RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
AC055716.3-201ENST00000547533 PLCH2O75038 1416 aa15.06■□□□□ 0
AC055716.3-201ENST00000547533 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
AC055716.3-201ENST00000547533 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
AC055716.3-201ENST00000547533 KIF14Q15058 1648 aa15.05■□□□□ -0
AC055716.3-201ENST00000547533 CLIP1P30622 1438 aa15.04■□□□□ -0
AC055716.3-201ENST00000547533 MLECQ14165 292 aa15.03■□□□□ -0
AC055716.3-201ENST00000547533 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
AC055716.3-201ENST00000547533 ATP10AO60312 1499 aa15.01□□□□□ -0.01
AC055716.3-201ENST00000547533 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
AC055716.3-201ENST00000547533 YEATS2Q9ULM3 1422 aa15.01□□□□□ -0.01
AC055716.3-201ENST00000547533 ARHGAP5Q13017 1502 aa15□□□□□ -0.01
AC055716.3-201ENST00000547533 ZNF518AQ6AHZ1 1483 aa15□□□□□ -0.01
AC055716.3-201ENST00000547533 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
AC055716.3-201ENST00000547533 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
AC055716.3-201ENST00000547533 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
AC055716.3-201ENST00000547533 HSPA2P54652 639 aa14.97□□□□□ -0.01
AC055716.3-201ENST00000547533 TROQ12816 1431 aaPredicted RBP14.97□□□□□ -0.01
AC055716.3-201ENST00000547533 ARHGAP35Q9NRY4 1499 aa14.96□□□□□ -0.01
AC055716.3-201ENST00000547533 ESF1Q9H501 851 aaKnown RBP14.96□□□□□ -0.01
AC055716.3-201ENST00000547533 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
AC055716.3-201ENST00000547533 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
AC055716.3-201ENST00000547533 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
AC055716.3-201ENST00000547533 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
AC055716.3-201ENST00000547533 KDM5CP41229 1560 aa14.92□□□□□ -0.02
AC055716.3-201ENST00000547533 CDC42BPBQ9Y5S2 1711 aa14.92□□□□□ -0.02
AC055716.3-201ENST00000547533 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
AC055716.3-201ENST00000547533 REREQ9P2R6 1566 aa14.9□□□□□ -0.02
AC055716.3-201ENST00000547533 LRRIQ1Q96JM4 1722 aa14.9□□□□□ -0.02
AC055716.3-201ENST00000547533 CERKQ8TCT0 537 aa14.9□□□□□ -0.02
AC055716.3-201ENST00000547533 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
AC055716.3-201ENST00000547533 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
AC055716.3-201ENST00000547533 DIP2CQ9Y2E4 1556 aa14.88□□□□□ -0.03
AC055716.3-201ENST00000547533 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
AC055716.3-201ENST00000547533 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
AC055716.3-201ENST00000547533 CASKIN1Q8WXD9 1431 aa14.86□□□□□ -0.03
AC055716.3-201ENST00000547533 ABCA6Q8N139 1617 aa14.86□□□□□ -0.03
AC055716.3-201ENST00000547533 ABCC1P33527 1531 aa14.86□□□□□ -0.03
AC055716.3-201ENST00000547533 CEBPAP49715 358 aaPredicted RBP14.85□□□□□ -0.03
AC055716.3-201ENST00000547533 C3P01024 1663 aa14.84□□□□□ -0.03
AC055716.3-201ENST00000547533 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
AC055716.3-201ENST00000547533 AGLP35573 1532 aa14.84□□□□□ -0.03
AC055716.3-201ENST00000547533 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
AC055716.3-201ENST00000547533 CNTLNQ9NXG0 1405 aa14.83□□□□□ -0.03
AC055716.3-201ENST00000547533 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
AC055716.3-201ENST00000547533 STRCQ7RTU9 1775 aa14.82□□□□□ -0.04
AC055716.3-201ENST00000547533 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
AC055716.3-201ENST00000547533 MROH2AA6NES4 1674 aa14.79□□□□□ -0.04
AC055716.3-201ENST00000547533 ZNF777Q9ULD5 760 aaPredicted RBP14.79□□□□□ -0.04
AC055716.3-201ENST00000547533 TRAPPC8Q9Y2L5 1435 aa14.79□□□□□ -0.04
AC055716.3-201ENST00000547533 PLEKHH2Q8IVE3 1493 aa14.77□□□□□ -0.04
AC055716.3-201ENST00000547533 PTPRTO14522 1441 aa14.77□□□□□ -0.04
AC055716.3-201ENST00000547533 SPAG9O60271 1321 aaKnown RBP14.76□□□□□ -0.05
AC055716.3-201ENST00000547533 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
AC055716.3-201ENST00000547533 SAMD9LQ8IVG5 1584 aa14.76□□□□□ -0.05
AC055716.3-201ENST00000547533 SYCP2Q9BX26 1530 aa14.75□□□□□ -0.05
AC055716.3-201ENST00000547533 NPATQ14207 1427 aa14.74□□□□□ -0.05
AC055716.3-201ENST00000547533 CFDP1Q9UEE9 299 aaPredicted RBP14.73□□□□□ -0.05
AC055716.3-201ENST00000547533 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
AC055716.3-201ENST00000547533 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
AC055716.3-201ENST00000547533 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.05
AC055716.3-201ENST00000547533 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.05
AC055716.3-201ENST00000547533 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.06
AC055716.3-201ENST00000547533 GPATCH8Q9UKJ3 1502 aaKnown RBP14.71□□□□□ -0.06
AC055716.3-201ENST00000547533 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.06
AC055716.3-201ENST00000547533 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.06
AC055716.3-201ENST00000547533 DISP3Q9P2K9 1392 aa14.7□□□□□ -0.06
AC055716.3-201ENST00000547533 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
AC055716.3-201ENST00000547533 INO80Q9ULG1 1556 aaPredicted RBP14.69□□□□□ -0.06
AC055716.3-201ENST00000547533 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
AC055716.3-201ENST00000547533 HNRNPMP52272 730 aaKnown RBP eCLIP14.69□□□□□ -0.06
AC055716.3-201ENST00000547533 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
AC055716.3-201ENST00000547533 A2MP01023 1474 aa14.69□□□□□ -0.06
AC055716.3-201ENST00000547533 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
AC055716.3-201ENST00000547533 ZNF142P52746 1687 aaPredicted RBP14.67□□□□□ -0.06
AC055716.3-201ENST00000547533 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
AC055716.3-201ENST00000547533 PLXNC1O60486 1568 aa14.66□□□□□ -0.06
AC055716.3-201ENST00000547533 PKD2Q13563 968 aa14.65□□□□□ -0.06
AC055716.3-201ENST00000547533 GGT6Q6P531 493 aa14.65□□□□□ -0.06
AC055716.3-201ENST00000547533 EHBP1L1Q8N3D4 1523 aa14.64□□□□□ -0.07
AC055716.3-201ENST00000547533 CEP170BQ9Y4F5 1589 aaPredicted RBP14.64□□□□□ -0.07
AC055716.3-201ENST00000547533 LTBP4Q8N2S1 1624 aa14.63□□□□□ -0.07
AC055716.3-201ENST00000547533 SPATA31D1Q6ZQQ2 1576 aa14.63□□□□□ -0.07
AC055716.3-201ENST00000547533 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
AC055716.3-201ENST00000547533 TIAM1Q13009 1591 aa14.6□□□□□ -0.07
AC055716.3-201ENST00000547533 RTEL1-TNFRSF6BF6WH68 1400 aa14.6□□□□□ -0.07
AC055716.3-201ENST00000547533 NCKAP5LQ9HCH0 1330 aa14.6□□□□□ -0.07
AC055716.3-201ENST00000547533 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
AC055716.3-201ENST00000547533 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
AC055716.3-201ENST00000547533 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.08
AC055716.3-201ENST00000547533 POLR1AO95602 1720 aaPredicted RBP14.58□□□□□ -0.08
AC055716.3-201ENST00000547533 CEP162Q5TB80 1403 aa14.58□□□□□ -0.08
AC055716.3-201ENST00000547533 UBAP1LF5GYI3 381 aa14.57□□□□□ -0.08
AC055716.3-201ENST00000547533 A2ML1A8K2U0 1454 aa14.57□□□□□ -0.08
AC055716.3-201ENST00000547533 SOCS7O14512 581 aa14.56□□□□□ -0.08
AC055716.3-201ENST00000547533 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
AC055716.3-201ENST00000547533 TCOF1Q13428 1488 aaKnown RBP14.56□□□□□ -0.08
AC055716.3-201ENST00000547533 ZNF335Q9H4Z2 1342 aaPredicted RBP14.55□□□□□ -0.08
AC055716.3-201ENST00000547533 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
AC055716.3-201ENST00000547533 MBD5Q9P267 1494 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms