RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
LDHA-218ENST00000540430 TTC37Q6PGP7 1564 aa13.68□□□□□ -0.22
LDHA-218ENST00000540430 DENND4BO75064 1496 aaPredicted RBP13.68□□□□□ -0.22
LDHA-218ENST00000540430 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
LDHA-218ENST00000540430 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
LDHA-218ENST00000540430 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
LDHA-218ENST00000540430 HECW1Q76N89 1606 aa13.66□□□□□ -0.22
LDHA-218ENST00000540430 ARHGEF40Q8TER5 1519 aa13.65□□□□□ -0.22
LDHA-218ENST00000540430 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
LDHA-218ENST00000540430 BCORL1Q5H9F3 1711 aa13.64□□□□□ -0.23
LDHA-218ENST00000540430 PTPRMP28827 1452 aa13.63□□□□□ -0.23
LDHA-218ENST00000540430 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
LDHA-218ENST00000540430 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
LDHA-218ENST00000540430 PLCH2O75038 1416 aa13.63□□□□□ -0.23
LDHA-218ENST00000540430 ATP1B4Q9UN42 357 aaPredicted RBP13.63□□□□□ -0.23
LDHA-218ENST00000540430 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
LDHA-218ENST00000540430 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
LDHA-218ENST00000540430 MAGI2Q86UL8 1455 aa13.6□□□□□ -0.23
LDHA-218ENST00000540430 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
LDHA-218ENST00000540430 ZFYVE16Q7Z3T8 1539 aa13.59□□□□□ -0.23
LDHA-218ENST00000540430 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
LDHA-218ENST00000540430 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.23
LDHA-218ENST00000540430 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
LDHA-218ENST00000540430 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
LDHA-218ENST00000540430 SCAPERQ9BY12 1400 aa13.58□□□□□ -0.24
LDHA-218ENST00000540430 KIF14Q15058 1648 aa13.58□□□□□ -0.24
LDHA-218ENST00000540430 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
LDHA-218ENST00000540430 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
LDHA-218ENST00000540430 CLIP1P30622 1438 aa13.57□□□□□ -0.24
LDHA-218ENST00000540430 YEATS2Q9ULM3 1422 aa13.57□□□□□ -0.24
LDHA-218ENST00000540430 ERICH6Q7L0X2 663 aa13.56□□□□□ -0.24
LDHA-218ENST00000540430 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
LDHA-218ENST00000540430 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
LDHA-218ENST00000540430 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
LDHA-218ENST00000540430 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
LDHA-218ENST00000540430 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
LDHA-218ENST00000540430 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
LDHA-218ENST00000540430 PCF11O94913 1555 aaKnown RBP13.52□□□□□ -0.24
LDHA-218ENST00000540430 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
LDHA-218ENST00000540430 ATP10AO60312 1499 aa13.51□□□□□ -0.25
LDHA-218ENST00000540430 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
LDHA-218ENST00000540430 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
LDHA-218ENST00000540430 KDM5CP41229 1560 aa13.5□□□□□ -0.25
LDHA-218ENST00000540430 FYCO1Q9BQS8 1478 aa13.49□□□□□ -0.25
LDHA-218ENST00000540430 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
LDHA-218ENST00000540430 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
LDHA-218ENST00000540430 PREX2Q70Z35 1606 aa13.48□□□□□ -0.25
LDHA-218ENST00000540430 MLECQ14165 292 aa13.47□□□□□ -0.25
LDHA-218ENST00000540430 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
LDHA-218ENST00000540430 ARHGEF12Q9NZN5 1544 aa13.47□□□□□ -0.25
LDHA-218ENST00000540430 APLP2Q06481 763 aa13.46□□□□□ -0.25
LDHA-218ENST00000540430 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
LDHA-218ENST00000540430 ABCC1P33527 1531 aa13.44□□□□□ -0.26
LDHA-218ENST00000540430 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
LDHA-218ENST00000540430 REREQ9P2R6 1566 aa13.43□□□□□ -0.26
LDHA-218ENST00000540430 DIP2CQ9Y2E4 1556 aa13.43□□□□□ -0.26
LDHA-218ENST00000540430 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
LDHA-218ENST00000540430 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
LDHA-218ENST00000540430 ITSN2Q9NZM3 1697 aa13.42□□□□□ -0.26
LDHA-218ENST00000540430 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
LDHA-218ENST00000540430 ABCA6Q8N139 1617 aa13.41□□□□□ -0.26
LDHA-218ENST00000540430 HSPA2P54652 639 aa13.4□□□□□ -0.26
LDHA-218ENST00000540430 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
LDHA-218ENST00000540430 AGLP35573 1532 aa13.39□□□□□ -0.27
LDHA-218ENST00000540430 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
LDHA-218ENST00000540430 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
LDHA-218ENST00000540430 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
LDHA-218ENST00000540430 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
LDHA-218ENST00000540430 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
LDHA-218ENST00000540430 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
LDHA-218ENST00000540430 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
LDHA-218ENST00000540430 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
LDHA-218ENST00000540430 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
LDHA-218ENST00000540430 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
LDHA-218ENST00000540430 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
LDHA-218ENST00000540430 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
LDHA-218ENST00000540430 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
LDHA-218ENST00000540430 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
LDHA-218ENST00000540430 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
LDHA-218ENST00000540430 UHRF1BP1Q6BDS2 1440 aa13.33□□□□□ -0.28
LDHA-218ENST00000540430 HNRNPMP52272 730 aaKnown RBP eCLIP13.32□□□□□ -0.28
LDHA-218ENST00000540430 C3P01024 1663 aa13.32□□□□□ -0.28
LDHA-218ENST00000540430 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
LDHA-218ENST00000540430 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
LDHA-218ENST00000540430 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
LDHA-218ENST00000540430 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
LDHA-218ENST00000540430 DHX57Q6P158 1386 aaKnown RBP13.29□□□□□ -0.28
LDHA-218ENST00000540430 INO80Q9ULG1 1556 aaPredicted RBP13.29□□□□□ -0.28
LDHA-218ENST00000540430 TIAM1Q13009 1591 aa13.29□□□□□ -0.28
LDHA-218ENST00000540430 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
LDHA-218ENST00000540430 PLXNC1O60486 1568 aa13.27□□□□□ -0.28
LDHA-218ENST00000540430 STRCQ7RTU9 1775 aa13.27□□□□□ -0.28
LDHA-218ENST00000540430 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
LDHA-218ENST00000540430 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
LDHA-218ENST00000540430 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
LDHA-218ENST00000540430 A2MP01023 1474 aa13.26□□□□□ -0.29
LDHA-218ENST00000540430 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
LDHA-218ENST00000540430 NPATQ14207 1427 aa13.25□□□□□ -0.29
LDHA-218ENST00000540430 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
LDHA-218ENST00000540430 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms