RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
NPAS3-206ENST00000548645 SMG6Q86US8 1419 aaKnown RBP31.42■■■□□ 2.62
NPAS3-206ENST00000548645 KIF7Q2M1P5 1343 aa31.42■■■□□ 2.62
NPAS3-206ENST00000548645 MIA2Q96PC5 1412 aa31.41■■■□□ 2.62
NPAS3-206ENST00000548645 ABCA5Q8WWZ7 1642 aa31.41■■■□□ 2.62
NPAS3-206ENST00000548645 RPRD2Q5VT52 1461 aaKnown RBP31.4■■■□□ 2.62
NPAS3-206ENST00000548645 PDS5BQ9NTI5 1447 aa31.4■■■□□ 2.62
NPAS3-206ENST00000548645 NBPF8Q3BBV2 869 aa31.39■■■□□ 2.62
NPAS3-206ENST00000548645 POLR1AO95602 1720 aaPredicted RBP31.39■■■□□ 2.62
NPAS3-206ENST00000548645 SPATA31E1Q6ZUB1 1445 aa31.38■■■□□ 2.61
NPAS3-206ENST00000548645 ANKRD30BQ9BXX2 1392 aa31.37■■■□□ 2.61
NPAS3-206ENST00000548645 FOXD1Q16676 465 aa31.37■■■□□ 2.61
NPAS3-206ENST00000548645 TEX14Q8IWB6 1497 aa31.35■■■□□ 2.61
NPAS3-206ENST00000548645 NUDCQ9Y266 331 aa31.33■■■□□ 2.61
NPAS3-206ENST00000548645 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
NPAS3-206ENST00000548645 GAPVD1Q14C86 1478 aa31.32■■■□□ 2.6
NPAS3-206ENST00000548645 RNF123Q5XPI4 1314 aa31.32■■■□□ 2.6
NPAS3-206ENST00000548645 PAK3O75914 559 aaPredicted RBP31.3■■■□□ 2.6
NPAS3-206ENST00000548645 URB2Q14146 1524 aaKnown RBP31.3■■■□□ 2.6
NPAS3-206ENST00000548645 CCDC136Q96JN2 1154 aa31.3■■■□□ 2.6
NPAS3-206ENST00000548645 ANP32AP39687 249 aaKnown RBP31.29■■■□□ 2.6
NPAS3-206ENST00000548645 NBR1Q14596 966 aa31.28■■■□□ 2.6
NPAS3-206ENST00000548645 ROCK1Q13464 1354 aa31.27■■■□□ 2.6
NPAS3-206ENST00000548645 EPRSP07814 1512 aaKnown RBP31.27■■■□□ 2.6
NPAS3-206ENST00000548645 IPO9Q96P70 1041 aaKnown RBP31.25■■■□□ 2.59
NPAS3-206ENST00000548645 DHX29Q7Z478 1369 aaKnown RBP31.22■■■□□ 2.59
NPAS3-206ENST00000548645 SLC4A1APQ9BWU0 796 aaKnown RBP31.19■■■□□ 2.58
NPAS3-206ENST00000548645 DAPK1P53355 1430 aa31.19■■■□□ 2.58
NPAS3-206ENST00000548645 ZBTB47Q9UFB7 747 aaPredicted RBP31.16■■■□□ 2.58
NPAS3-206ENST00000548645 CDK13Q14004 1512 aaKnown RBP31.14■■■□□ 2.58
NPAS3-206ENST00000548645 RTL5Q5HYW3 569 aaPredicted RBP31.13■■■□□ 2.57
NPAS3-206ENST00000548645 ARID4BQ4LE39 1312 aaPredicted RBP31.12■■■□□ 2.57
NPAS3-206ENST00000548645 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
NPAS3-206ENST00000548645 ABCC5O15440 1437 aa31.1■■■□□ 2.57
NPAS3-206ENST00000548645 WDR62O43379 1518 aa31.08■■■□□ 2.57
NPAS3-206ENST00000548645 USP47Q96K76 1375 aa31.07■■■□□ 2.57
NPAS3-206ENST00000548645 PNISRQ8TF01 805 aaKnown RBP31.06■■■□□ 2.56
NPAS3-206ENST00000548645 IQGAP2Q13576 1575 aa31.06■■■□□ 2.56
NPAS3-206ENST00000548645 CNGB1Q14028 1251 aaPredicted RBP31.05■■■□□ 2.56
NPAS3-206ENST00000548645 POLR3GLQ9BT43 218 aa31.05■■■□□ 2.56
NPAS3-206ENST00000548645 MBD5Q9P267 1494 aa31.04■■■□□ 2.56
NPAS3-206ENST00000548645 TMC1Q8TDI8 760 aa31.03■■■□□ 2.56
NPAS3-206ENST00000548645 BCORL1Q5H9F3 1711 aa31.03■■■□□ 2.56
NPAS3-206ENST00000548645 ROCK2O75116 1388 aaKnown RBP31.02■■■□□ 2.56
NPAS3-206ENST00000548645 PZPP20742 1482 aa31■■■□□ 2.55
NPAS3-206ENST00000548645 ARID3CA6NKF2 412 aa30.99■■■□□ 2.55
NPAS3-206ENST00000548645 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
NPAS3-206ENST00000548645 KIF14Q15058 1648 aa30.96■■■□□ 2.55
NPAS3-206ENST00000548645 ZNF644Q9H582 1327 aaPredicted RBP30.95■■■□□ 2.55
NPAS3-206ENST00000548645 KDM5CP41229 1560 aa30.95■■■□□ 2.54
NPAS3-206ENST00000548645 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
NPAS3-206ENST00000548645 KIAA1107Q9UPP5 1409 aa30.94■■■□□ 2.54
NPAS3-206ENST00000548645 ZNF326Q5BKZ1 582 aaKnown RBP30.94■■■□□ 2.54
NPAS3-206ENST00000548645 LRPPRCP42704 1394 aaKnown RBP30.92■■■□□ 2.54
NPAS3-206ENST00000548645 KIF15Q9NS87 1388 aa30.92■■■□□ 2.54
NPAS3-206ENST00000548645 TCERG1O14776 1098 aaKnown RBP30.91■■■□□ 2.54
NPAS3-206ENST00000548645 RRP1P56182 461 aaKnown RBP30.9■■■□□ 2.54
NPAS3-206ENST00000548645 TARBP1Q13395 1621 aaKnown RBP30.89■■■□□ 2.54
NPAS3-206ENST00000548645 BRD4O60885 1362 aaPredicted RBP30.89■■■□□ 2.54
NPAS3-206ENST00000548645 KTN1Q86UP2 1357 aaKnown RBP30.88■■■□□ 2.53
NPAS3-206ENST00000548645 SENP3-EIF4A1A0A087X0R7 540 aa30.87■■■□□ 2.53
NPAS3-206ENST00000548645 PBRM1Q86U86 1689 aa30.84■■■□□ 2.53
NPAS3-206ENST00000548645 MYBBP1AQ9BQG0 1328 aaKnown RBP30.84■■■□□ 2.53
NPAS3-206ENST00000548645 UHRF1BP1Q6BDS2 1440 aa30.84■■■□□ 2.53
NPAS3-206ENST00000548645 RALBP1Q15311 655 aa30.84■■■□□ 2.53
NPAS3-206ENST00000548645 RALGAPBQ86X10 1494 aa30.83■■■□□ 2.53
NPAS3-206ENST00000548645 PKD2Q13563 968 aa30.82■■■□□ 2.52
NPAS3-206ENST00000548645 EXOC6Q8TAG9 804 aa30.82■■■□□ 2.52
NPAS3-206ENST00000548645 NPM2Q86SE8 214 aaKnown RBP30.81■■■□□ 2.52
NPAS3-206ENST00000548645 ADAMTS12P58397 1594 aa30.81■■■□□ 2.52
NPAS3-206ENST00000548645 RCAN3Q9UKA8 241 aa30.8■■■□□ 2.52
NPAS3-206ENST00000548645 ADGBQ8N7X0 1667 aa30.8■■■□□ 2.52
NPAS3-206ENST00000548645 USP35Q9P2H5 1018 aa30.8■■■□□ 2.52
NPAS3-206ENST00000548645 MS4A1P11836 297 aa30.79■■■□□ 2.52
NPAS3-206ENST00000548645 CARD11Q9BXL7 1154 aa30.79■■■□□ 2.52
NPAS3-206ENST00000548645 PDE4AP27815 886 aa30.79■■■□□ 2.52
NPAS3-206ENST00000548645 CAMSAP2Q08AD1 1489 aa30.77■■■□□ 2.52
NPAS3-206ENST00000548645 NUP153P49790 1475 aaKnown RBP30.77■■■□□ 2.52
NPAS3-206ENST00000548645 ADGRL2O95490 1459 aa30.76■■■□□ 2.51
NPAS3-206ENST00000548645 PDE3BQ13370 1112 aa30.76■■■□□ 2.51
NPAS3-206ENST00000548645 BACH2Q9BYV9 841 aa30.75■■■□□ 2.51
NPAS3-206ENST00000548645 CFDP1Q9UEE9 299 aaPredicted RBP30.74■■■□□ 2.51
NPAS3-206ENST00000548645 ARHGEF12Q9NZN5 1544 aa30.72■■■□□ 2.51
NPAS3-206ENST00000548645 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
NPAS3-206ENST00000548645 ANKRD30AQ9BXX3 1397 aa30.71■■■□□ 2.51
NPAS3-206ENST00000548645 NEFMP07197 916 aa30.7■■■□□ 2.51
NPAS3-206ENST00000548645 RAPGEF6Q8TEU7 1601 aa30.7■■■□□ 2.5
NPAS3-206ENST00000548645 KIAA0556O60303 1618 aa30.69■■■□□ 2.5
NPAS3-206ENST00000548645 ITSN2Q9NZM3 1697 aa30.69■■■□□ 2.5
NPAS3-206ENST00000548645 PPM1GO15355 546 aaPredicted RBP30.69■■■□□ 2.5
NPAS3-206ENST00000548645 ST20-MTHFSA0A0A6YYL1 179 aa30.68■■■□□ 2.5
NPAS3-206ENST00000548645 TROQ12816 1431 aaPredicted RBP30.68■■■□□ 2.5
NPAS3-206ENST00000548645 LAS1LQ9Y4W2 734 aaKnown RBP30.67■■■□□ 2.5
NPAS3-206ENST00000548645 NLRP13Q86W25 1043 aa30.66■■■□□ 2.5
NPAS3-206ENST00000548645 DISP1Q96F81 1524 aa30.66■■■□□ 2.5
NPAS3-206ENST00000548645 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
NPAS3-206ENST00000548645 CROCC2H7BZ55 1655 aa30.64■■■□□ 2.5
NPAS3-206ENST00000548645 E9PCH4 1651 aa30.64■■■□□ 2.49
NPAS3-206ENST00000548645 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
NPAS3-206ENST00000548645 PRG4Q92954 1404 aaPredicted RBP30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms