RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KIF14Q15058 1648 aa16.46■□□□□ 0.23
C11orf54-214ENST00000540113 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.22
C11orf54-214ENST00000540113 DAPK1P53355 1430 aa16.45■□□□□ 0.22
C11orf54-214ENST00000540113 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
C11orf54-214ENST00000540113 ABCA8O94911 1581 aa16.44■□□□□ 0.22
C11orf54-214ENST00000540113 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
C11orf54-214ENST00000540113 ABCC5O15440 1437 aa16.43■□□□□ 0.22
C11orf54-214ENST00000540113 KDM5BQ9UGL1 1544 aa16.43■□□□□ 0.22
C11orf54-214ENST00000540113 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
C11orf54-214ENST00000540113 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
C11orf54-214ENST00000540113 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
C11orf54-214ENST00000540113 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
C11orf54-214ENST00000540113 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
C11orf54-214ENST00000540113 CHD1O14646 1710 aa16.4■□□□□ 0.22
C11orf54-214ENST00000540113 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
C11orf54-214ENST00000540113 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
C11orf54-214ENST00000540113 FOXD1Q16676 465 aa16.37■□□□□ 0.21
C11orf54-214ENST00000540113 ATP10BO94823 1461 aa16.36■□□□□ 0.21
C11orf54-214ENST00000540113 CROCC2H7BZ55 1655 aa16.35■□□□□ 0.21
C11orf54-214ENST00000540113 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
C11orf54-214ENST00000540113 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
C11orf54-214ENST00000540113 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
C11orf54-214ENST00000540113 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
C11orf54-214ENST00000540113 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
C11orf54-214ENST00000540113 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
C11orf54-214ENST00000540113 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
C11orf54-214ENST00000540113 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
C11orf54-214ENST00000540113 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
C11orf54-214ENST00000540113 PTPRGP23470 1445 aa16.28■□□□□ 0.2
C11orf54-214ENST00000540113 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.19
C11orf54-214ENST00000540113 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.19
C11orf54-214ENST00000540113 ANP32CO43423 234 aa16.27■□□□□ 0.19
C11orf54-214ENST00000540113 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.19
C11orf54-214ENST00000540113 PZPP20742 1482 aa16.26■□□□□ 0.19
C11orf54-214ENST00000540113 ANKRD30BQ9BXX2 1392 aa16.25■□□□□ 0.19
C11orf54-214ENST00000540113 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
C11orf54-214ENST00000540113 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
C11orf54-214ENST00000540113 RPRD2Q5VT52 1461 aaKnown RBP16.23■□□□□ 0.19
C11orf54-214ENST00000540113 L3MBTL2Q969R5 705 aa16.22■□□□□ 0.19
C11orf54-214ENST00000540113 TEX14Q8IWB6 1497 aa16.21■□□□□ 0.19
C11orf54-214ENST00000540113 SHANK2Q9UPX8 1470 aa16.21■□□□□ 0.19
C11orf54-214ENST00000540113 CDC42BPBQ9Y5S2 1711 aa16.2■□□□□ 0.18
C11orf54-214ENST00000540113 BCANQ96GW7 911 aa16.19■□□□□ 0.18
C11orf54-214ENST00000540113 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
C11orf54-214ENST00000540113 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
C11orf54-214ENST00000540113 ANKRD30AQ9BXX3 1397 aa16.19■□□□□ 0.18
C11orf54-214ENST00000540113 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
C11orf54-214ENST00000540113 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
C11orf54-214ENST00000540113 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
C11orf54-214ENST00000540113 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
C11orf54-214ENST00000540113 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
C11orf54-214ENST00000540113 ANKRD50Q9ULJ7 1429 aa16.16■□□□□ 0.18
C11orf54-214ENST00000540113 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
C11orf54-214ENST00000540113 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
C11orf54-214ENST00000540113 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
C11orf54-214ENST00000540113 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
C11orf54-214ENST00000540113 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
C11orf54-214ENST00000540113 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
C11orf54-214ENST00000540113 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
C11orf54-214ENST00000540113 FKBP8Q14318 412 aa16.13■□□□□ 0.17
C11orf54-214ENST00000540113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.17
C11orf54-214ENST00000540113 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.17
C11orf54-214ENST00000540113 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
C11orf54-214ENST00000540113 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
C11orf54-214ENST00000540113 CCDC141Q6ZP82 1450 aa16.1■□□□□ 0.17
C11orf54-214ENST00000540113 KIF15Q9NS87 1388 aa16.09■□□□□ 0.17
C11orf54-214ENST00000540113 PKD2Q13563 968 aa16.08■□□□□ 0.17
C11orf54-214ENST00000540113 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
C11orf54-214ENST00000540113 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.16
C11orf54-214ENST00000540113 ZCCHC11Q5TAX3 1644 aaKnown RBP16.07■□□□□ 0.16
C11orf54-214ENST00000540113 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
C11orf54-214ENST00000540113 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
C11orf54-214ENST00000540113 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
C11orf54-214ENST00000540113 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
C11orf54-214ENST00000540113 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
C11orf54-214ENST00000540113 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
C11orf54-214ENST00000540113 NUP155O75694 1391 aa16.06■□□□□ 0.16
C11orf54-214ENST00000540113 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
C11orf54-214ENST00000540113 SPATA31E1Q6ZUB1 1445 aa16.04■□□□□ 0.16
C11orf54-214ENST00000540113 HNRNPUQ00839 825 aaKnown RBP eCLIP16.04■□□□□ 0.16
C11orf54-214ENST00000540113 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
C11orf54-214ENST00000540113 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
C11orf54-214ENST00000540113 CCDC7Q96M83 1385 aa16.02■□□□□ 0.15
C11orf54-214ENST00000540113 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
C11orf54-214ENST00000540113 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
C11orf54-214ENST00000540113 ARHGEF12Q9NZN5 1544 aa16■□□□□ 0.15
C11orf54-214ENST00000540113 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
C11orf54-214ENST00000540113 UNC13BO14795 1591 aa15.99■□□□□ 0.15
C11orf54-214ENST00000540113 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
C11orf54-214ENST00000540113 POLR3GLQ9BT43 218 aa15.99■□□□□ 0.15
C11orf54-214ENST00000540113 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
C11orf54-214ENST00000540113 KIF7Q2M1P5 1343 aa15.98■□□□□ 0.15
C11orf54-214ENST00000540113 NEFLP07196 543 aa15.97■□□□□ 0.15
C11orf54-214ENST00000540113 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
C11orf54-214ENST00000540113 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
C11orf54-214ENST00000540113 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
C11orf54-214ENST00000540113 PLCH2O75038 1416 aa15.96■□□□□ 0.14
C11orf54-214ENST00000540113 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
C11orf54-214ENST00000540113 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
C11orf54-214ENST00000540113 KDM5CP41229 1560 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms