RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
SCFD1-207ENST00000544052 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
SCFD1-207ENST00000544052 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
SCFD1-207ENST00000544052 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
SCFD1-207ENST00000544052 P3H3Q8IVL6 736 aa8.05□□□□□ -1.12
SCFD1-207ENST00000544052 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
SCFD1-207ENST00000544052 L3MBTL3Q96JM7 780 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-207ENST00000544052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.03□□□□□ -1.122e-8■■■□□ 14.9
SCFD1-207ENST00000544052 ST18O60284 1047 aa8.02□□□□□ -1.12
SCFD1-207ENST00000544052 NLRP6P59044 892 aa8.02□□□□□ -1.12
SCFD1-207ENST00000544052 SNPHO15079 494 aa8.02□□□□□ -1.13
SCFD1-207ENST00000544052 SOX12O15370 315 aa8.02□□□□□ -1.13
SCFD1-207ENST00000544052 C3orf67Q6ZVT6 689 aa8.01□□□□□ -1.13
SCFD1-207ENST00000544052 MS4A4AQ96JQ5 239 aa7.99□□□□□ -1.13
SCFD1-207ENST00000544052 ILDR1Q86SU0 546 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-207ENST00000544052 CDAN1Q8IWY9 1227 aa7.98□□□□□ -1.13
SCFD1-207ENST00000544052 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-207ENST00000544052 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.14
SCFD1-207ENST00000544052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCFD1-207ENST00000544052 E2F4Q16254 413 aa7.94□□□□□ -1.14
SCFD1-207ENST00000544052 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
SCFD1-207ENST00000544052 G3V3G9 751 aa7.93□□□□□ -1.14
SCFD1-207ENST00000544052 DPY19L2Q6NUT2 758 aa7.93□□□□□ -1.14
SCFD1-207ENST00000544052 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
SCFD1-207ENST00000544052 ARHGEF1Q92888 912 aaKnown RBP7.92□□□□□ -1.14
SCFD1-207ENST00000544052 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
SCFD1-207ENST00000544052 SEMA3EO15041 775 aa7.91□□□□□ -1.14
SCFD1-207ENST00000544052 PDE4AP27815 886 aa7.88□□□□□ -1.15
SCFD1-207ENST00000544052 CRISPLD2Q9H0B8 497 aa7.88□□□□□ -1.15
SCFD1-207ENST00000544052 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
SCFD1-207ENST00000544052 DDX27Q96GQ7 796 aaKnown RBP7.87□□□□□ -1.15
SCFD1-207ENST00000544052 MFSD10Q14728 455 aa7.86□□□□□ -1.15
SCFD1-207ENST00000544052 EMP3P54852 163 aa7.85□□□□□ -1.15
SCFD1-207ENST00000544052 TESPA1A2RU30 521 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-207ENST00000544052 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-207ENST00000544052 ZC3H15Q8WU90 426 aaKnown RBP7.82□□□□□ -1.16
SCFD1-207ENST00000544052 CAMK2BQ13554 666 aa7.81□□□□□ -1.16
SCFD1-207ENST00000544052 HOXB3P14651 431 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-207ENST00000544052 DOK7Q18PE1 504 aa7.79□□□□□ -1.16
SCFD1-207ENST00000544052 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
SCFD1-207ENST00000544052 ZNF710Q8N1W2 664 aa7.79□□□□□ -1.16
SCFD1-207ENST00000544052 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
SCFD1-207ENST00000544052 GPHNQ9NQX3 736 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-207ENST00000544052 FAM205CA6NFA0 338 aa7.78□□□□□ -1.16
SCFD1-207ENST00000544052 PPP1R15BQ5SWA1 713 aa7.78□□□□□ -1.16
SCFD1-207ENST00000544052 ARIH1Q9Y4X5 557 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-207ENST00000544052 SPNS2Q8IVW8 549 aa7.77□□□□□ -1.17
SCFD1-207ENST00000544052 SLC24A3Q9HC58 644 aa7.77□□□□□ -1.17
SCFD1-207ENST00000544052 RIMBP2O15034 1052 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-207ENST00000544052 MLLT3P42568 568 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-207ENST00000544052 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 GTF3C3Q9Y5Q9 886 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 BRPF1P55201 1214 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-207ENST00000544052 DSG2Q14126 1118 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
SCFD1-207ENST00000544052 SMYD5Q6GMV2 418 aa7.74□□□□□ -1.17
SCFD1-207ENST00000544052 DPYSL4O14531 572 aa7.73□□□□□ -1.17
SCFD1-207ENST00000544052 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
SCFD1-207ENST00000544052 TMEM92Q6UXU6 159 aa7.73□□□□□ -1.17
SCFD1-207ENST00000544052 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
SCFD1-207ENST00000544052 ZMYND10O75800 440 aa7.72□□□□□ -1.17
SCFD1-207ENST00000544052 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
SCFD1-207ENST00000544052 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
SCFD1-207ENST00000544052 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.17
SCFD1-207ENST00000544052 ERBB3P21860 1342 aa7.7□□□□□ -1.18
SCFD1-207ENST00000544052 TMC2Q8TDI7 906 aa7.7□□□□□ -1.18
SCFD1-207ENST00000544052 FOXK1P85037 733 aa7.69□□□□□ -1.18
SCFD1-207ENST00000544052 NEUROD2Q15784 382 aa7.69□□□□□ -1.18
SCFD1-207ENST00000544052 C2orf72A6NCS6 295 aa7.68□□□□□ -1.18
SCFD1-207ENST00000544052 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
SCFD1-207ENST00000544052 PDIA6Q15084 440 aa7.67□□□□□ -1.18
SCFD1-207ENST00000544052 BARGINQ6ZT62 677 aa7.66□□□□□ -1.18
SCFD1-207ENST00000544052 KIF3CO14782 793 aa7.66□□□□□ -1.18
SCFD1-207ENST00000544052 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
SCFD1-207ENST00000544052 VARS2Q5ST30 1063 aaKnown RBP7.65□□□□□ -1.18
SCFD1-207ENST00000544052 GPR153Q6NV75 609 aa7.64□□□□□ -1.19
SCFD1-207ENST00000544052 SPDYE16A6NNV3 312 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-207ENST00000544052 KRI1Q8N9T8 703 aaKnown RBP7.61□□□□□ -1.19
SCFD1-207ENST00000544052 UPF1Q92900 1129 aaKnown RBP eCLIP7.61□□□□□ -1.19
SCFD1-207ENST00000544052 GRXCR2A6NFK2 248 aa7.61□□□□□ -1.19
SCFD1-207ENST00000544052 MAP3K9P80192 1104 aa7.61□□□□□ -1.19
SCFD1-207ENST00000544052 ARSIQ5FYB1 569 aa7.61□□□□□ -1.19
SCFD1-207ENST00000544052 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
SCFD1-207ENST00000544052 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-207ENST00000544052 AK7Q96M32 723 aa7.59□□□□□ -1.19
SCFD1-207ENST00000544052 GPR37O15354 613 aa7.58□□□□□ -1.2
SCFD1-207ENST00000544052 ZNF316A6NFI3 1004 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-207ENST00000544052 KHSRPQ92945 711 aaKnown RBP eCLIP7.56□□□□□ -1.21e-7■■■□□ 15
SCFD1-207ENST00000544052 TRIM66O15016 1216 aa7.55□□□□□ -1.2
SCFD1-207ENST00000544052 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
SCFD1-207ENST00000544052 DDX12PQ92771 950 aa7.55□□□□□ -1.2
SCFD1-207ENST00000544052 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
SCFD1-207ENST00000544052 OSBPP22059 807 aa7.55□□□□□ -1.2
SCFD1-207ENST00000544052 RNF166Q96A37 237 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-207ENST00000544052 SLC34A2O95436 690 aa7.53□□□□□ -1.2
SCFD1-207ENST00000544052 PDE4DQ08499 809 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms