RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
MRPL48-212ENST00000543374 TMEM92Q6UXU6 159 aa14.11□□□□□ -0.15
MRPL48-212ENST00000543374 HS3ST6Q96QI5 342 aa14.1□□□□□ -0.15
MRPL48-212ENST00000543374 ERBB3P21860 1342 aa14.04□□□□□ -0.16
MRPL48-212ENST00000543374 HS6ST3Q8IZP7 471 aa14.01□□□□□ -0.17
MRPL48-212ENST00000543374 SPNS2Q8IVW8 549 aa14□□□□□ -0.17
MRPL48-212ENST00000543374 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
MRPL48-212ENST00000543374 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
MRPL48-212ENST00000543374 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
MRPL48-212ENST00000543374 KIF3CO14782 793 aa13.95□□□□□ -0.18
MRPL48-212ENST00000543374 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
MRPL48-212ENST00000543374 C2orf72A6NCS6 295 aa13.94□□□□□ -0.18
MRPL48-212ENST00000543374 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
MRPL48-212ENST00000543374 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
MRPL48-212ENST00000543374 KRTAP3-3Q9BYR6 98 aa13.92□□□□□ -0.18
MRPL48-212ENST00000543374 KRTAP3-2Q9BYR7 98 aa13.92□□□□□ -0.18
MRPL48-212ENST00000543374 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
MRPL48-212ENST00000543374 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
MRPL48-212ENST00000543374 ARSIQ5FYB1 569 aa13.9□□□□□ -0.18
MRPL48-212ENST00000543374 PPP1R37O75864 691 aa13.88□□□□□ -0.19
MRPL48-212ENST00000543374 SLC34A2O95436 690 aa13.88□□□□□ -0.19
MRPL48-212ENST00000543374 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
MRPL48-212ENST00000543374 ZNF687Q8N1G0 1237 aa13.87□□□□□ -0.19
MRPL48-212ENST00000543374 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-212ENST00000543374 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
MRPL48-212ENST00000543374 PCDHGA4Q9Y5G9 962 aa13.77□□□□□ -0.21
MRPL48-212ENST00000543374 FOXK1P85037 733 aa13.76□□□□□ -0.21
MRPL48-212ENST00000543374 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
MRPL48-212ENST00000543374 NUDT7P0C024 238 aa13.73□□□□□ -0.21
MRPL48-212ENST00000543374 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
MRPL48-212ENST00000543374 PTGER2P43116 358 aa13.71□□□□□ -0.21
MRPL48-212ENST00000543374 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
MRPL48-212ENST00000543374 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
MRPL48-212ENST00000543374 TBC1D12O60347 775 aa13.7□□□□□ -0.22
MRPL48-212ENST00000543374 PBX2P40425 430 aa13.69□□□□□ -0.22
MRPL48-212ENST00000543374 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
MRPL48-212ENST00000543374 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
MRPL48-212ENST00000543374 DSG2Q14126 1118 aa13.64□□□□□ -0.23
MRPL48-212ENST00000543374 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
MRPL48-212ENST00000543374 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
MRPL48-212ENST00000543374 MYT1LQ9UL68 1186 aa13.62□□□□□ -0.23
MRPL48-212ENST00000543374 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
MRPL48-212ENST00000543374 RNF166Q96A37 237 aaPredicted RBP13.61□□□□□ -0.23
MRPL48-212ENST00000543374 PDE4AP27815 886 aa13.6□□□□□ -0.23
MRPL48-212ENST00000543374 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
MRPL48-212ENST00000543374 CRISPLD2Q9H0B8 497 aa13.58□□□□□ -0.24
MRPL48-212ENST00000543374 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
MRPL48-212ENST00000543374 ARHGAP33O14559 1287 aa13.54□□□□□ -0.24
MRPL48-212ENST00000543374 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
MRPL48-212ENST00000543374 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.25
MRPL48-212ENST00000543374 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
MRPL48-212ENST00000543374 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
MRPL48-212ENST00000543374 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
MRPL48-212ENST00000543374 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
MRPL48-212ENST00000543374 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
MRPL48-212ENST00000543374 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
MRPL48-212ENST00000543374 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
MRPL48-212ENST00000543374 TK2O00142 265 aa13.44□□□□□ -0.26
MRPL48-212ENST00000543374 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
MRPL48-212ENST00000543374 ADGRD1Q6QNK2 874 aa13.42□□□□□ -0.26
MRPL48-212ENST00000543374 MFSD10Q14728 455 aa13.39□□□□□ -0.27
MRPL48-212ENST00000543374 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
MRPL48-212ENST00000543374 MAP3K9P80192 1104 aa13.36□□□□□ -0.27
MRPL48-212ENST00000543374 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
MRPL48-212ENST00000543374 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
MRPL48-212ENST00000543374 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
MRPL48-212ENST00000543374 PSEN2P49810 448 aa13.35□□□□□ -0.27
MRPL48-212ENST00000543374 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
MRPL48-212ENST00000543374 EVI5O60447 810 aa13.33□□□□□ -0.28
MRPL48-212ENST00000543374 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
MRPL48-212ENST00000543374 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
MRPL48-212ENST00000543374 FOSBP53539 338 aa13.32□□□□□ -0.28
MRPL48-212ENST00000543374 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
MRPL48-212ENST00000543374 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
MRPL48-212ENST00000543374 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
MRPL48-212ENST00000543374 HRO43593 1189 aa13.3□□□□□ -0.28
MRPL48-212ENST00000543374 PTPREP23469 700 aa13.29□□□□□ -0.28
MRPL48-212ENST00000543374 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
MRPL48-212ENST00000543374 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
MRPL48-212ENST00000543374 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
MRPL48-212ENST00000543374 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
MRPL48-212ENST00000543374 VPS9D1Q9Y2B5 631 aa13.24□□□□□ -0.29
MRPL48-212ENST00000543374 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
MRPL48-212ENST00000543374 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
MRPL48-212ENST00000543374 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
MRPL48-212ENST00000543374 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
MRPL48-212ENST00000543374 PHF14O94880 888 aa13.16□□□□□ -0.3
MRPL48-212ENST00000543374 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
MRPL48-212ENST00000543374 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
MRPL48-212ENST00000543374 KCTD12Q96CX2 325 aaKnown RBP13.15□□□□□ -0.3
MRPL48-212ENST00000543374 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
MRPL48-212ENST00000543374 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
MRPL48-212ENST00000543374 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
MRPL48-212ENST00000543374 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
MRPL48-212ENST00000543374 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
MRPL48-212ENST00000543374 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
MRPL48-212ENST00000543374 EPAS1Q99814 870 aa13.12□□□□□ -0.31
MRPL48-212ENST00000543374 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
MRPL48-212ENST00000543374 PPP1R3GB7ZBB8 358 aa13.11□□□□□ -0.31
MRPL48-212ENST00000543374 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms