RNA–Protein interactions for RNA: ENST00000550224.5

PRIM1-205, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,206 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-205ENST00000550224 PKD2Q13563 968 aa11.29□□□□□ -0.6
PRIM1-205ENST00000550224 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
PRIM1-205ENST00000550224 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
PRIM1-205ENST00000550224 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
PRIM1-205ENST00000550224 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
PRIM1-205ENST00000550224 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
PRIM1-205ENST00000550224 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
PRIM1-205ENST00000550224 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
PRIM1-205ENST00000550224 CFTRP13569 1480 aa11.25□□□□□ -0.61
PRIM1-205ENST00000550224 G3V3G9 751 aa11.24□□□□□ -0.61
PRIM1-205ENST00000550224 PSEN1P49768 467 aa11.22□□□□□ -0.61
PRIM1-205ENST00000550224 WRNQ14191 1432 aaPredicted RBP eCLIP11.2□□□□□ -0.62
PRIM1-205ENST00000550224 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
PRIM1-205ENST00000550224 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
PRIM1-205ENST00000550224 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
PRIM1-205ENST00000550224 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
PRIM1-205ENST00000550224 ERBB3P21860 1342 aa11.15□□□□□ -0.62
PRIM1-205ENST00000550224 RGL2O15211 777 aa11.15□□□□□ -0.62
PRIM1-205ENST00000550224 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
PRIM1-205ENST00000550224 EEA1Q15075 1411 aa11.15□□□□□ -0.62
PRIM1-205ENST00000550224 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
PRIM1-205ENST00000550224 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
PRIM1-205ENST00000550224 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
PRIM1-205ENST00000550224 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
PRIM1-205ENST00000550224 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
PRIM1-205ENST00000550224 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
PRIM1-205ENST00000550224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
PRIM1-205ENST00000550224 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
PRIM1-205ENST00000550224 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
PRIM1-205ENST00000550224 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
PRIM1-205ENST00000550224 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
PRIM1-205ENST00000550224 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
PRIM1-205ENST00000550224 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
PRIM1-205ENST00000550224 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
PRIM1-205ENST00000550224 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
PRIM1-205ENST00000550224 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
PRIM1-205ENST00000550224 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
PRIM1-205ENST00000550224 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
PRIM1-205ENST00000550224 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
PRIM1-205ENST00000550224 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
PRIM1-205ENST00000550224 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.64
PRIM1-205ENST00000550224 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
PRIM1-205ENST00000550224 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
PRIM1-205ENST00000550224 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
PRIM1-205ENST00000550224 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
PRIM1-205ENST00000550224 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
PRIM1-205ENST00000550224 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
PRIM1-205ENST00000550224 NESP48681 1621 aa10.98□□□□□ -0.65
PRIM1-205ENST00000550224 CUX1P39880 1505 aa10.98□□□□□ -0.65
PRIM1-205ENST00000550224 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
PRIM1-205ENST00000550224 SOGA1O94964 1423 aa10.96□□□□□ -0.65
PRIM1-205ENST00000550224 STK25O00506 426 aa10.94□□□□□ -0.66
PRIM1-205ENST00000550224 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
PRIM1-205ENST00000550224 STK24Q9Y6E0 443 aa10.93□□□□□ -0.66
PRIM1-205ENST00000550224 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
PRIM1-205ENST00000550224 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
PRIM1-205ENST00000550224 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
PRIM1-205ENST00000550224 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
PRIM1-205ENST00000550224 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
PRIM1-205ENST00000550224 ANKRD13DQ6ZTN6 518 aa10.91□□□□□ -0.66
PRIM1-205ENST00000550224 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
PRIM1-205ENST00000550224 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
PRIM1-205ENST00000550224 MRC2Q9UBG0 1479 aa10.9□□□□□ -0.66
PRIM1-205ENST00000550224 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
PRIM1-205ENST00000550224 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
PRIM1-205ENST00000550224 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
PRIM1-205ENST00000550224 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
PRIM1-205ENST00000550224 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
PRIM1-205ENST00000550224 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
PRIM1-205ENST00000550224 CUX2O14529 1486 aa10.87□□□□□ -0.67
PRIM1-205ENST00000550224 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
PRIM1-205ENST00000550224 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
PRIM1-205ENST00000550224 SOX12O15370 315 aa10.86□□□□□ -0.67
PRIM1-205ENST00000550224 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
PRIM1-205ENST00000550224 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
PRIM1-205ENST00000550224 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
PRIM1-205ENST00000550224 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
PRIM1-205ENST00000550224 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
PRIM1-205ENST00000550224 KIF21BO75037 1637 aa10.84□□□□□ -0.67
PRIM1-205ENST00000550224 PTGER2P43116 358 aa10.83□□□□□ -0.68
PRIM1-205ENST00000550224 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
PRIM1-205ENST00000550224 IGF1RP08069 1367 aa10.82□□□□□ -0.68
PRIM1-205ENST00000550224 CARMIL1Q5VZK9 1371 aa10.82□□□□□ -0.68
PRIM1-205ENST00000550224 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
PRIM1-205ENST00000550224 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
PRIM1-205ENST00000550224 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
PRIM1-205ENST00000550224 ARSIQ5FYB1 569 aa10.81□□□□□ -0.68
PRIM1-205ENST00000550224 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
PRIM1-205ENST00000550224 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
PRIM1-205ENST00000550224 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
PRIM1-205ENST00000550224 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
PRIM1-205ENST00000550224 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
PRIM1-205ENST00000550224 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
PRIM1-205ENST00000550224 RAPGEF2Q9Y4G8 1499 aa10.79□□□□□ -0.68
PRIM1-205ENST00000550224 WDR62O43379 1518 aa10.79□□□□□ -0.68
PRIM1-205ENST00000550224 NLRP6P59044 892 aa10.78□□□□□ -0.68
PRIM1-205ENST00000550224 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
PRIM1-205ENST00000550224 WDR97A6NE52 1622 aa10.77□□□□□ -0.68
PRIM1-205ENST00000550224 TDRD9Q8NDG6 1382 aaKnown RBP10.76□□□□□ -0.69
PRIM1-205ENST00000550224 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms