RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
SNHG1-222ENST00000545308 STK25O00506 426 aa10.22□□□□□ -0.77
SNHG1-222ENST00000545308 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-222ENST00000545308 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
SNHG1-222ENST00000545308 RGL2O15211 777 aa10.19□□□□□ -0.78
SNHG1-222ENST00000545308 SLC24A1O60721 1099 aa10.19□□□□□ -0.78
SNHG1-222ENST00000545308 MFRPQ9BY79 579 aa10.19□□□□□ -0.78
SNHG1-222ENST00000545308 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
SNHG1-222ENST00000545308 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
SNHG1-222ENST00000545308 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
SNHG1-222ENST00000545308 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
SNHG1-222ENST00000545308 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
SNHG1-222ENST00000545308 ERBB3P21860 1342 aa10.13□□□□□ -0.79
SNHG1-222ENST00000545308 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
SNHG1-222ENST00000545308 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
SNHG1-222ENST00000545308 KIF3CO14782 793 aa10.06□□□□□ -0.8
SNHG1-222ENST00000545308 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
SNHG1-222ENST00000545308 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
SNHG1-222ENST00000545308 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
SNHG1-222ENST00000545308 PPP1R37O75864 691 aa10.01□□□□□ -0.81
SNHG1-222ENST00000545308 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.813e-16■■□□□ 12.4
SNHG1-222ENST00000545308 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
SNHG1-222ENST00000545308 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
SNHG1-222ENST00000545308 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-222ENST00000545308 SLC34A2O95436 690 aa9.96□□□□□ -0.82
SNHG1-222ENST00000545308 PCDHGA4Q9Y5G9 962 aa9.93□□□□□ -0.82
SNHG1-222ENST00000545308 NUDT7P0C024 238 aa9.92□□□□□ -0.82
SNHG1-222ENST00000545308 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
SNHG1-222ENST00000545308 DNAJC5Q9H3Z4 198 aa9.89□□□□□ -0.83
SNHG1-222ENST00000545308 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
SNHG1-222ENST00000545308 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-222ENST00000545308 MYT1LQ9UL68 1186 aa9.87□□□□□ -0.83
SNHG1-222ENST00000545308 FOXK1P85037 733 aa9.86□□□□□ -0.83
SNHG1-222ENST00000545308 GPHNQ9NQX3 736 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-222ENST00000545308 PTGER2P43116 358 aa9.85□□□□□ -0.83
SNHG1-222ENST00000545308 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-222ENST00000545308 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
SNHG1-222ENST00000545308 LSM11P83369 360 aaKnown RBP eCLIP9.84□□□□□ -0.83
SNHG1-222ENST00000545308 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
SNHG1-222ENST00000545308 PBX2P40425 430 aa9.83□□□□□ -0.84
SNHG1-222ENST00000545308 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
SNHG1-222ENST00000545308 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
SNHG1-222ENST00000545308 DSG2Q14126 1118 aa9.82□□□□□ -0.84
SNHG1-222ENST00000545308 POTEEQ6S8J3 1075 aa9.81□□□□□ -0.84
SNHG1-222ENST00000545308 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
SNHG1-222ENST00000545308 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-222ENST00000545308 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
SNHG1-222ENST00000545308 TBC1D12O60347 775 aa9.76□□□□□ -0.85
SNHG1-222ENST00000545308 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
SNHG1-222ENST00000545308 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
SNHG1-222ENST00000545308 OXER1Q8TDS5 423 aa9.71□□□□□ -0.86
SNHG1-222ENST00000545308 GTPBP6O43824 516 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-222ENST00000545308 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
SNHG1-222ENST00000545308 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
SNHG1-222ENST00000545308 ADGRD1Q6QNK2 874 aa9.69□□□□□ -0.86
SNHG1-222ENST00000545308 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
SNHG1-222ENST00000545308 PDE4AP27815 886 aa9.68□□□□□ -0.86
SNHG1-222ENST00000545308 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNHG1-222ENST00000545308 TK2O00142 265 aa9.67□□□□□ -0.86
SNHG1-222ENST00000545308 PSEN2P49810 448 aa9.67□□□□□ -0.86
SNHG1-222ENST00000545308 DMRTA1Q5VZB9 504 aa9.67□□□□□ -0.86
SNHG1-222ENST00000545308 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
SNHG1-222ENST00000545308 HRO43593 1189 aa9.63□□□□□ -0.87
SNHG1-222ENST00000545308 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
SNHG1-222ENST00000545308 KCNK17Q96T54 332 aa9.61□□□□□ -0.87
SNHG1-222ENST00000545308 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
SNHG1-222ENST00000545308 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
SNHG1-222ENST00000545308 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
SNHG1-222ENST00000545308 MFSD10Q14728 455 aa9.59□□□□□ -0.87
SNHG1-222ENST00000545308 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-222ENST00000545308 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
SNHG1-222ENST00000545308 FOSBP53539 338 aa9.58□□□□□ -0.88
SNHG1-222ENST00000545308 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
SNHG1-222ENST00000545308 EVI5O60447 810 aa9.56□□□□□ -0.88
SNHG1-222ENST00000545308 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
SNHG1-222ENST00000545308 VPS9D1Q9Y2B5 631 aa9.55□□□□□ -0.88
SNHG1-222ENST00000545308 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
SNHG1-222ENST00000545308 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
SNHG1-222ENST00000545308 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
SNHG1-222ENST00000545308 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
SNHG1-222ENST00000545308 CADPS2Q86UW7 1296 aa9.53□□□□□ -0.88
SNHG1-222ENST00000545308 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
SNHG1-222ENST00000545308 PTPREP23469 700 aa9.52□□□□□ -0.89
SNHG1-222ENST00000545308 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
SNHG1-222ENST00000545308 KCTD12Q96CX2 325 aaKnown RBP9.51□□□□□ -0.89
SNHG1-222ENST00000545308 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
SNHG1-222ENST00000545308 ZBED2Q9BTP6 218 aa9.49□□□□□ -0.89
SNHG1-222ENST00000545308 ADAM33Q9BZ11 813 aa9.49□□□□□ -0.89
SNHG1-222ENST00000545308 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-222ENST00000545308 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
SNHG1-222ENST00000545308 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-222ENST00000545308 PCDHGA10Q9Y5H3 936 aa9.45□□□□□ -0.9
SNHG1-222ENST00000545308 PHF14O94880 888 aa9.42□□□□□ -0.9
SNHG1-222ENST00000545308 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
SNHG1-222ENST00000545308 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
SNHG1-222ENST00000545308 PTPN5P54829 565 aa9.41□□□□□ -0.9
SNHG1-222ENST00000545308 TYW1BQ6NUM6 668 aa9.41□□□□□ -0.9
SNHG1-222ENST00000545308 FBXW7Q969H0 707 aa9.41□□□□□ -0.9
SNHG1-222ENST00000545308 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
SNHG1-222ENST00000545308 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms