□ -1.45
SEC23A-208ENST00000555017 ZSWIM6Q9HCJ5 1215 aa6.01□□□□□ -1.45
SEC23A-208ENST00000555017 RIMBP2O15034 1052 aa6□□□□□ -1.45
SEC23A-208ENST00000555017 VARS2Q5ST30 1063 aaKnown RBP6□□□□□ -1.45
SEC23A-208ENST00000555017 ERBB3P21860 1342 aa5.99□□□□□ -1.45
SEC23A-208ENST00000555017 ZNF316A6NFI3 1004 aaPredicted RBP5.99□□□□□ -1.45
SEC23A-208ENST00000555017 POTEEQ6S8J3 1075 aa5.99□□□□□ -1.45
SEC23A-208ENST00000555017 PTGER2P43116 358 aa5.98□□□□□ -1.45
SEC23A-208ENST00000555017 PRIM1P49642 420 aaKnown RBP5.98□□□□□ -1.45
SEC23A-208ENST00000555017 ANO8Q9HCE9 1232 aaPredicted RBP5.98□□□□□ -1.45
SEC23A-208ENST00000555017 PLA2G2EQ9NZK7 142 aa5.98□□□□□ -1.45
SEC23A-208ENST00000555017 TBC1D12O60347 775 aa5.97□□□□□ -1.45
SEC23A-208ENST00000555017 DDX12PQ92771 950 aa5.97□□□□□ -1.45
SEC23A-208ENST00000555017 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.45
SEC23A-208ENST00000555017 SCRIBQ14160 1630 aa5.96□□□□□ -1.45
SEC23A-208ENST00000555017 SEMA3EO15041 775 aa5.96□□□□□ -1.46
SEC23A-208ENST00000555017 MLLT3P42568 568 aaPredicted RBP5.96□□□□□ -1.46
SEC23A-208ENST00000555017 AXIN2Q9Y2T1 843 aa5.96□□□□□ -1.46
SEC23A-208ENST00000555017 NACADO15069 1562 aa5.95□□□□□ -1.46
SEC23A-208ENST00000555017 SLC24A1O60721 1099 aa5.95□□□□□ -1.46
SEC23A-208ENST00000555017 DCAF1Q9Y4B6 1507 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 RB1CC1Q8TDY2 1594 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 GRXCR2A6NFK2 248 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 PDIA6Q15084 440 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 ZNF454Q8N9F8 522 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 ARHGEF1Q92888 912 aaKnown RBP5.94□□□□□ -1.46
SEC23A-208ENST00000555017 ARIH1Q9Y4X5 557 aaPredicted RBP5.94□□□□□ -1.46
SEC23A-208ENST00000555017 PCDHGA10Q9Y5H3 936 aa5.94□□□□□ -1.46
SEC23A-208ENST00000555017 FOSBP53539 338 aa5.93□□□□□ -1.46
SEC23A-208ENST00000555017 ADAM33Q9BZ11 813 aa5.93□□□□□ -1.46
SEC23A-208ENST00000555017 PSEN2P49810 448 aa5.92□□□□□ -1.46
SEC23A-208ENST00000555017 DMRTA1Q5VZB9 504 aa5.91□□□□□ -1.46
SEC23A-208ENST00000555017 ZNF687Q8N1G0 1237 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms