RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 RRP7BPQ9NSQ0 103 aa23.45■■□□□ 1.35
SPDEF-202ENST00000544425 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.35
SPDEF-202ENST00000544425 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
SPDEF-202ENST00000544425 ZNF316A6NFI3 1004 aaPredicted RBP23.42■■□□□ 1.34
SPDEF-202ENST00000544425 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
SPDEF-202ENST00000544425 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
SPDEF-202ENST00000544425 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
SPDEF-202ENST00000544425 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
SPDEF-202ENST00000544425 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
SPDEF-202ENST00000544425 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
SPDEF-202ENST00000544425 NCOA1Q15788 1441 aa23.33■■□□□ 1.32
SPDEF-202ENST00000544425 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
SPDEF-202ENST00000544425 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
SPDEF-202ENST00000544425 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
SPDEF-202ENST00000544425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.32
SPDEF-202ENST00000544425 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
SPDEF-202ENST00000544425 ANKRD30AQ9BXX3 1397 aa23.28■■□□□ 1.32
SPDEF-202ENST00000544425 KDM6BO15054 1643 aa23.27■■□□□ 1.32
SPDEF-202ENST00000544425 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
SPDEF-202ENST00000544425 MBD5Q9P267 1494 aa23.27■■□□□ 1.31
SPDEF-202ENST00000544425 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
SPDEF-202ENST00000544425 ARHGEF5Q12774 1597 aa23.26■■□□□ 1.31
SPDEF-202ENST00000544425 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
SPDEF-202ENST00000544425 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
SPDEF-202ENST00000544425 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
SPDEF-202ENST00000544425 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
SPDEF-202ENST00000544425 CROCC2H7BZ55 1655 aa23.24■■□□□ 1.31
SPDEF-202ENST00000544425 MPHOSPH9Q99550 1183 aa23.24■■□□□ 1.31
SPDEF-202ENST00000544425 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
SPDEF-202ENST00000544425 CDC42BPBQ9Y5S2 1711 aa23.23■■□□□ 1.31
SPDEF-202ENST00000544425 TTC37Q6PGP7 1564 aa23.22■■□□□ 1.31
SPDEF-202ENST00000544425 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
SPDEF-202ENST00000544425 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
SPDEF-202ENST00000544425 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
SPDEF-202ENST00000544425 PLCH2O75038 1416 aa23.21■■□□□ 1.31
SPDEF-202ENST00000544425 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
SPDEF-202ENST00000544425 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
SPDEF-202ENST00000544425 KIAA1107Q9UPP5 1409 aa23.21■■□□□ 1.31
SPDEF-202ENST00000544425 PLEKHH2Q8IVE3 1493 aa23.19■■□□□ 1.3
SPDEF-202ENST00000544425 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
SPDEF-202ENST00000544425 CCDC141Q6ZP82 1450 aa23.18■■□□□ 1.3
SPDEF-202ENST00000544425 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
SPDEF-202ENST00000544425 EFCAB2Q5VUJ9 269 aa23.15■■□□□ 1.3
SPDEF-202ENST00000544425 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
SPDEF-202ENST00000544425 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
SPDEF-202ENST00000544425 MYO5CQ9NQX4 1742 aa23.14■■□□□ 1.29
SPDEF-202ENST00000544425 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
SPDEF-202ENST00000544425 ARAP3Q8WWN8 1544 aa23.12■■□□□ 1.29
SPDEF-202ENST00000544425 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
SPDEF-202ENST00000544425 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
SPDEF-202ENST00000544425 MAST1Q9Y2H9 1570 aa23.09■■□□□ 1.29
SPDEF-202ENST00000544425 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
SPDEF-202ENST00000544425 NPM1P06748 294 aaKnown RBP eCLIP23.08■■□□□ 1.29
SPDEF-202ENST00000544425 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.28
SPDEF-202ENST00000544425 PZPP20742 1482 aa23.07■■□□□ 1.28
SPDEF-202ENST00000544425 ASXL2Q76L83 1435 aa23.06■■□□□ 1.28
SPDEF-202ENST00000544425 ARHGEF12Q9NZN5 1544 aa23.04■■□□□ 1.28
SPDEF-202ENST00000544425 ABCA9Q8IUA7 1624 aa23.01■■□□□ 1.27
SPDEF-202ENST00000544425 ABCC1P33527 1531 aa23.01■■□□□ 1.27
SPDEF-202ENST00000544425 FOXD1Q16676 465 aa23■■□□□ 1.27
SPDEF-202ENST00000544425 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
SPDEF-202ENST00000544425 NUP155O75694 1391 aa22.99■■□□□ 1.27
SPDEF-202ENST00000544425 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
SPDEF-202ENST00000544425 PLXNC1O60486 1568 aa22.97■■□□□ 1.27
SPDEF-202ENST00000544425 PKD2Q13563 968 aa22.96■■□□□ 1.27
SPDEF-202ENST00000544425 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
SPDEF-202ENST00000544425 RTEL1-TNFRSF6BF6WH68 1400 aa22.94■■□□□ 1.26
SPDEF-202ENST00000544425 FANCAO15360 1455 aa22.94■■□□□ 1.26
SPDEF-202ENST00000544425 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
SPDEF-202ENST00000544425 L3MBTL2Q969R5 705 aa22.91■■□□□ 1.26
SPDEF-202ENST00000544425 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
SPDEF-202ENST00000544425 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
SPDEF-202ENST00000544425 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
SPDEF-202ENST00000544425 ERBINQ96RT1 1412 aa22.89■■□□□ 1.26
SPDEF-202ENST00000544425 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.25
SPDEF-202ENST00000544425 AFAP1Q8N556 730 aa22.88■■□□□ 1.25
SPDEF-202ENST00000544425 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
SPDEF-202ENST00000544425 UNC13BO14795 1591 aa22.84■■□□□ 1.25
SPDEF-202ENST00000544425 ADGRL1O94910 1474 aa22.84■■□□□ 1.25
SPDEF-202ENST00000544425 TEX14Q8IWB6 1497 aa22.84■■□□□ 1.25
SPDEF-202ENST00000544425 FAM135AQ9P2D6 1515 aa22.83■■□□□ 1.25
SPDEF-202ENST00000544425 CD109Q6YHK3 1445 aa22.83■■□□□ 1.24
SPDEF-202ENST00000544425 MIER1Q8N108 512 aa22.82■■□□□ 1.24
SPDEF-202ENST00000544425 ZFYVE16Q7Z3T8 1539 aa22.8■■□□□ 1.24
SPDEF-202ENST00000544425 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
SPDEF-202ENST00000544425 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
SPDEF-202ENST00000544425 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
SPDEF-202ENST00000544425 ATP7AQ04656 1500 aa22.75■■□□□ 1.23
SPDEF-202ENST00000544425 CFAP74Q9C0B2 1584 aa22.75■■□□□ 1.23
SPDEF-202ENST00000544425 INO80Q9ULG1 1556 aaPredicted RBP22.75■■□□□ 1.23
SPDEF-202ENST00000544425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
SPDEF-202ENST00000544425 NBPF8Q3BBV2 869 aa22.73■■□□□ 1.23
SPDEF-202ENST00000544425 ZNF518AQ6AHZ1 1483 aa22.72■■□□□ 1.23
SPDEF-202ENST00000544425 DHX29Q7Z478 1369 aaKnown RBP22.71■■□□□ 1.23
SPDEF-202ENST00000544425 NEO1Q92859 1461 aa22.7■■□□□ 1.22
SPDEF-202ENST00000544425 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
SPDEF-202ENST00000544425 ATP10AO60312 1499 aa22.69■■□□□ 1.22
SPDEF-202ENST00000544425 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
SPDEF-202ENST00000544425 PLA2R1Q13018 1463 aa22.67■■□□□ 1.22
SPDEF-202ENST00000544425 POGZQ7Z3K3 1410 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms