RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 TPD52L1Q16890 204 aaPredicted RBP11.48□□□□□ -0.57
TSC1-208ENST00000545250 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
TSC1-208ENST00000545250 POGKQ9P215 609 aa11.48□□□□□ -0.57
TSC1-208ENST00000545250 PHF14O94880 888 aa11.47□□□□□ -0.57
TSC1-208ENST00000545250 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
TSC1-208ENST00000545250 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
TSC1-208ENST00000545250 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.58
TSC1-208ENST00000545250 TAF7LQ5H9L4 462 aa11.46□□□□□ -0.58
TSC1-208ENST00000545250 CREBRFQ8IUR6 639 aa11.46□□□□□ -0.58
TSC1-208ENST00000545250 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
TSC1-208ENST00000545250 ODF2Q5BJF6 829 aa11.44□□□□□ -0.58
TSC1-208ENST00000545250 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
TSC1-208ENST00000545250 PES1O00541 588 aaKnown RBP11.43□□□□□ -0.58
TSC1-208ENST00000545250 AMOTL1Q8IY63 956 aa11.42□□□□□ -0.58
TSC1-208ENST00000545250 WWC1Q8IX03 1113 aa11.42□□□□□ -0.58
TSC1-208ENST00000545250 IPO7O95373 1038 aaKnown RBP11.41□□□□□ -0.58
TSC1-208ENST00000545250 SEPT11Q9NVA2 429 aaKnown RBP11.41□□□□□ -0.58
TSC1-208ENST00000545250 R3HCC1Q9Y3T6 440 aaKnown RBP11.41□□□□□ -0.58
TSC1-208ENST00000545250 CCDC47Q96A33 483 aaKnown RBP11.41□□□□□ -0.58
TSC1-208ENST00000545250 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
TSC1-208ENST00000545250 WWC2Q6AWC2 1192 aa11.4□□□□□ -0.58
TSC1-208ENST00000545250 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
TSC1-208ENST00000545250 NEXNQ0ZGT2 675 aa11.4□□□□□ -0.59
TSC1-208ENST00000545250 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
TSC1-208ENST00000545250 FRAT1Q92837 279 aaPredicted RBP11.39□□□□□ -0.59
TSC1-208ENST00000545250 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
TSC1-208ENST00000545250 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
TSC1-208ENST00000545250 ANKRD20A12PQ8NF67 263 aa11.39□□□□□ -0.59
TSC1-208ENST00000545250 NOL10Q9BSC4 688 aaKnown RBP11.39□□□□□ -0.59
TSC1-208ENST00000545250 PAF1Q8N7H5 531 aa11.39□□□□□ -0.59
TSC1-208ENST00000545250 AK7Q96M32 723 aa11.38□□□□□ -0.59
TSC1-208ENST00000545250 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
TSC1-208ENST00000545250 AKAP17AQ02040 695 aaKnown RBP11.38□□□□□ -0.59
TSC1-208ENST00000545250 MYO6Q9UM54 1294 aa11.38□□□□□ -0.59
TSC1-208ENST00000545250 CT47A1Q5JQC4 288 aaPredicted RBP11.38□□□□□ -0.59
TSC1-208ENST00000545250 TEX35Q5T0J7 233 aa11.38□□□□□ -0.59
TSC1-208ENST00000545250 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
TSC1-208ENST00000545250 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
TSC1-208ENST00000545250 RGS3P49796 1198 aa11.37□□□□□ -0.59
TSC1-208ENST00000545250 RUFY1Q96T51 708 aa11.37□□□□□ -0.59
TSC1-208ENST00000545250 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
TSC1-208ENST00000545250 APPP05067 770 aa11.36□□□□□ -0.59
TSC1-208ENST00000545250 SF3A1Q15459 793 aaKnown RBP11.36□□□□□ -0.59
TSC1-208ENST00000545250 MAP7D2Q96T17 732 aa11.36□□□□□ -0.59
TSC1-208ENST00000545250 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
TSC1-208ENST00000545250 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
TSC1-208ENST00000545250 GOLGA6L3A6NEY3 463 aa11.35□□□□□ -0.59
TSC1-208ENST00000545250 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
TSC1-208ENST00000545250 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
TSC1-208ENST00000545250 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 CHMP3Q9Y3E7 222 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 HOOK1Q9UJC3 728 aaKnown RBP11.34□□□□□ -0.59
TSC1-208ENST00000545250 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
TSC1-208ENST00000545250 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
TSC1-208ENST00000545250 CSB-PGBD3P0DP91 1061 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 IRX6P78412 446 aaPredicted RBP11.34□□□□□ -0.59
TSC1-208ENST00000545250 ACBD3Q9H3P7 528 aa11.34□□□□□ -0.59
TSC1-208ENST00000545250 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
TSC1-208ENST00000545250 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
TSC1-208ENST00000545250 SUPT16HQ9Y5B9 1047 aaKnown RBP11.33□□□□□ -0.6
TSC1-208ENST00000545250 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
TSC1-208ENST00000545250 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
TSC1-208ENST00000545250 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
TSC1-208ENST00000545250 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
TSC1-208ENST00000545250 GOLGA6L19H0YKK7 550 aa11.32□□□□□ -0.6
TSC1-208ENST00000545250 CCAR2Q8N163 923 aaKnown RBP11.32□□□□□ -0.6
TSC1-208ENST00000545250 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
TSC1-208ENST00000545250 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
TSC1-208ENST00000545250 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
TSC1-208ENST00000545250 KANK1Q14678 1352 aa11.3□□□□□ -0.6
TSC1-208ENST00000545250 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
TSC1-208ENST00000545250 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
TSC1-208ENST00000545250 H3BQV1 296 aa11.28□□□□□ -0.6
TSC1-208ENST00000545250 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
TSC1-208ENST00000545250 ARID3AQ99856 593 aa11.28□□□□□ -0.6
TSC1-208ENST00000545250 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
TSC1-208ENST00000545250 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
TSC1-208ENST00000545250 ATP6V1DQ9Y5K8 247 aa11.27□□□□□ -0.61
TSC1-208ENST00000545250 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.61
TSC1-208ENST00000545250 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
TSC1-208ENST00000545250 STK31Q9BXU1 1019 aa11.27□□□□□ -0.61
TSC1-208ENST00000545250 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
TSC1-208ENST00000545250 EPS15P42566 896 aa11.26□□□□□ -0.61
TSC1-208ENST00000545250 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
TSC1-208ENST00000545250 TRIM29Q14134 588 aa11.26□□□□□ -0.61
TSC1-208ENST00000545250 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
TSC1-208ENST00000545250 ZFYVE27Q5T4F4 411 aa11.25□□□□□ -0.61
TSC1-208ENST00000545250 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
TSC1-208ENST00000545250 WASHC2AQ641Q2 1341 aa11.25□□□□□ -0.61
TSC1-208ENST00000545250 FOXD1Q16676 465 aa11.25□□□□□ -0.61
TSC1-208ENST00000545250 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
TSC1-208ENST00000545250 BECN2A8MW95 431 aa11.24□□□□□ -0.61
TSC1-208ENST00000545250 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
TSC1-208ENST00000545250 ZNF771Q7L3S4 317 aaPredicted RBP11.24□□□□□ -0.61
TSC1-208ENST00000545250 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
TSC1-208ENST00000545250 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
TSC1-208ENST00000545250 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
TSC1-208ENST00000545250 HDGFL2Q7Z4V5 671 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms