RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 PREX2Q70Z35 1606 aa29.87■■■□□ 2.37
CLMN-202ENST00000553733 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
CLMN-202ENST00000553733 CLIP1P30622 1438 aa29.86■■■□□ 2.37
CLMN-202ENST00000553733 POGZQ7Z3K3 1410 aa29.85■■■□□ 2.37
CLMN-202ENST00000553733 ZFYVE16Q7Z3T8 1539 aa29.85■■■□□ 2.37
CLMN-202ENST00000553733 CDC42BPAQ5VT25 1732 aa29.84■■■□□ 2.37
CLMN-202ENST00000553733 YEATS2Q9ULM3 1422 aa29.8■■■□□ 2.36
CLMN-202ENST00000553733 ARHGAP5Q13017 1502 aa29.8■■■□□ 2.36
CLMN-202ENST00000553733 SCAPERQ9BY12 1400 aa29.79■■■□□ 2.36
CLMN-202ENST00000553733 RIMS1Q86UR5 1692 aaKnown RBP29.78■■■□□ 2.36
CLMN-202ENST00000553733 CDK11AQ9UQ88 783 aaPredicted RBP29.77■■■□□ 2.36
CLMN-202ENST00000553733 KDM5CP41229 1560 aa29.77■■■□□ 2.36
CLMN-202ENST00000553733 ITSN2Q9NZM3 1697 aa29.76■■■□□ 2.35
CLMN-202ENST00000553733 PTPRMP28827 1452 aa29.75■■■□□ 2.35
CLMN-202ENST00000553733 MAGI2Q86UL8 1455 aa29.75■■■□□ 2.35
CLMN-202ENST00000553733 ABCC1P33527 1531 aa29.72■■■□□ 2.35
CLMN-202ENST00000553733 FER1L4A9Z1Z3 1794 aa29.7■■■□□ 2.35
CLMN-202ENST00000553733 ZNF518AQ6AHZ1 1483 aa29.67■■■□□ 2.34
CLMN-202ENST00000553733 ABCA6Q8N139 1617 aa29.65■■■□□ 2.34
CLMN-202ENST00000553733 EFCAB2Q5VUJ9 269 aa29.65■■■□□ 2.34
CLMN-202ENST00000553733 DIP2CQ9Y2E4 1556 aa29.64■■■□□ 2.34
CLMN-202ENST00000553733 ARHGEF12Q9NZN5 1544 aa29.64■■■□□ 2.34
CLMN-202ENST00000553733 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
CLMN-202ENST00000553733 SAMD9LQ8IVG5 1584 aa29.62■■■□□ 2.33
CLMN-202ENST00000553733 ARID4BQ4LE39 1312 aaPredicted RBP29.62■■■□□ 2.33
CLMN-202ENST00000553733 C9orf84Q5VXU9 1444 aa29.6■■■□□ 2.33
CLMN-202ENST00000553733 ATP10AO60312 1499 aa29.58■■■□□ 2.33
CLMN-202ENST00000553733 KIDINS220Q9ULH0 1771 aa29.57■■■□□ 2.32
CLMN-202ENST00000553733 REREQ9P2R6 1566 aa29.56■■■□□ 2.32
CLMN-202ENST00000553733 TRAPPC8Q9Y2L5 1435 aa29.55■■■□□ 2.32
CLMN-202ENST00000553733 GPATCH8Q9UKJ3 1502 aaKnown RBP29.54■■■□□ 2.32
CLMN-202ENST00000553733 SYCP2Q9BX26 1530 aa29.53■■■□□ 2.32
CLMN-202ENST00000553733 EHBP1L1Q8N3D4 1523 aa29.52■■■□□ 2.32
CLMN-202ENST00000553733 TIAM1Q13009 1591 aa29.52■■■□□ 2.32
CLMN-202ENST00000553733 MLH3Q9UHC1 1453 aa29.51■■■□□ 2.31
CLMN-202ENST00000553733 AFAP1Q8N556 730 aa29.51■■■□□ 2.31
CLMN-202ENST00000553733 LMTK3Q96Q04 1460 aa29.49■■■□□ 2.31
CLMN-202ENST00000553733 INO80Q9ULG1 1556 aaPredicted RBP29.43■■■□□ 2.3
CLMN-202ENST00000553733 MTUS2Q5JR59 1369 aa29.41■■■□□ 2.3
CLMN-202ENST00000553733 MLECQ14165 292 aa29.41■■■□□ 2.3
CLMN-202ENST00000553733 AGLP35573 1532 aa29.4■■■□□ 2.3
CLMN-202ENST00000553733 SUPT6HQ7KZ85 1726 aaKnown RBP29.38■■■□□ 2.29
CLMN-202ENST00000553733 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
CLMN-202ENST00000553733 C3P01024 1663 aa29.36■■■□□ 2.29
CLMN-202ENST00000553733 CCNB3Q8WWL7 1395 aa29.36■■■□□ 2.29
CLMN-202ENST00000553733 ATP7AQ04656 1500 aa29.35■■■□□ 2.29
CLMN-202ENST00000553733 PLXNC1O60486 1568 aa29.33■■■□□ 2.29
CLMN-202ENST00000553733 PLEKHH2Q8IVE3 1493 aa29.32■■■□□ 2.28
CLMN-202ENST00000553733 KIAA1107Q9UPP5 1409 aa29.32■■■□□ 2.28
CLMN-202ENST00000553733 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
CLMN-202ENST00000553733 VPS8Q8N3P4 1428 aa29.3■■■□□ 2.28
CLMN-202ENST00000553733 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
CLMN-202ENST00000553733 PLPPR3Q6T4P5 718 aa29.28■■■□□ 2.28
CLMN-202ENST00000553733 MYT1LQ9UL68 1186 aa29.28■■■□□ 2.28
CLMN-202ENST00000553733 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
CLMN-202ENST00000553733 ADGBQ8N7X0 1667 aa29.28■■■□□ 2.28
CLMN-202ENST00000553733 CFDP1Q9UEE9 299 aaPredicted RBP29.26■■■□□ 2.27
CLMN-202ENST00000553733 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
CLMN-202ENST00000553733 HNRNPMP52272 730 aaKnown RBP eCLIP29.24■■■□□ 2.276e-7■■■■■ 28.4
CLMN-202ENST00000553733 MROH2AA6NES4 1674 aa29.24■■■□□ 2.27
CLMN-202ENST00000553733 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
CLMN-202ENST00000553733 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.27
CLMN-202ENST00000553733 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
CLMN-202ENST00000553733 SPAG9O60271 1321 aaKnown RBP29.19■■■□□ 2.26
CLMN-202ENST00000553733 LRRC9Q6ZRR7 1453 aa29.18■■■□□ 2.26
CLMN-202ENST00000553733 CLTCQ00610 1675 aaKnown RBP29.18■■■□□ 2.26
CLMN-202ENST00000553733 CEBPAP49715 358 aaPredicted RBP29.17■■■□□ 2.26
CLMN-202ENST00000553733 HSPA2P54652 639 aa29.17■■■□□ 2.26
CLMN-202ENST00000553733 A2MP01023 1474 aa29.16■■■□□ 2.26
CLMN-202ENST00000553733 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
CLMN-202ENST00000553733 STRCQ7RTU9 1775 aa29.14■■■□□ 2.26
CLMN-202ENST00000553733 ILDR1Q86SU0 546 aaPredicted RBP29.13■■■□□ 2.25
CLMN-202ENST00000553733 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
CLMN-202ENST00000553733 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
CLMN-202ENST00000553733 CNTLNQ9NXG0 1405 aa29.09■■■□□ 2.25
CLMN-202ENST00000553733 RTEL1-TNFRSF6BF6WH68 1400 aa29.06■■■□□ 2.24
CLMN-202ENST00000553733 UHRF1BP1Q6BDS2 1440 aa29.05■■■□□ 2.24
CLMN-202ENST00000553733 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
CLMN-202ENST00000553733 ZNF142P52746 1687 aaPredicted RBP29.02■■■□□ 2.24
CLMN-202ENST00000553733 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
CLMN-202ENST00000553733 MAST1Q9Y2H9 1570 aa28.99■■■□□ 2.23
CLMN-202ENST00000553733 CROCC2H7BZ55 1655 aa28.97■■■□□ 2.23
CLMN-202ENST00000553733 NPATQ14207 1427 aa28.95■■■□□ 2.23
CLMN-202ENST00000553733 MYOM3Q5VTT5 1437 aa28.95■■■□□ 2.23
CLMN-202ENST00000553733 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
CLMN-202ENST00000553733 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
CLMN-202ENST00000553733 DHX29Q7Z478 1369 aaKnown RBP28.92■■■□□ 2.22
CLMN-202ENST00000553733 PTPRKQ15262 1439 aa28.9■■■□□ 2.22
CLMN-202ENST00000553733 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
CLMN-202ENST00000553733 MIA2Q96PC5 1412 aa28.89■■■□□ 2.22
CLMN-202ENST00000553733 KDM5DQ9BY66 1539 aa28.88■■■□□ 2.21
CLMN-202ENST00000553733 FAM135AQ9P2D6 1515 aa28.88■■■□□ 2.21
CLMN-202ENST00000553733 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
CLMN-202ENST00000553733 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
CLMN-202ENST00000553733 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
CLMN-202ENST00000553733 GGT6Q6P531 493 aa28.86■■■□□ 2.21
CLMN-202ENST00000553733 CAMSAP1Q5T5Y3 1602 aa28.85■■■□□ 2.21
CLMN-202ENST00000553733 NCOA1Q15788 1441 aa28.84■■■□□ 2.21
CLMN-202ENST00000553733 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
CLMN-202ENST00000553733 RSPH4AQ5TD94 716 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms