RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 SNPHO15079 494 aa13.73□□□□□ -0.21
PRKCH-205ENST00000553726 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
PRKCH-205ENST00000553726 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
PRKCH-205ENST00000553726 MICALL2Q8IY33 904 aa13.71□□□□□ -0.21
PRKCH-205ENST00000553726 ST18O60284 1047 aa13.67□□□□□ -0.22
PRKCH-205ENST00000553726 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
PRKCH-205ENST00000553726 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
PRKCH-205ENST00000553726 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
PRKCH-205ENST00000553726 TMEM92Q6UXU6 159 aa13.58□□□□□ -0.24
PRKCH-205ENST00000553726 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
PRKCH-205ENST00000553726 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
PRKCH-205ENST00000553726 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
PRKCH-205ENST00000553726 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-205ENST00000553726 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
PRKCH-205ENST00000553726 PPP1R37O75864 691 aa13.51□□□□□ -0.25
PRKCH-205ENST00000553726 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
PRKCH-205ENST00000553726 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
PRKCH-205ENST00000553726 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
PRKCH-205ENST00000553726 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
PRKCH-205ENST00000553726 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-205ENST00000553726 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
PRKCH-205ENST00000553726 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
PRKCH-205ENST00000553726 CUX2O14529 1486 aa13.45□□□□□ -0.26
PRKCH-205ENST00000553726 ERCC6Q03468 1493 aa13.44□□□□□ -0.26
PRKCH-205ENST00000553726 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
PRKCH-205ENST00000553726 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
PRKCH-205ENST00000553726 KIF3CO14782 793 aa13.42□□□□□ -0.26
PRKCH-205ENST00000553726 EMP3P54852 163 aa13.42□□□□□ -0.26
PRKCH-205ENST00000553726 C2orf72A6NCS6 295 aa13.41□□□□□ -0.26
PRKCH-205ENST00000553726 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
PRKCH-205ENST00000553726 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
PRKCH-205ENST00000553726 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-205ENST00000553726 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
PRKCH-205ENST00000553726 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
PRKCH-205ENST00000553726 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
PRKCH-205ENST00000553726 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
PRKCH-205ENST00000553726 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
PRKCH-205ENST00000553726 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
PRKCH-205ENST00000553726 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
PRKCH-205ENST00000553726 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
PRKCH-205ENST00000553726 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
PRKCH-205ENST00000553726 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
PRKCH-205ENST00000553726 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
PRKCH-205ENST00000553726 NESP48681 1621 aa13.31□□□□□ -0.28
PRKCH-205ENST00000553726 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
PRKCH-205ENST00000553726 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
PRKCH-205ENST00000553726 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
PRKCH-205ENST00000553726 ARSIQ5FYB1 569 aa13.27□□□□□ -0.29
PRKCH-205ENST00000553726 ERBB3P21860 1342 aa13.26□□□□□ -0.29
PRKCH-205ENST00000553726 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-205ENST00000553726 SLC34A2O95436 690 aa13.25□□□□□ -0.29
PRKCH-205ENST00000553726 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
PRKCH-205ENST00000553726 FOXK1P85037 733 aa13.24□□□□□ -0.29
PRKCH-205ENST00000553726 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRKCH-205ENST00000553726 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
PRKCH-205ENST00000553726 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
PRKCH-205ENST00000553726 DSG2Q14126 1118 aa13.19□□□□□ -0.3
PRKCH-205ENST00000553726 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
PRKCH-205ENST00000553726 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-205ENST00000553726 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
PRKCH-205ENST00000553726 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
PRKCH-205ENST00000553726 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
PRKCH-205ENST00000553726 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
PRKCH-205ENST00000553726 WIZO95785 1651 aa13.15□□□□□ -0.3
PRKCH-205ENST00000553726 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
PRKCH-205ENST00000553726 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
PRKCH-205ENST00000553726 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-205ENST00000553726 NUDT7P0C024 238 aa13.14□□□□□ -0.31
PRKCH-205ENST00000553726 PDE4AP27815 886 aa13.14□□□□□ -0.31
PRKCH-205ENST00000553726 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
PRKCH-205ENST00000553726 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
PRKCH-205ENST00000553726 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
PRKCH-205ENST00000553726 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
PRKCH-205ENST00000553726 SPNS2Q8IVW8 549 aa13.09□□□□□ -0.31
PRKCH-205ENST00000553726 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
PRKCH-205ENST00000553726 TBC1D12O60347 775 aa13.07□□□□□ -0.32
PRKCH-205ENST00000553726 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
PRKCH-205ENST00000553726 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
PRKCH-205ENST00000553726 WDR62O43379 1518 aa13.05□□□□□ -0.32
PRKCH-205ENST00000553726 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
PRKCH-205ENST00000553726 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
PRKCH-205ENST00000553726 RSF1Q96T23 1441 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-205ENST00000553726 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
PRKCH-205ENST00000553726 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
PRKCH-205ENST00000553726 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
PRKCH-205ENST00000553726 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
PRKCH-205ENST00000553726 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
PRKCH-205ENST00000553726 CFTRP13569 1480 aa13.02□□□□□ -0.33
PRKCH-205ENST00000553726 MFSD10Q14728 455 aa13.01□□□□□ -0.33
PRKCH-205ENST00000553726 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
PRKCH-205ENST00000553726 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
PRKCH-205ENST00000553726 MMRN1Q13201 1228 aa13□□□□□ -0.33
PRKCH-205ENST00000553726 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
PRKCH-205ENST00000553726 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
PRKCH-205ENST00000553726 PBX2P40425 430 aa12.94□□□□□ -0.34
PRKCH-205ENST00000553726 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
PRKCH-205ENST00000553726 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
PRKCH-205ENST00000553726 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
PRKCH-205ENST00000553726 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRKCH-205ENST00000553726 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms