RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ATP1B4Q9UN42 357 aaPredicted RBP27.41■■□□□ 1.98
SSH1-208ENST00000548522 FMN1Q68DA7 1419 aa27.39■■□□□ 1.97
SSH1-208ENST00000548522 MAGI2Q86UL8 1455 aa27.38■■□□□ 1.97
SSH1-208ENST00000548522 KIF14Q15058 1648 aa27.38■■□□□ 1.97
SSH1-208ENST00000548522 FBXO41Q8TF61 875 aa27.37■■□□□ 1.97
SSH1-208ENST00000548522 HSPA2P54652 639 aa27.36■■□□□ 1.97
SSH1-208ENST00000548522 MLECQ14165 292 aa27.36■■□□□ 1.97
SSH1-208ENST00000548522 MYO5CQ9NQX4 1742 aa27.32■■□□□ 1.96
SSH1-208ENST00000548522 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
SSH1-208ENST00000548522 TROQ12816 1431 aaPredicted RBP27.29■■□□□ 1.96
SSH1-208ENST00000548522 FER1L4A9Z1Z3 1794 aa27.29■■□□□ 1.96
SSH1-208ENST00000548522 EFCAB2Q5VUJ9 269 aa27.28■■□□□ 1.96
SSH1-208ENST00000548522 LRRIQ1Q96JM4 1722 aa27.27■■□□□ 1.96
SSH1-208ENST00000548522 ATP10AO60312 1499 aa27.27■■□□□ 1.96
SSH1-208ENST00000548522 C9orf84Q5VXU9 1444 aa27.27■■□□□ 1.96
SSH1-208ENST00000548522 ARHGEF12Q9NZN5 1544 aa27.26■■□□□ 1.96
SSH1-208ENST00000548522 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
SSH1-208ENST00000548522 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
SSH1-208ENST00000548522 ZNF518AQ6AHZ1 1483 aa27.22■■□□□ 1.95
SSH1-208ENST00000548522 KDM5CP41229 1560 aa27.22■■□□□ 1.95
SSH1-208ENST00000548522 CLIP1P30622 1438 aa27.2■■□□□ 1.94
SSH1-208ENST00000548522 AFAP1Q8N556 730 aa27.2■■□□□ 1.94
SSH1-208ENST00000548522 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
SSH1-208ENST00000548522 DIP2CQ9Y2E4 1556 aa27.16■■□□□ 1.94
SSH1-208ENST00000548522 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
SSH1-208ENST00000548522 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
SSH1-208ENST00000548522 CASKIN1Q8WXD9 1431 aa27.11■■□□□ 1.93
SSH1-208ENST00000548522 PREX2Q70Z35 1606 aa27.11■■□□□ 1.93
SSH1-208ENST00000548522 ABCC1P33527 1531 aa27.11■■□□□ 1.93
SSH1-208ENST00000548522 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
SSH1-208ENST00000548522 PREX1Q8TCU6 1659 aa27.09■■□□□ 1.93
SSH1-208ENST00000548522 MYT1LQ9UL68 1186 aa27.08■■□□□ 1.93
SSH1-208ENST00000548522 CCDC18Q5T9S5 1454 aa27.07■■□□□ 1.92
SSH1-208ENST00000548522 MLH3Q9UHC1 1453 aa27.06■■□□□ 1.92
SSH1-208ENST00000548522 REREQ9P2R6 1566 aa27.06■■□□□ 1.92
SSH1-208ENST00000548522 ITSN2Q9NZM3 1697 aa27.04■■□□□ 1.92
SSH1-208ENST00000548522 CERKQ8TCT0 537 aa27.02■■□□□ 1.92
SSH1-208ENST00000548522 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
SSH1-208ENST00000548522 FYCO1Q9BQS8 1478 aa26.99■■□□□ 1.91
SSH1-208ENST00000548522 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
SSH1-208ENST00000548522 AGLP35573 1532 aa26.98■■□□□ 1.91
SSH1-208ENST00000548522 STRCQ7RTU9 1775 aa26.97■■□□□ 1.91
SSH1-208ENST00000548522 KIDINS220Q9ULH0 1771 aa26.97■■□□□ 1.91
SSH1-208ENST00000548522 C3P01024 1663 aa26.96■■□□□ 1.91
SSH1-208ENST00000548522 SAMD9LQ8IVG5 1584 aa26.94■■□□□ 1.9
SSH1-208ENST00000548522 SYCP2Q9BX26 1530 aa26.92■■□□□ 1.9
SSH1-208ENST00000548522 ZNF777Q9ULD5 760 aaPredicted RBP26.91■■□□□ 1.9
SSH1-208ENST00000548522 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
SSH1-208ENST00000548522 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
SSH1-208ENST00000548522 HNRNPMP52272 730 aaKnown RBP eCLIP26.84■■□□□ 1.897e-6■■□□□ 14.2
SSH1-208ENST00000548522 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
SSH1-208ENST00000548522 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
SSH1-208ENST00000548522 DMRT2Q9Y5R5 561 aa26.81■■□□□ 1.88
SSH1-208ENST00000548522 SPAG9O60271 1321 aaKnown RBP26.81■■□□□ 1.88
SSH1-208ENST00000548522 ATP7AQ04656 1500 aa26.8■■□□□ 1.88
SSH1-208ENST00000548522 INO80Q9ULG1 1556 aaPredicted RBP26.79■■□□□ 1.88
SSH1-208ENST00000548522 PTPRTO14522 1441 aa26.78■■□□□ 1.88
SSH1-208ENST00000548522 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
SSH1-208ENST00000548522 PLXNC1O60486 1568 aa26.77■■□□□ 1.88
SSH1-208ENST00000548522 NCOA1Q15788 1441 aa26.77■■□□□ 1.88
SSH1-208ENST00000548522 KIAA1107Q9UPP5 1409 aa26.76■■□□□ 1.87
SSH1-208ENST00000548522 CFDP1Q9UEE9 299 aaPredicted RBP26.76■■□□□ 1.87
SSH1-208ENST00000548522 CCNB3Q8WWL7 1395 aa26.75■■□□□ 1.87
SSH1-208ENST00000548522 MROH2AA6NES4 1674 aa26.74■■□□□ 1.87
SSH1-208ENST00000548522 ZMYM3Q14202 1370 aa26.73■■□□□ 1.87
SSH1-208ENST00000548522 A2MP01023 1474 aa26.73■■□□□ 1.87
SSH1-208ENST00000548522 PLEKHH2Q8IVE3 1493 aa26.73■■□□□ 1.87
SSH1-208ENST00000548522 NPATQ14207 1427 aa26.73■■□□□ 1.87
SSH1-208ENST00000548522 MTUS2Q5JR59 1369 aa26.72■■□□□ 1.87
SSH1-208ENST00000548522 LTBP4Q8N2S1 1624 aa26.72■■□□□ 1.87
SSH1-208ENST00000548522 TIAM1Q13009 1591 aa26.71■■□□□ 1.87
SSH1-208ENST00000548522 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.87
SSH1-208ENST00000548522 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.87
SSH1-208ENST00000548522 CAMSAP1Q5T5Y3 1602 aa26.7■■□□□ 1.86
SSH1-208ENST00000548522 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
SSH1-208ENST00000548522 EHBP1L1Q8N3D4 1523 aa26.65■■□□□ 1.86
SSH1-208ENST00000548522 MBD5Q9P267 1494 aa26.64■■□□□ 1.86
SSH1-208ENST00000548522 PTPRKQ15262 1439 aa26.64■■□□□ 1.85
SSH1-208ENST00000548522 GGT6Q6P531 493 aa26.63■■□□□ 1.85
SSH1-208ENST00000548522 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
SSH1-208ENST00000548522 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
SSH1-208ENST00000548522 CEP170BQ9Y4F5 1589 aaPredicted RBP26.59■■□□□ 1.85
SSH1-208ENST00000548522 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
SSH1-208ENST00000548522 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
SSH1-208ENST00000548522 DISP3Q9P2K9 1392 aa26.58■■□□□ 1.84
SSH1-208ENST00000548522 ZNF335Q9H4Z2 1342 aaPredicted RBP26.56■■□□□ 1.84
SSH1-208ENST00000548522 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
SSH1-208ENST00000548522 PLA2R1Q13018 1463 aa26.54■■□□□ 1.84
SSH1-208ENST00000548522 TCOF1Q13428 1488 aaKnown RBP26.54■■□□□ 1.84
SSH1-208ENST00000548522 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
SSH1-208ENST00000548522 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
SSH1-208ENST00000548522 NCOA2Q15596 1464 aa26.5■■□□□ 1.83
SSH1-208ENST00000548522 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
SSH1-208ENST00000548522 DHX29Q7Z478 1369 aaKnown RBP26.49■■□□□ 1.83
SSH1-208ENST00000548522 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
SSH1-208ENST00000548522 SPATA31D1Q6ZQQ2 1576 aa26.47■■□□□ 1.83
SSH1-208ENST00000548522 PKD2Q13563 968 aa26.46■■□□□ 1.83
SSH1-208ENST00000548522 PPP6R1Q9UPN7 881 aa26.46■■□□□ 1.83
SSH1-208ENST00000548522 A2ML1A8K2U0 1454 aa26.46■■□□□ 1.83
SSH1-208ENST00000548522 DNMT1P26358 1616 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms