RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 MARVELD3Q96A59 401 aa10.73□□□□□ -0.69
CUX2-203ENST00000551604 SNPHO15079 494 aa10.7□□□□□ -0.7
CUX2-203ENST00000551604 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
CUX2-203ENST00000551604 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
CUX2-203ENST00000551604 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
CUX2-203ENST00000551604 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
CUX2-203ENST00000551604 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
CUX2-203ENST00000551604 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
CUX2-203ENST00000551604 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
CUX2-203ENST00000551604 ERICH6Q7L0X2 663 aa10.61□□□□□ -0.71
CUX2-203ENST00000551604 EMP3P54852 163 aa10.6□□□□□ -0.71
CUX2-203ENST00000551604 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
CUX2-203ENST00000551604 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
CUX2-203ENST00000551604 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
CUX2-203ENST00000551604 G3V3G9 751 aa10.57□□□□□ -0.72
CUX2-203ENST00000551604 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
CUX2-203ENST00000551604 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
CUX2-203ENST00000551604 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
CUX2-203ENST00000551604 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
CUX2-203ENST00000551604 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
CUX2-203ENST00000551604 EFCAB3Q8N7B9 438 aa10.53□□□□□ -0.72
CUX2-203ENST00000551604 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
CUX2-203ENST00000551604 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
CUX2-203ENST00000551604 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
CUX2-203ENST00000551604 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
CUX2-203ENST00000551604 HOXB3P14651 431 aaPredicted RBP10.48□□□□□ -0.73
CUX2-203ENST00000551604 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
CUX2-203ENST00000551604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
CUX2-203ENST00000551604 ARHGEF1Q92888 912 aaKnown RBP10.47□□□□□ -0.73
CUX2-203ENST00000551604 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
CUX2-203ENST00000551604 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
CUX2-203ENST00000551604 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
CUX2-203ENST00000551604 NLRP6P59044 892 aa10.46□□□□□ -0.73
CUX2-203ENST00000551604 ZNF710Q8N1W2 664 aa10.45□□□□□ -0.74
CUX2-203ENST00000551604 SOX12O15370 315 aa10.44□□□□□ -0.74
CUX2-203ENST00000551604 E2F4Q16254 413 aa10.42□□□□□ -0.74
CUX2-203ENST00000551604 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
CUX2-203ENST00000551604 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
CUX2-203ENST00000551604 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
CUX2-203ENST00000551604 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
CUX2-203ENST00000551604 MICALL2Q8IY33 904 aa10.4□□□□□ -0.74
CUX2-203ENST00000551604 ERBB3P21860 1342 aa10.38□□□□□ -0.75
CUX2-203ENST00000551604 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
CUX2-203ENST00000551604 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
CUX2-203ENST00000551604 SMYD5Q6GMV2 418 aa10.36□□□□□ -0.75
CUX2-203ENST00000551604 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
CUX2-203ENST00000551604 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
CUX2-203ENST00000551604 PPP1R37O75864 691 aa10.33□□□□□ -0.76
CUX2-203ENST00000551604 PDE4AP27815 886 aa10.33□□□□□ -0.76
CUX2-203ENST00000551604 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
CUX2-203ENST00000551604 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
CUX2-203ENST00000551604 ZC3H15Q8WU90 426 aaKnown RBP10.3□□□□□ -0.76
CUX2-203ENST00000551604 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
CUX2-203ENST00000551604 SEMA3EO15041 775 aa10.27□□□□□ -0.77
CUX2-203ENST00000551604 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
CUX2-203ENST00000551604 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
CUX2-203ENST00000551604 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
CUX2-203ENST00000551604 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
CUX2-203ENST00000551604 MFSD10Q14728 455 aa10.24□□□□□ -0.77
CUX2-203ENST00000551604 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
CUX2-203ENST00000551604 ARSIQ5FYB1 569 aa10.24□□□□□ -0.77
CUX2-203ENST00000551604 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
CUX2-203ENST00000551604 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
CUX2-203ENST00000551604 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
CUX2-203ENST00000551604 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
CUX2-203ENST00000551604 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
CUX2-203ENST00000551604 ARXQ96QS3 562 aa10.21□□□□□ -0.77
CUX2-203ENST00000551604 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.77
CUX2-203ENST00000551604 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
CUX2-203ENST00000551604 RNF166Q96A37 237 aaPredicted RBP10.2□□□□□ -0.78
CUX2-203ENST00000551604 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
CUX2-203ENST00000551604 ZMYND10O75800 440 aa10.17□□□□□ -0.78
CUX2-203ENST00000551604 CAMK2BQ13554 666 aa10.16□□□□□ -0.78
CUX2-203ENST00000551604 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.78
CUX2-203ENST00000551604 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CUX2-203ENST00000551604 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CUX2-203ENST00000551604 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
CUX2-203ENST00000551604 BARGINQ6ZT62 677 aa10.12□□□□□ -0.79
CUX2-203ENST00000551604 NUDT7P0C024 238 aa10.11□□□□□ -0.79
CUX2-203ENST00000551604 KIF3CO14782 793 aa10.1□□□□□ -0.79
CUX2-203ENST00000551604 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
CUX2-203ENST00000551604 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
CUX2-203ENST00000551604 AK7Q96M32 723 aa10.09□□□□□ -0.79
CUX2-203ENST00000551604 KRI1Q8N9T8 703 aaKnown RBP10.08□□□□□ -0.8
CUX2-203ENST00000551604 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
CUX2-203ENST00000551604 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
CUX2-203ENST00000551604 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
CUX2-203ENST00000551604 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
CUX2-203ENST00000551604 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
CUX2-203ENST00000551604 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
CUX2-203ENST00000551604 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
CUX2-203ENST00000551604 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
CUX2-203ENST00000551604 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
CUX2-203ENST00000551604 PTGER2P43116 358 aa10.01□□□□□ -0.81
CUX2-203ENST00000551604 POTEEQ6S8J3 1075 aa10.01□□□□□ -0.81
CUX2-203ENST00000551604 MLLT3P42568 568 aaPredicted RBP10□□□□□ -0.81
CUX2-203ENST00000551604 PDIA6Q15084 440 aa10□□□□□ -0.81
CUX2-203ENST00000551604 DPYSL4O14531 572 aa9.99□□□□□ -0.81
CUX2-203ENST00000551604 SLC34A2O95436 690 aa9.97□□□□□ -0.81
CUX2-203ENST00000551604 FOXK1P85037 733 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms