RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 NAIPQ13075 1403 aa36.44■■■■□ 3.42
TGFBR1-207ENST00000549766 ABCC5O15440 1437 aa36.42■■■■□ 3.42
TGFBR1-207ENST00000549766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.4■■■■□ 3.425e-7■■■■□ 23.8
TGFBR1-207ENST00000549766 PREX2Q70Z35 1606 aa36.36■■■■□ 3.41
TGFBR1-207ENST00000549766 ROCK1Q13464 1354 aa36.35■■■■□ 3.41
TGFBR1-207ENST00000549766 TTC37Q6PGP7 1564 aa36.35■■■■□ 3.41
TGFBR1-207ENST00000549766 GCC2Q8IWJ2 1684 aa36.33■■■■□ 3.41
TGFBR1-207ENST00000549766 CDC42BPBQ9Y5S2 1711 aa36.32■■■■□ 3.4
TGFBR1-207ENST00000549766 CHIC2Q9UKJ5 165 aa36.29■■■■□ 3.4
TGFBR1-207ENST00000549766 ZNF777Q9ULD5 760 aaPredicted RBP36.28■■■■□ 3.4
TGFBR1-207ENST00000549766 CROCC2H7BZ55 1655 aa36.25■■■■□ 3.39
TGFBR1-207ENST00000549766 WDR7Q9Y4E6 1490 aa36.25■■■■□ 3.39
TGFBR1-207ENST00000549766 MAPKBP1O60336 1514 aa36.24■■■■□ 3.39
TGFBR1-207ENST00000549766 RRP7BPQ9NSQ0 103 aa36.24■■■■□ 3.39
TGFBR1-207ENST00000549766 MYO5CQ9NQX4 1742 aa36.22■■■■□ 3.39
TGFBR1-207ENST00000549766 SAMD9LQ8IVG5 1584 aa36.22■■■■□ 3.39
TGFBR1-207ENST00000549766 KCNH8Q96L42 1107 aa36.22■■■■□ 3.39
TGFBR1-207ENST00000549766 RIMBP3CA6NJZ7 1639 aa36.21■■■■□ 3.39
TGFBR1-207ENST00000549766 RIMBP3BA6NNM3 1639 aa36.21■■■■□ 3.39
TGFBR1-207ENST00000549766 RIMBP3Q9UFD9 1639 aa36.21■■■■□ 3.39
TGFBR1-207ENST00000549766 ADGRL2O95490 1459 aa36.21■■■■□ 3.39
TGFBR1-207ENST00000549766 ARHGEF5Q12774 1597 aa36.2■■■■□ 3.38
TGFBR1-207ENST00000549766 MBD5Q9P267 1494 aa36.19■■■■□ 3.38
TGFBR1-207ENST00000549766 SHANK2Q9UPX8 1470 aa36.18■■■■□ 3.38
TGFBR1-207ENST00000549766 PLCH2O75038 1416 aa36.18■■■■□ 3.38
TGFBR1-207ENST00000549766 ARHGAP5Q13017 1502 aa36.16■■■■□ 3.38
TGFBR1-207ENST00000549766 ADGBQ8N7X0 1667 aa36.16■■■■□ 3.38
TGFBR1-207ENST00000549766 NCOA1Q15788 1441 aa36.14■■■■□ 3.38
TGFBR1-207ENST00000549766 ASXL2Q76L83 1435 aa36.14■■■■□ 3.38
TGFBR1-207ENST00000549766 KDM6BO15054 1643 aa36.13■■■■□ 3.37
TGFBR1-207ENST00000549766 ARAP3Q8WWN8 1544 aa36.11■■■■□ 3.37
TGFBR1-207ENST00000549766 KIAA1107Q9UPP5 1409 aa36.09■■■■□ 3.37
TGFBR1-207ENST00000549766 RSPH4AQ5TD94 716 aa36.08■■■■□ 3.37
TGFBR1-207ENST00000549766 PLEKHH2Q8IVE3 1493 aa36.08■■■■□ 3.37
TGFBR1-207ENST00000549766 ABCA9Q8IUA7 1624 aa36.07■■■■□ 3.36
TGFBR1-207ENST00000549766 ACIN1Q9UKV3 1341 aaKnown RBP36.07■■■■□ 3.36
TGFBR1-207ENST00000549766 CCDC141Q6ZP82 1450 aa36.06■■■■□ 3.36
TGFBR1-207ENST00000549766 NPM1P06748 294 aaKnown RBP eCLIP36.06■■■■□ 3.36
TGFBR1-207ENST00000549766 HNRNPMP52272 730 aaKnown RBP eCLIP36.06■■■■□ 3.369e-7■■□□□ 14.5
TGFBR1-207ENST00000549766 C9orf84Q5VXU9 1444 aa36.06■■■■□ 3.36
TGFBR1-207ENST00000549766 ANKRD30AQ9BXX3 1397 aa36.05■■■■□ 3.36
TGFBR1-207ENST00000549766 SYCP2Q9BX26 1530 aa36.03■■■■□ 3.36
TGFBR1-207ENST00000549766 EFCAB2Q5VUJ9 269 aa36■■■■□ 3.35
TGFBR1-207ENST00000549766 TSPY4P0CV99 314 aa36■■■■□ 3.35
TGFBR1-207ENST00000549766 TSPY10P0CW01 314 aa36■■■■□ 3.35
TGFBR1-207ENST00000549766 MAST1Q9Y2H9 1570 aa35.96■■■■□ 3.35
TGFBR1-207ENST00000549766 ARHGEF12Q9NZN5 1544 aa35.95■■■■□ 3.35
TGFBR1-207ENST00000549766 ABCC1P33527 1531 aa35.94■■■■□ 3.34
TGFBR1-207ENST00000549766 DENND4BO75064 1496 aaPredicted RBP35.91■■■■□ 3.34
TGFBR1-207ENST00000549766 ANKRD50Q9ULJ7 1429 aa35.88■■■■□ 3.33
TGFBR1-207ENST00000549766 TRIM52Q96A61 297 aa35.87■■■■□ 3.33
TGFBR1-207ENST00000549766 CYB5RLQ6IPT4 315 aa35.85■■■■□ 3.33
TGFBR1-207ENST00000549766 KIF15Q9NS87 1388 aa35.84■■■■□ 3.33
TGFBR1-207ENST00000549766 FANCAO15360 1455 aa35.83■■■■□ 3.33
TGFBR1-207ENST00000549766 SIN3AQ96ST3 1273 aa35.81■■■■□ 3.32
TGFBR1-207ENST00000549766 MPHOSPH9Q99550 1183 aa35.81■■■■□ 3.32
TGFBR1-207ENST00000549766 PLXNC1O60486 1568 aa35.8■■■■□ 3.32
TGFBR1-207ENST00000549766 TIMELESSQ9UNS1 1208 aa35.79■■■■□ 3.32
TGFBR1-207ENST00000549766 TRAPPC8Q9Y2L5 1435 aa35.78■■■■□ 3.32
TGFBR1-207ENST00000549766 PZPP20742 1482 aa35.74■■■■□ 3.31
TGFBR1-207ENST00000549766 CD109Q6YHK3 1445 aa35.72■■■■□ 3.31
TGFBR1-207ENST00000549766 NEUROD1Q13562 356 aa35.69■■■■□ 3.3
TGFBR1-207ENST00000549766 KDM5DQ9BY66 1539 aa35.69■■■■□ 3.3
TGFBR1-207ENST00000549766 RTEL1-TNFRSF6BF6WH68 1400 aa35.69■■■■□ 3.3
TGFBR1-207ENST00000549766 ADGRL1O94910 1474 aa35.68■■■■□ 3.3
TGFBR1-207ENST00000549766 CFAP74Q9C0B2 1584 aa35.64■■■■□ 3.3
TGFBR1-207ENST00000549766 SLC4A1APQ9BWU0 796 aaKnown RBP35.64■■■■□ 3.3
TGFBR1-207ENST00000549766 DUOX2Q9NRD8 1548 aa35.64■■■■□ 3.3
TGFBR1-207ENST00000549766 SCAPERQ9BY12 1400 aa35.63■■■■□ 3.29
TGFBR1-207ENST00000549766 ZFYVE16Q7Z3T8 1539 aa35.62■■■■□ 3.29
TGFBR1-207ENST00000549766 ANKRD30BQ9BXX2 1392 aa35.61■■■■□ 3.29
TGFBR1-207ENST00000549766 AFAP1Q8N556 730 aa35.61■■■■□ 3.29
TGFBR1-207ENST00000549766 GLI2P10070 1586 aa35.6■■■■□ 3.29
TGFBR1-207ENST00000549766 SPAG9O60271 1321 aaKnown RBP35.6■■■■□ 3.29
TGFBR1-207ENST00000549766 ERBINQ96RT1 1412 aa35.58■■■■□ 3.29
TGFBR1-207ENST00000549766 INO80Q9ULG1 1556 aaPredicted RBP35.57■■■■□ 3.29
TGFBR1-207ENST00000549766 NUP155O75694 1391 aa35.57■■■■□ 3.28
TGFBR1-207ENST00000549766 ZNF316A6NFI3 1004 aaPredicted RBP35.56■■■■□ 3.28
TGFBR1-207ENST00000549766 MAP3K4Q9Y6R4 1608 aa35.55■■■■□ 3.28
TGFBR1-207ENST00000549766 UNC13BO14795 1591 aa35.55■■■■□ 3.28
TGFBR1-207ENST00000549766 FOXD1Q16676 465 aa35.53■■■■□ 3.28
TGFBR1-207ENST00000549766 TONSLQ96HA7 1378 aa35.52■■■■□ 3.28
TGFBR1-207ENST00000549766 NEO1Q92859 1461 aa35.52■■■■□ 3.28
TGFBR1-207ENST00000549766 ATP7AQ04656 1500 aa35.52■■■■□ 3.28
TGFBR1-207ENST00000549766 PPP1R15AO75807 674 aaPredicted RBP35.5■■■■□ 3.27
TGFBR1-207ENST00000549766 ZNF518AQ6AHZ1 1483 aa35.49■■■■□ 3.27
TGFBR1-207ENST00000549766 MAGI2Q86UL8 1455 aa35.47■■■■□ 3.27
TGFBR1-207ENST00000549766 RPRD2Q5VT52 1461 aaKnown RBP35.46■■■■□ 3.27
TGFBR1-207ENST00000549766 PKD2Q13563 968 aa35.46■■■■□ 3.27
TGFBR1-207ENST00000549766 DIP2BQ9P265 1576 aa35.46■■■■□ 3.27
TGFBR1-207ENST00000549766 POGZQ7Z3K3 1410 aa35.45■■■■□ 3.27
TGFBR1-207ENST00000549766 FAM135AQ9P2D6 1515 aa35.45■■■■□ 3.27
TGFBR1-207ENST00000549766 KDM5CP41229 1560 aa35.44■■■■□ 3.26
TGFBR1-207ENST00000549766 TRHP20396 242 aaPredicted RBP35.44■■■■□ 3.26
TGFBR1-207ENST00000549766 IQGAP3Q86VI3 1631 aa35.39■■■■□ 3.26
TGFBR1-207ENST00000549766 KIDINS220Q9ULH0 1771 aa35.39■■■■□ 3.26
TGFBR1-207ENST00000549766 MLH3Q9UHC1 1453 aa35.36■■■■□ 3.25
TGFBR1-207ENST00000549766 FAM69CQ0P6D2 419 aa35.33■■■■□ 3.25
TGFBR1-207ENST00000549766 DHX29Q7Z478 1369 aaKnown RBP35.33■■■■□ 3.25
TGFBR1-207ENST00000549766 DEPDC5O75140 1603 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms