RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
R3HDM2-210ENST00000547019 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
R3HDM2-210ENST00000547019 C3P01024 1663 aa16.89■□□□□ 0.29
R3HDM2-210ENST00000547019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
R3HDM2-210ENST00000547019 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
R3HDM2-210ENST00000547019 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
R3HDM2-210ENST00000547019 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
R3HDM2-210ENST00000547019 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
R3HDM2-210ENST00000547019 PTPRTO14522 1441 aa16.86■□□□□ 0.29
R3HDM2-210ENST00000547019 ATP10AO60312 1499 aa16.86■□□□□ 0.29
R3HDM2-210ENST00000547019 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
R3HDM2-210ENST00000547019 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
R3HDM2-210ENST00000547019 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
R3HDM2-210ENST00000547019 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
R3HDM2-210ENST00000547019 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
R3HDM2-210ENST00000547019 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
R3HDM2-210ENST00000547019 KDM5CP41229 1560 aa16.81■□□□□ 0.28
R3HDM2-210ENST00000547019 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
R3HDM2-210ENST00000547019 PLCH2O75038 1416 aa16.79■□□□□ 0.28
R3HDM2-210ENST00000547019 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
R3HDM2-210ENST00000547019 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
R3HDM2-210ENST00000547019 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
R3HDM2-210ENST00000547019 KIF14Q15058 1648 aa16.76■□□□□ 0.27
R3HDM2-210ENST00000547019 REREQ9P2R6 1566 aa16.76■□□□□ 0.27
R3HDM2-210ENST00000547019 MED1Q15648 1581 aaPredicted RBP16.73■□□□□ 0.27
R3HDM2-210ENST00000547019 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
R3HDM2-210ENST00000547019 RANGAP1P46060 587 aaPredicted RBP16.72■□□□□ 0.27
R3HDM2-210ENST00000547019 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
R3HDM2-210ENST00000547019 CDC42BPBQ9Y5S2 1711 aa16.69■□□□□ 0.26
R3HDM2-210ENST00000547019 TRAPPC8Q9Y2L5 1435 aa16.68■□□□□ 0.26
R3HDM2-210ENST00000547019 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
R3HDM2-210ENST00000547019 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
R3HDM2-210ENST00000547019 AGLP35573 1532 aa16.67■□□□□ 0.26
R3HDM2-210ENST00000547019 ZNF142P52746 1687 aaPredicted RBP16.67■□□□□ 0.26
R3HDM2-210ENST00000547019 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
R3HDM2-210ENST00000547019 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
R3HDM2-210ENST00000547019 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
R3HDM2-210ENST00000547019 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
R3HDM2-210ENST00000547019 MYO3AQ8NEV4 1616 aa16.65■□□□□ 0.26
R3HDM2-210ENST00000547019 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
R3HDM2-210ENST00000547019 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
R3HDM2-210ENST00000547019 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
R3HDM2-210ENST00000547019 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
R3HDM2-210ENST00000547019 ABCC1P33527 1531 aa16.61■□□□□ 0.25
R3HDM2-210ENST00000547019 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
R3HDM2-210ENST00000547019 NCKAP5LQ9HCH0 1330 aa16.61■□□□□ 0.25
R3HDM2-210ENST00000547019 PREX2Q70Z35 1606 aa16.6■□□□□ 0.25
R3HDM2-210ENST00000547019 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
R3HDM2-210ENST00000547019 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
R3HDM2-210ENST00000547019 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
R3HDM2-210ENST00000547019 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
R3HDM2-210ENST00000547019 NPATQ14207 1427 aa16.57■□□□□ 0.24
R3HDM2-210ENST00000547019 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
R3HDM2-210ENST00000547019 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
R3HDM2-210ENST00000547019 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
R3HDM2-210ENST00000547019 HSPA1LP34931 641 aa16.55■□□□□ 0.24
R3HDM2-210ENST00000547019 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
R3HDM2-210ENST00000547019 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
R3HDM2-210ENST00000547019 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
R3HDM2-210ENST00000547019 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
R3HDM2-210ENST00000547019 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
R3HDM2-210ENST00000547019 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
R3HDM2-210ENST00000547019 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
R3HDM2-210ENST00000547019 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
R3HDM2-210ENST00000547019 PTPRKQ15262 1439 aa16.49■□□□□ 0.23
R3HDM2-210ENST00000547019 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
R3HDM2-210ENST00000547019 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
R3HDM2-210ENST00000547019 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
R3HDM2-210ENST00000547019 PIP4K2BP78356 416 aa16.47■□□□□ 0.23
R3HDM2-210ENST00000547019 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 PKD2Q13563 968 aa16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 INO80Q9ULG1 1556 aaPredicted RBP16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 CLIP1P30622 1438 aa16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
R3HDM2-210ENST00000547019 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
R3HDM2-210ENST00000547019 CPS1P31327 1500 aa16.44■□□□□ 0.22
R3HDM2-210ENST00000547019 EEA1Q15075 1411 aa16.44■□□□□ 0.22
R3HDM2-210ENST00000547019 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
R3HDM2-210ENST00000547019 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
R3HDM2-210ENST00000547019 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
R3HDM2-210ENST00000547019 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
R3HDM2-210ENST00000547019 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
R3HDM2-210ENST00000547019 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
R3HDM2-210ENST00000547019 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
R3HDM2-210ENST00000547019 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
R3HDM2-210ENST00000547019 A2MP01023 1474 aa16.35■□□□□ 0.21
R3HDM2-210ENST00000547019 TOM1O60784 492 aa16.35■□□□□ 0.21
R3HDM2-210ENST00000547019 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
R3HDM2-210ENST00000547019 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
R3HDM2-210ENST00000547019 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
R3HDM2-210ENST00000547019 RNF17Q9BXT8 1623 aaKnown RBP16.33■□□□□ 0.2
R3HDM2-210ENST00000547019 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
R3HDM2-210ENST00000547019 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
R3HDM2-210ENST00000547019 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
R3HDM2-210ENST00000547019 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
R3HDM2-210ENST00000547019 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
R3HDM2-210ENST00000547019 GPATCH8Q9UKJ3 1502 aaKnown RBP16.3■□□□□ 0.2
R3HDM2-210ENST00000547019 SPAG9O60271 1321 aaKnown RBP16.3■□□□□ 0.2
R3HDM2-210ENST00000547019 XIRP1Q702N8 1843 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms