RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 KIF14Q15058 1648 aa39.04■■■■□ 3.84
PDCD2-214ENST00000545869 UBTFP17480 764 aaKnown RBP39.03■■■■□ 3.84
PDCD2-214ENST00000545869 FMN1Q68DA7 1419 aa39.03■■■■□ 3.84
PDCD2-214ENST00000545869 MYO5CQ9NQX4 1742 aa39.02■■■■□ 3.84
PDCD2-214ENST00000545869 FBXO41Q8TF61 875 aa39■■■■□ 3.83
PDCD2-214ENST00000545869 LRRIQ1Q96JM4 1722 aa38.99■■■■□ 3.83
PDCD2-214ENST00000545869 ATP1B4Q9UN42 357 aaPredicted RBP38.98■■■■□ 3.83
PDCD2-214ENST00000545869 PLPPR3Q6T4P5 718 aa38.97■■■■□ 3.83
PDCD2-214ENST00000545869 FER1L4A9Z1Z3 1794 aa38.97■■■■□ 3.83
PDCD2-214ENST00000545869 HSPA2P54652 639 aa38.94■■■■□ 3.82
PDCD2-214ENST00000545869 MLECQ14165 292 aa38.93■■■■□ 3.82
PDCD2-214ENST00000545869 TROQ12816 1431 aaPredicted RBP38.89■■■■□ 3.82
PDCD2-214ENST00000545869 ATP10AO60312 1499 aa38.88■■■■□ 3.81
PDCD2-214ENST00000545869 ARHGEF12Q9NZN5 1544 aa38.88■■■■□ 3.81
PDCD2-214ENST00000545869 EFCAB2Q5VUJ9 269 aa38.87■■■■□ 3.81
PDCD2-214ENST00000545869 C9orf84Q5VXU9 1444 aa38.86■■■■□ 3.81
PDCD2-214ENST00000545869 ARHGAP5Q13017 1502 aa38.82■■■■□ 3.8
PDCD2-214ENST00000545869 KDM5CP41229 1560 aa38.82■■■■□ 3.8
PDCD2-214ENST00000545869 CDK11AQ9UQ88 783 aaPredicted RBP38.8■■■■□ 3.8
PDCD2-214ENST00000545869 ZNF518AQ6AHZ1 1483 aa38.79■■■■□ 3.8
PDCD2-214ENST00000545869 CDC42BPBQ9Y5S2 1711 aa38.77■■■■□ 3.8
PDCD2-214ENST00000545869 CLIP1P30622 1438 aa38.74■■■■□ 3.79
PDCD2-214ENST00000545869 AFAP1Q8N556 730 aa38.74■■■■□ 3.79
PDCD2-214ENST00000545869 DIP2CQ9Y2E4 1556 aa38.74■■■■□ 3.79
PDCD2-214ENST00000545869 ABCA6Q8N139 1617 aa38.69■■■■□ 3.78
PDCD2-214ENST00000545869 PREX2Q70Z35 1606 aa38.68■■■■□ 3.78
PDCD2-214ENST00000545869 CEBPAP49715 358 aaPredicted RBP38.68■■■■□ 3.78
PDCD2-214ENST00000545869 PREX1Q8TCU6 1659 aa38.68■■■■□ 3.78
PDCD2-214ENST00000545869 CASKIN1Q8WXD9 1431 aa38.64■■■■□ 3.78
PDCD2-214ENST00000545869 ABCC1P33527 1531 aa38.64■■■■□ 3.78
PDCD2-214ENST00000545869 REREQ9P2R6 1566 aa38.63■■■■□ 3.77
PDCD2-214ENST00000545869 TRAPPC8Q9Y2L5 1435 aa38.63■■■■□ 3.77
PDCD2-214ENST00000545869 ITSN2Q9NZM3 1697 aa38.61■■■■□ 3.77
PDCD2-214ENST00000545869 MLH3Q9UHC1 1453 aa38.6■■■■□ 3.77
PDCD2-214ENST00000545869 CCDC18Q5T9S5 1454 aa38.59■■■■□ 3.77
PDCD2-214ENST00000545869 CDC42BPAQ5VT25 1732 aa38.56■■■■□ 3.76
PDCD2-214ENST00000545869 STRCQ7RTU9 1775 aa38.53■■■■□ 3.76
PDCD2-214ENST00000545869 MYT1LQ9UL68 1186 aa38.52■■■■□ 3.76
PDCD2-214ENST00000545869 KIDINS220Q9ULH0 1771 aa38.51■■■■□ 3.76
PDCD2-214ENST00000545869 C3P01024 1663 aa38.5■■■■□ 3.75
PDCD2-214ENST00000545869 CERKQ8TCT0 537 aa38.5■■■■□ 3.75
PDCD2-214ENST00000545869 AGLP35573 1532 aa38.49■■■■□ 3.75
PDCD2-214ENST00000545869 FYCO1Q9BQS8 1478 aa38.47■■■■□ 3.75
PDCD2-214ENST00000545869 SETD1BQ9UPS6 1966 aaKnown RBP38.45■■■■□ 3.75
PDCD2-214ENST00000545869 UHRF1BP1Q6BDS2 1440 aa38.44■■■■□ 3.74
PDCD2-214ENST00000545869 SAMD9LQ8IVG5 1584 aa38.42■■■■□ 3.74
PDCD2-214ENST00000545869 SYCP2Q9BX26 1530 aa38.36■■■■□ 3.73
PDCD2-214ENST00000545869 GPATCH8Q9UKJ3 1502 aaKnown RBP38.35■■■■□ 3.73
PDCD2-214ENST00000545869 ZNF777Q9ULD5 760 aaPredicted RBP38.29■■■■□ 3.72
PDCD2-214ENST00000545869 HNRNPMP52272 730 aaKnown RBP eCLIP38.23■■■■□ 3.71
PDCD2-214ENST00000545869 CNTLNQ9NXG0 1405 aa38.22■■■■□ 3.71
PDCD2-214ENST00000545869 SUPT6HQ7KZ85 1726 aaKnown RBP38.22■■■■□ 3.71
PDCD2-214ENST00000545869 DMRT2Q9Y5R5 561 aa38.22■■■■□ 3.71
PDCD2-214ENST00000545869 ESF1Q9H501 851 aaKnown RBP38.21■■■■□ 3.71
PDCD2-214ENST00000545869 INO80Q9ULG1 1556 aaPredicted RBP38.21■■■■□ 3.71
PDCD2-214ENST00000545869 ATP7AQ04656 1500 aa38.2■■■■□ 3.71
PDCD2-214ENST00000545869 MROH2AA6NES4 1674 aa38.2■■■■□ 3.71
PDCD2-214ENST00000545869 PTPRTO14522 1441 aa38.2■■■■□ 3.71
PDCD2-214ENST00000545869 SPAG9O60271 1321 aaKnown RBP38.18■■■■□ 3.7
PDCD2-214ENST00000545869 PLXNC1O60486 1568 aa38.18■■■■□ 3.7
PDCD2-214ENST00000545869 NCOA1Q15788 1441 aa38.15■■■■□ 3.7
PDCD2-214ENST00000545869 KIAA1107Q9UPP5 1409 aa38.15■■■■□ 3.7
PDCD2-214ENST00000545869 LTBP4Q8N2S1 1624 aa38.12■■■■□ 3.69
PDCD2-214ENST00000545869 NPATQ14207 1427 aa38.11■■■■□ 3.69
PDCD2-214ENST00000545869 CLTCQ00610 1675 aaKnown RBP38.11■■■■□ 3.69
PDCD2-214ENST00000545869 CCNB3Q8WWL7 1395 aa38.1■■■■□ 3.69
PDCD2-214ENST00000545869 LOC105371045A0A1W2PR82 267 aa38.1■■■■□ 3.69
PDCD2-214ENST00000545869 CFDP1Q9UEE9 299 aaPredicted RBP38.1■■■■□ 3.69
PDCD2-214ENST00000545869 PLEKHH2Q8IVE3 1493 aa38.09■■■■□ 3.69
PDCD2-214ENST00000545869 ZMYM3Q14202 1370 aa38.09■■■■□ 3.69
PDCD2-214ENST00000545869 A2MP01023 1474 aa38.09■■■■□ 3.69
PDCD2-214ENST00000545869 TIAM1Q13009 1591 aa38.07■■■■□ 3.69
PDCD2-214ENST00000545869 CAMSAP1Q5T5Y3 1602 aa38.06■■■■□ 3.68
PDCD2-214ENST00000545869 MTUS2Q5JR59 1369 aa38.06■■■■□ 3.68
PDCD2-214ENST00000545869 ZNF644Q9H582 1327 aaPredicted RBP38.03■■■■□ 3.68
PDCD2-214ENST00000545869 MYO3AQ8NEV4 1616 aa38.01■■■■□ 3.67
PDCD2-214ENST00000545869 ZNF142P52746 1687 aaPredicted RBP37.98■■■■□ 3.67
PDCD2-214ENST00000545869 EHBP1L1Q8N3D4 1523 aa37.98■■■■□ 3.67
PDCD2-214ENST00000545869 MBD5Q9P267 1494 aa37.98■■■■□ 3.67
PDCD2-214ENST00000545869 ADGBQ8N7X0 1667 aa37.98■■■■□ 3.67
PDCD2-214ENST00000545869 PTPRKQ15262 1439 aa37.97■■■■□ 3.67
PDCD2-214ENST00000545869 GGT6Q6P531 493 aa37.92■■■■□ 3.66
PDCD2-214ENST00000545869 NCKAP5LQ9HCH0 1330 aa37.91■■■■□ 3.66
PDCD2-214ENST00000545869 CEP170BQ9Y4F5 1589 aaPredicted RBP37.91■■■■□ 3.66
PDCD2-214ENST00000545869 CEP162Q5TB80 1403 aa37.89■■■■□ 3.66
PDCD2-214ENST00000545869 IQSEC2Q5JU85 1478 aa37.87■■■■□ 3.65
PDCD2-214ENST00000545869 PLA2R1Q13018 1463 aa37.85■■■■□ 3.65
PDCD2-214ENST00000545869 TCOF1Q13428 1488 aaKnown RBP37.84■■■■□ 3.65
PDCD2-214ENST00000545869 DISP3Q9P2K9 1392 aa37.82■■■■□ 3.65
PDCD2-214ENST00000545869 ZNF335Q9H4Z2 1342 aaPredicted RBP37.82■■■■□ 3.64
PDCD2-214ENST00000545869 RTEL1-TNFRSF6BF6WH68 1400 aa37.81■■■■□ 3.64
PDCD2-214ENST00000545869 ILDR2Q71H61 639 aa37.81■■■■□ 3.64
PDCD2-214ENST00000545869 DHX29Q7Z478 1369 aaKnown RBP37.77■■■■□ 3.64
PDCD2-214ENST00000545869 NCOA2Q15596 1464 aa37.77■■■■□ 3.64
PDCD2-214ENST00000545869 CAMSAP2Q08AD1 1489 aa37.76■■■■□ 3.63
PDCD2-214ENST00000545869 PPP6R1Q9UPN7 881 aa37.75■■■■□ 3.63
PDCD2-214ENST00000545869 CCDC141Q6ZP82 1450 aa37.74■■■■□ 3.63
PDCD2-214ENST00000545869 DNMT1P26358 1616 aaKnown RBP37.73■■■■□ 3.63
PDCD2-214ENST00000545869 SPATA31D1Q6ZQQ2 1576 aa37.72■■■■□ 3.63
PDCD2-214ENST00000545869 A2ML1A8K2U0 1454 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms