RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 EMP3P54852 163 aa14.55□□□□□ -0.08
AC087888.1-201ENST00000550884 NKX1-1Q15270 411 aaPredicted RBP14.54□□□□□ -0.08
AC087888.1-201ENST00000550884 DOK7Q18PE1 504 aa14.54□□□□□ -0.08
AC087888.1-201ENST00000550884 KIF3CO14782 793 aa14.53□□□□□ -0.08
AC087888.1-201ENST00000550884 HOXB1P14653 301 aaPredicted RBP14.51□□□□□ -0.09
AC087888.1-201ENST00000550884 ZNF710Q8N1W2 664 aa14.51□□□□□ -0.09
AC087888.1-201ENST00000550884 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
AC087888.1-201ENST00000550884 FAM205CA6NFA0 338 aa14.5□□□□□ -0.09
AC087888.1-201ENST00000550884 HS3ST6Q96QI5 342 aa14.48□□□□□ -0.09
AC087888.1-201ENST00000550884 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
AC087888.1-201ENST00000550884 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
AC087888.1-201ENST00000550884 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
AC087888.1-201ENST00000550884 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
AC087888.1-201ENST00000550884 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.11
AC087888.1-201ENST00000550884 ARSIQ5FYB1 569 aa14.38□□□□□ -0.11
AC087888.1-201ENST00000550884 KRTAP3-3Q9BYR6 98 aa14.38□□□□□ -0.11
AC087888.1-201ENST00000550884 KRTAP3-2Q9BYR7 98 aa14.38□□□□□ -0.11
AC087888.1-201ENST00000550884 TMC2Q8TDI7 906 aa14.36□□□□□ -0.11
AC087888.1-201ENST00000550884 ERBB3P21860 1342 aa14.36□□□□□ -0.11
AC087888.1-201ENST00000550884 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
AC087888.1-201ENST00000550884 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
AC087888.1-201ENST00000550884 SPNS2Q8IVW8 549 aa14.31□□□□□ -0.12
AC087888.1-201ENST00000550884 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
AC087888.1-201ENST00000550884 SLC34A2O95436 690 aa14.27□□□□□ -0.13
AC087888.1-201ENST00000550884 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
AC087888.1-201ENST00000550884 FOXK1P85037 733 aa14.25□□□□□ -0.13
AC087888.1-201ENST00000550884 PCDHGA4Q9Y5G9 962 aa14.25□□□□□ -0.13
AC087888.1-201ENST00000550884 NUDT7P0C024 238 aa14.24□□□□□ -0.13
AC087888.1-201ENST00000550884 DSG2Q14126 1118 aa14.24□□□□□ -0.13
AC087888.1-201ENST00000550884 RYDENQ9NUL5 291 aaKnown RBP14.23□□□□□ -0.13
AC087888.1-201ENST00000550884 PLPP6Q8IY26 295 aa14.22□□□□□ -0.13
AC087888.1-201ENST00000550884 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
AC087888.1-201ENST00000550884 MMRN1Q13201 1228 aa14.21□□□□□ -0.13
AC087888.1-201ENST00000550884 ZNF687Q8N1G0 1237 aa14.2□□□□□ -0.14
AC087888.1-201ENST00000550884 CRISPLD2Q9H0B8 497 aa14.18□□□□□ -0.14
AC087888.1-201ENST00000550884 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
AC087888.1-201ENST00000550884 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
AC087888.1-201ENST00000550884 LHX6Q9UPM6 363 aa14.16□□□□□ -0.14
AC087888.1-201ENST00000550884 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
AC087888.1-201ENST00000550884 PTCD2Q8WV60 388 aaKnown RBP14.15□□□□□ -0.14
AC087888.1-201ENST00000550884 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
AC087888.1-201ENST00000550884 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
AC087888.1-201ENST00000550884 PPP1R15BQ5SWA1 713 aa14.07□□□□□ -0.16
AC087888.1-201ENST00000550884 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
AC087888.1-201ENST00000550884 PDE4AP27815 886 aa14.05□□□□□ -0.16
AC087888.1-201ENST00000550884 OXER1Q8TDS5 423 aa14.04□□□□□ -0.16
AC087888.1-201ENST00000550884 UPF1Q92900 1129 aaKnown RBP eCLIP14.03□□□□□ -0.16
AC087888.1-201ENST00000550884 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
AC087888.1-201ENST00000550884 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
AC087888.1-201ENST00000550884 AXIN2Q9Y2T1 843 aa14.01□□□□□ -0.17
AC087888.1-201ENST00000550884 MFSD10Q14728 455 aa13.98□□□□□ -0.17
AC087888.1-201ENST00000550884 TBC1D12O60347 775 aa13.97□□□□□ -0.17
AC087888.1-201ENST00000550884 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.17
AC087888.1-201ENST00000550884 ANKRD13DQ6ZTN6 518 aa13.97□□□□□ -0.17
AC087888.1-201ENST00000550884 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
AC087888.1-201ENST00000550884 PBX2P40425 430 aa13.93□□□□□ -0.18
AC087888.1-201ENST00000550884 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
AC087888.1-201ENST00000550884 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
AC087888.1-201ENST00000550884 PSEN2P49810 448 aa13.88□□□□□ -0.19
AC087888.1-201ENST00000550884 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
AC087888.1-201ENST00000550884 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
AC087888.1-201ENST00000550884 RNF166Q96A37 237 aaPredicted RBP13.87□□□□□ -0.19
AC087888.1-201ENST00000550884 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
AC087888.1-201ENST00000550884 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
AC087888.1-201ENST00000550884 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
AC087888.1-201ENST00000550884 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
AC087888.1-201ENST00000550884 EVI5O60447 810 aa13.84□□□□□ -0.19
AC087888.1-201ENST00000550884 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
AC087888.1-201ENST00000550884 FOSBP53539 338 aa13.8□□□□□ -0.2
AC087888.1-201ENST00000550884 MAP3K9P80192 1104 aa13.8□□□□□ -0.2
AC087888.1-201ENST00000550884 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
AC087888.1-201ENST00000550884 PTGER2P43116 358 aa13.79□□□□□ -0.2
AC087888.1-201ENST00000550884 ADGRD1Q6QNK2 874 aa13.79□□□□□ -0.2
AC087888.1-201ENST00000550884 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
AC087888.1-201ENST00000550884 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
AC087888.1-201ENST00000550884 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
AC087888.1-201ENST00000550884 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
AC087888.1-201ENST00000550884 HRO43593 1189 aa13.74□□□□□ -0.21
AC087888.1-201ENST00000550884 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
AC087888.1-201ENST00000550884 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
AC087888.1-201ENST00000550884 TK2O00142 265 aa13.72□□□□□ -0.21
AC087888.1-201ENST00000550884 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
AC087888.1-201ENST00000550884 DPYSL4O14531 572 aa13.7□□□□□ -0.22
AC087888.1-201ENST00000550884 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
AC087888.1-201ENST00000550884 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
AC087888.1-201ENST00000550884 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
AC087888.1-201ENST00000550884 PTPREP23469 700 aa13.64□□□□□ -0.23
AC087888.1-201ENST00000550884 KCNH8Q96L42 1107 aa13.62□□□□□ -0.23
AC087888.1-201ENST00000550884 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
AC087888.1-201ENST00000550884 PHF14O94880 888 aa13.6□□□□□ -0.23
AC087888.1-201ENST00000550884 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
AC087888.1-201ENST00000550884 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
AC087888.1-201ENST00000550884 COL9A1P20849 921 aa13.57□□□□□ -0.24
AC087888.1-201ENST00000550884 TYW1BQ6NUM6 668 aa13.57□□□□□ -0.24
AC087888.1-201ENST00000550884 E2F4Q16254 413 aa13.55□□□□□ -0.24
AC087888.1-201ENST00000550884 DDX12PQ92771 950 aa13.55□□□□□ -0.24
AC087888.1-201ENST00000550884 PDIA6Q15084 440 aa13.53□□□□□ -0.24
AC087888.1-201ENST00000550884 FBXW7Q969H0 707 aa13.53□□□□□ -0.24
AC087888.1-201ENST00000550884 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
AC087888.1-201ENST00000550884 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms