RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
PUDP-206ENST00000540122 ARHGEF12Q9NZN5 1544 aa26.7■■□□□ 1.87
PUDP-206ENST00000540122 HECW1Q76N89 1606 aa26.68■■□□□ 1.86
PUDP-206ENST00000540122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.68■■□□□ 1.86
PUDP-206ENST00000540122 PLEKHD1A6NEE1 506 aa26.66■■□□□ 1.86
PUDP-206ENST00000540122 CEBPAP49715 358 aaPredicted RBP26.66■■□□□ 1.86
PUDP-206ENST00000540122 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
PUDP-206ENST00000540122 ATP10AO60312 1499 aa26.61■■□□□ 1.85
PUDP-206ENST00000540122 C9orf84Q5VXU9 1444 aa26.6■■□□□ 1.85
PUDP-206ENST00000540122 PTPRTO14522 1441 aa26.59■■□□□ 1.85
PUDP-206ENST00000540122 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
PUDP-206ENST00000540122 LTBP4Q8N2S1 1624 aa26.56■■□□□ 1.84
PUDP-206ENST00000540122 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
PUDP-206ENST00000540122 PLCH2O75038 1416 aa26.49■■□□□ 1.83
PUDP-206ENST00000540122 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
PUDP-206ENST00000540122 SETD1BQ9UPS6 1966 aaKnown RBP26.44■■□□□ 1.82
PUDP-206ENST00000540122 NCOA1Q15788 1441 aa26.39■■□□□ 1.82
PUDP-206ENST00000540122 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.82
PUDP-206ENST00000540122 C3P01024 1663 aa26.38■■□□□ 1.81
PUDP-206ENST00000540122 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
PUDP-206ENST00000540122 EFCAB2Q5VUJ9 269 aa26.37■■□□□ 1.81
PUDP-206ENST00000540122 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
PUDP-206ENST00000540122 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
PUDP-206ENST00000540122 KDM5CP41229 1560 aa26.34■■□□□ 1.81
PUDP-206ENST00000540122 DIP2CQ9Y2E4 1556 aa26.33■■□□□ 1.81
PUDP-206ENST00000540122 REREQ9P2R6 1566 aa26.33■■□□□ 1.8
PUDP-206ENST00000540122 UBAP1LF5GYI3 381 aa26.32■■□□□ 1.8
PUDP-206ENST00000540122 AFAP1Q8N556 730 aa26.32■■□□□ 1.8
PUDP-206ENST00000540122 MYO5CQ9NQX4 1742 aa26.31■■□□□ 1.8
PUDP-206ENST00000540122 MYT1LQ9UL68 1186 aa26.28■■□□□ 1.8
PUDP-206ENST00000540122 ESF1Q9H501 851 aaKnown RBP26.27■■□□□ 1.8
PUDP-206ENST00000540122 ZNF335Q9H4Z2 1342 aaPredicted RBP26.27■■□□□ 1.8
PUDP-206ENST00000540122 CAMSAP1Q5T5Y3 1602 aa26.26■■□□□ 1.79
PUDP-206ENST00000540122 ABCA6Q8N139 1617 aa26.26■■□□□ 1.79
PUDP-206ENST00000540122 AGLP35573 1532 aa26.25■■□□□ 1.79
PUDP-206ENST00000540122 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
PUDP-206ENST00000540122 MLH3Q9UHC1 1453 aa26.22■■□□□ 1.79
PUDP-206ENST00000540122 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
PUDP-206ENST00000540122 KIF14Q15058 1648 aa26.21■■□□□ 1.79
PUDP-206ENST00000540122 NCKAP5LQ9HCH0 1330 aa26.2■■□□□ 1.79
PUDP-206ENST00000540122 MED1Q15648 1581 aaPredicted RBP26.19■■□□□ 1.78
PUDP-206ENST00000540122 NPATQ14207 1427 aa26.17■■□□□ 1.78
PUDP-206ENST00000540122 CDK11AQ9UQ88 783 aaPredicted RBP26.13■■□□□ 1.77
PUDP-206ENST00000540122 ATP1B4Q9UN42 357 aaPredicted RBP26.12■■□□□ 1.77
PUDP-206ENST00000540122 HSPA1LP34931 641 aa26.11■■□□□ 1.77
PUDP-206ENST00000540122 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
PUDP-206ENST00000540122 PLA2R1Q13018 1463 aa26.1■■□□□ 1.77
PUDP-206ENST00000540122 PKD2Q13563 968 aa26.09■■□□□ 1.77
PUDP-206ENST00000540122 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
PUDP-206ENST00000540122 ABCC1P33527 1531 aa26.08■■□□□ 1.77
PUDP-206ENST00000540122 ZMYM3Q14202 1370 aa26.07■■□□□ 1.76
PUDP-206ENST00000540122 TCOF1Q13428 1488 aaKnown RBP26.07■■□□□ 1.76
PUDP-206ENST00000540122 CLIP1P30622 1438 aa26.05■■□□□ 1.76
PUDP-206ENST00000540122 EEA1Q15075 1411 aa26.05■■□□□ 1.76
PUDP-206ENST00000540122 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
PUDP-206ENST00000540122 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
PUDP-206ENST00000540122 ZNF142P52746 1687 aaPredicted RBP26.04■■□□□ 1.76
PUDP-206ENST00000540122 CDC42BPBQ9Y5S2 1711 aa26.04■■□□□ 1.76
PUDP-206ENST00000540122 KIDINS220Q9ULH0 1771 aa26.04■■□□□ 1.76
PUDP-206ENST00000540122 MYO3AQ8NEV4 1616 aa26.03■■□□□ 1.76
PUDP-206ENST00000540122 PIP4K2BP78356 416 aa26.03■■□□□ 1.76
PUDP-206ENST00000540122 PPP6R1Q9UPN7 881 aa26.02■■□□□ 1.76
PUDP-206ENST00000540122 ITSN2Q9NZM3 1697 aa26.02■■□□□ 1.76
PUDP-206ENST00000540122 CEP170BQ9Y4F5 1589 aaPredicted RBP26.01■■□□□ 1.75
PUDP-206ENST00000540122 PREX2Q70Z35 1606 aa25.99■■□□□ 1.75
PUDP-206ENST00000540122 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
PUDP-206ENST00000540122 TOM1O60784 492 aa25.96■■□□□ 1.75
PUDP-206ENST00000540122 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
PUDP-206ENST00000540122 SUPT6HQ7KZ85 1726 aaKnown RBP25.95■■□□□ 1.74
PUDP-206ENST00000540122 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
PUDP-206ENST00000540122 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
PUDP-206ENST00000540122 SAMD9LQ8IVG5 1584 aa25.92■■□□□ 1.74
PUDP-206ENST00000540122 CPS1P31327 1500 aa25.91■■□□□ 1.74
PUDP-206ENST00000540122 ARHGAP35Q9NRY4 1499 aa25.91■■□□□ 1.74
PUDP-206ENST00000540122 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
PUDP-206ENST00000540122 SHANK2Q9UPX8 1470 aa25.86■■□□□ 1.73
PUDP-206ENST00000540122 PLXNC1O60486 1568 aa25.85■■□□□ 1.73
PUDP-206ENST00000540122 SPAG9O60271 1321 aaKnown RBP25.85■■□□□ 1.73
PUDP-206ENST00000540122 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
PUDP-206ENST00000540122 DNMT1P26358 1616 aaKnown RBP25.83■■□□□ 1.73
PUDP-206ENST00000540122 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
PUDP-206ENST00000540122 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
PUDP-206ENST00000540122 CDC42BPAQ5VT25 1732 aa25.81■■□□□ 1.72
PUDP-206ENST00000540122 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
PUDP-206ENST00000540122 A2MP01023 1474 aa25.8■■□□□ 1.72
PUDP-206ENST00000540122 ATP7AQ04656 1500 aa25.79■■□□□ 1.72
PUDP-206ENST00000540122 GGT6Q6P531 493 aa25.79■■□□□ 1.72
PUDP-206ENST00000540122 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
PUDP-206ENST00000540122 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
PUDP-206ENST00000540122 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
PUDP-206ENST00000540122 VWDEQ8N2E2 1590 aa25.75■■□□□ 1.71
PUDP-206ENST00000540122 INO80Q9ULG1 1556 aaPredicted RBP25.75■■□□□ 1.71
PUDP-206ENST00000540122 HNRNPMP52272 730 aaKnown RBP eCLIP25.75■■□□□ 1.71
PUDP-206ENST00000540122 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
PUDP-206ENST00000540122 CCDC18Q5T9S5 1454 aa25.74■■□□□ 1.71
PUDP-206ENST00000540122 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
PUDP-206ENST00000540122 RGS17Q9UGC6 210 aaPredicted RBP25.69■■□□□ 1.7
PUDP-206ENST00000540122 GPATCH8Q9UKJ3 1502 aaKnown RBP25.68■■□□□ 1.7
PUDP-206ENST00000540122 KIAA1107Q9UPP5 1409 aa25.68■■□□□ 1.7
PUDP-206ENST00000540122 TNRQ92752 1358 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms