RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
CALCOCO1-217ENST00000549935 FOXD1Q16676 465 aa17.56■□□□□ 0.4
CALCOCO1-217ENST00000549935 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
CALCOCO1-217ENST00000549935 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
CALCOCO1-217ENST00000549935 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
CALCOCO1-217ENST00000549935 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
CALCOCO1-217ENST00000549935 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
CALCOCO1-217ENST00000549935 L3MBTL2Q969R5 705 aa17.53■□□□□ 0.4
CALCOCO1-217ENST00000549935 DAPK1P53355 1430 aa17.52■□□□□ 0.39
CALCOCO1-217ENST00000549935 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
CALCOCO1-217ENST00000549935 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
CALCOCO1-217ENST00000549935 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
CALCOCO1-217ENST00000549935 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
CALCOCO1-217ENST00000549935 DISP1Q96F81 1524 aa17.49■□□□□ 0.39
CALCOCO1-217ENST00000549935 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
CALCOCO1-217ENST00000549935 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
CALCOCO1-217ENST00000549935 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-217ENST00000549935 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
CALCOCO1-217ENST00000549935 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-217ENST00000549935 ABCC5O15440 1437 aa17.47■□□□□ 0.39
CALCOCO1-217ENST00000549935 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
CALCOCO1-217ENST00000549935 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
CALCOCO1-217ENST00000549935 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
CALCOCO1-217ENST00000549935 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
CALCOCO1-217ENST00000549935 RPRD2Q5VT52 1461 aaKnown RBP17.44■□□□□ 0.38
CALCOCO1-217ENST00000549935 C11orf95C9JLR9 678 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO1-217ENST00000549935 POLR1AO95602 1720 aaPredicted RBP17.43■□□□□ 0.38
CALCOCO1-217ENST00000549935 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
CALCOCO1-217ENST00000549935 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
CALCOCO1-217ENST00000549935 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
CALCOCO1-217ENST00000549935 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
CALCOCO1-217ENST00000549935 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
CALCOCO1-217ENST00000549935 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
CALCOCO1-217ENST00000549935 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-217ENST00000549935 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
CALCOCO1-217ENST00000549935 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.38
CALCOCO1-217ENST00000549935 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-217ENST00000549935 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.37
CALCOCO1-217ENST00000549935 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
CALCOCO1-217ENST00000549935 CAMSAP2Q08AD1 1489 aa17.36■□□□□ 0.37
CALCOCO1-217ENST00000549935 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-217ENST00000549935 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-217ENST00000549935 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-217ENST00000549935 DEKP35659 375 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-217ENST00000549935 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
CALCOCO1-217ENST00000549935 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
CALCOCO1-217ENST00000549935 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
CALCOCO1-217ENST00000549935 PZPP20742 1482 aa17.34■□□□□ 0.37
CALCOCO1-217ENST00000549935 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
CALCOCO1-217ENST00000549935 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
CALCOCO1-217ENST00000549935 KIF14Q15058 1648 aa17.31■□□□□ 0.36
CALCOCO1-217ENST00000549935 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CALCOCO1-217ENST00000549935 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
CALCOCO1-217ENST00000549935 ADGBQ8N7X0 1667 aa17.31■□□□□ 0.36
CALCOCO1-217ENST00000549935 FBLN2P98095 1184 aa17.3■□□□□ 0.36
CALCOCO1-217ENST00000549935 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
CALCOCO1-217ENST00000549935 DHX29Q7Z478 1369 aaKnown RBP17.29■□□□□ 0.36
CALCOCO1-217ENST00000549935 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-217ENST00000549935 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO1-217ENST00000549935 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
CALCOCO1-217ENST00000549935 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.36
CALCOCO1-217ENST00000549935 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.35
CALCOCO1-217ENST00000549935 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.35
CALCOCO1-217ENST00000549935 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
CALCOCO1-217ENST00000549935 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
CALCOCO1-217ENST00000549935 PKD2Q13563 968 aa17.26■□□□□ 0.35
CALCOCO1-217ENST00000549935 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
CALCOCO1-217ENST00000549935 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
CALCOCO1-217ENST00000549935 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
CALCOCO1-217ENST00000549935 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
CALCOCO1-217ENST00000549935 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
CALCOCO1-217ENST00000549935 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
CALCOCO1-217ENST00000549935 ANP32AP39687 249 aaKnown RBP17.23■□□□□ 0.35
CALCOCO1-217ENST00000549935 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
CALCOCO1-217ENST00000549935 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
CALCOCO1-217ENST00000549935 USP47Q96K76 1375 aa17.23■□□□□ 0.35
CALCOCO1-217ENST00000549935 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
CALCOCO1-217ENST00000549935 JPH4Q96JJ6 628 aa17.22■□□□□ 0.35
CALCOCO1-217ENST00000549935 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
CALCOCO1-217ENST00000549935 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
CALCOCO1-217ENST00000549935 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-217ENST00000549935 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
CALCOCO1-217ENST00000549935 PLEKHD1A6NEE1 506 aa17.18■□□□□ 0.34
CALCOCO1-217ENST00000549935 NUP160Q12769 1436 aa17.18■□□□□ 0.34
CALCOCO1-217ENST00000549935 PNISRQ8TF01 805 aaKnown RBP17.17■□□□□ 0.34
CALCOCO1-217ENST00000549935 NUP155O75694 1391 aa17.17■□□□□ 0.34
CALCOCO1-217ENST00000549935 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
CALCOCO1-217ENST00000549935 KDM5CP41229 1560 aa17.17■□□□□ 0.34
CALCOCO1-217ENST00000549935 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-217ENST00000549935 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO1-217ENST00000549935 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
CALCOCO1-217ENST00000549935 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
CALCOCO1-217ENST00000549935 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
CALCOCO1-217ENST00000549935 ABCA8O94911 1581 aa17.14■□□□□ 0.33
CALCOCO1-217ENST00000549935 ATP10BO94823 1461 aa17.14■□□□□ 0.33
CALCOCO1-217ENST00000549935 NBR1Q14596 966 aa17.14■□□□□ 0.33
CALCOCO1-217ENST00000549935 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
CALCOCO1-217ENST00000549935 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
CALCOCO1-217ENST00000549935 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
CALCOCO1-217ENST00000549935 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms