RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ABCC5O15440 1437 aa25.11■■□□□ 1.61
LTBR-207ENST00000539925 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
LTBR-207ENST00000539925 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
LTBR-207ENST00000539925 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
LTBR-207ENST00000539925 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
LTBR-207ENST00000539925 ZNF644Q9H582 1327 aaPredicted RBP25.03■■□□□ 1.6
LTBR-207ENST00000539925 ADGRL2O95490 1459 aa25.02■■□□□ 1.6
LTBR-207ENST00000539925 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
LTBR-207ENST00000539925 CHIC2Q9UKJ5 165 aa25.02■■□□□ 1.6
LTBR-207ENST00000539925 ZCCHC11Q5TAX3 1644 aaKnown RBP25.02■■□□□ 1.6
LTBR-207ENST00000539925 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
LTBR-207ENST00000539925 PREX2Q70Z35 1606 aa25.01■■□□□ 1.59
LTBR-207ENST00000539925 ZNF777Q9ULD5 760 aaPredicted RBP24.99■■□□□ 1.59
LTBR-207ENST00000539925 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
LTBR-207ENST00000539925 ARHGEF5Q12774 1597 aa24.98■■□□□ 1.59
LTBR-207ENST00000539925 CROCC2H7BZ55 1655 aa24.97■■□□□ 1.59
LTBR-207ENST00000539925 ANKRD30AQ9BXX3 1397 aa24.97■■□□□ 1.59
LTBR-207ENST00000539925 ADGBQ8N7X0 1667 aa24.97■■□□□ 1.59
LTBR-207ENST00000539925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.591e-6■■■■■ 27.4
LTBR-207ENST00000539925 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
LTBR-207ENST00000539925 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
LTBR-207ENST00000539925 TSPY4P0CV99 314 aa24.92■■□□□ 1.58
LTBR-207ENST00000539925 TSPY10P0CW01 314 aa24.92■■□□□ 1.58
LTBR-207ENST00000539925 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
LTBR-207ENST00000539925 MYO5CQ9NQX4 1742 aa24.9■■□□□ 1.58
LTBR-207ENST00000539925 TTC37Q6PGP7 1564 aa24.9■■□□□ 1.58
LTBR-207ENST00000539925 ARAP3Q8WWN8 1544 aa24.9■■□□□ 1.58
LTBR-207ENST00000539925 CDC42BPBQ9Y5S2 1711 aa24.9■■□□□ 1.58
LTBR-207ENST00000539925 ARHGAP5Q13017 1502 aa24.89■■□□□ 1.58
LTBR-207ENST00000539925 PLCH2O75038 1416 aa24.89■■□□□ 1.57
LTBR-207ENST00000539925 CCDC141Q6ZP82 1450 aa24.88■■□□□ 1.57
LTBR-207ENST00000539925 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
LTBR-207ENST00000539925 MBD5Q9P267 1494 aa24.88■■□□□ 1.57
LTBR-207ENST00000539925 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
LTBR-207ENST00000539925 SAMD9LQ8IVG5 1584 aa24.86■■□□□ 1.57
LTBR-207ENST00000539925 TRIM52Q96A61 297 aa24.86■■□□□ 1.57
LTBR-207ENST00000539925 EFCAB2Q5VUJ9 269 aa24.85■■□□□ 1.57
LTBR-207ENST00000539925 KCNH8Q96L42 1107 aa24.84■■□□□ 1.57
LTBR-207ENST00000539925 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
LTBR-207ENST00000539925 MAST1Q9Y2H9 1570 aa24.81■■□□□ 1.56
LTBR-207ENST00000539925 KDM6BO15054 1643 aa24.8■■□□□ 1.56
LTBR-207ENST00000539925 MPHOSPH9Q99550 1183 aa24.8■■□□□ 1.56
LTBR-207ENST00000539925 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
LTBR-207ENST00000539925 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
LTBR-207ENST00000539925 NEUROD1Q13562 356 aa24.76■■□□□ 1.55
LTBR-207ENST00000539925 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
LTBR-207ENST00000539925 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
LTBR-207ENST00000539925 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
LTBR-207ENST00000539925 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
LTBR-207ENST00000539925 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
LTBR-207ENST00000539925 ABCA9Q8IUA7 1624 aa24.74■■□□□ 1.55
LTBR-207ENST00000539925 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
LTBR-207ENST00000539925 ABCC1P33527 1531 aa24.7■■□□□ 1.54
LTBR-207ENST00000539925 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
LTBR-207ENST00000539925 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
LTBR-207ENST00000539925 PLXNC1O60486 1568 aa24.69■■□□□ 1.54
LTBR-207ENST00000539925 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
LTBR-207ENST00000539925 KDM5DQ9BY66 1539 aa24.67■■□□□ 1.54
LTBR-207ENST00000539925 PZPP20742 1482 aa24.65■■□□□ 1.54
LTBR-207ENST00000539925 ANKRD30BQ9BXX2 1392 aa24.65■■□□□ 1.54
LTBR-207ENST00000539925 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
LTBR-207ENST00000539925 FANCAO15360 1455 aa24.62■■□□□ 1.53
LTBR-207ENST00000539925 DUOX2Q9NRD8 1548 aa24.61■■□□□ 1.53
LTBR-207ENST00000539925 ARHGEF12Q9NZN5 1544 aa24.61■■□□□ 1.53
LTBR-207ENST00000539925 ERBINQ96RT1 1412 aa24.59■■□□□ 1.53
LTBR-207ENST00000539925 NUP155O75694 1391 aa24.58■■□□□ 1.53
LTBR-207ENST00000539925 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.52
LTBR-207ENST00000539925 CFAP74Q9C0B2 1584 aa24.56■■□□□ 1.52
LTBR-207ENST00000539925 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
LTBR-207ENST00000539925 SPAG9O60271 1321 aaKnown RBP24.55■■□□□ 1.52
LTBR-207ENST00000539925 ADGRL1O94910 1474 aa24.52■■□□□ 1.52
LTBR-207ENST00000539925 UNC13BO14795 1591 aa24.51■■□□□ 1.51
LTBR-207ENST00000539925 PKD2Q13563 968 aa24.51■■□□□ 1.51
LTBR-207ENST00000539925 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
LTBR-207ENST00000539925 SCAPERQ9BY12 1400 aa24.48■■□□□ 1.51
LTBR-207ENST00000539925 ZFYVE16Q7Z3T8 1539 aa24.47■■□□□ 1.51
LTBR-207ENST00000539925 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
LTBR-207ENST00000539925 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
LTBR-207ENST00000539925 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
LTBR-207ENST00000539925 FOXD1Q16676 465 aa24.46■■□□□ 1.51
LTBR-207ENST00000539925 FAM135AQ9P2D6 1515 aa24.46■■□□□ 1.51
LTBR-207ENST00000539925 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.5
LTBR-207ENST00000539925 INO80Q9ULG1 1556 aaPredicted RBP24.43■■□□□ 1.5
LTBR-207ENST00000539925 ZNF518AQ6AHZ1 1483 aa24.43■■□□□ 1.5
LTBR-207ENST00000539925 ATP7AQ04656 1500 aa24.43■■□□□ 1.5
LTBR-207ENST00000539925 NEO1Q92859 1461 aa24.42■■□□□ 1.5
LTBR-207ENST00000539925 AFAP1Q8N556 730 aa24.42■■□□□ 1.5
LTBR-207ENST00000539925 IQGAP3Q86VI3 1631 aa24.42■■□□□ 1.5
LTBR-207ENST00000539925 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
LTBR-207ENST00000539925 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
LTBR-207ENST00000539925 L3MBTL2Q969R5 705 aa24.4■■□□□ 1.5
LTBR-207ENST00000539925 GLI2P10070 1586 aa24.4■■□□□ 1.5
LTBR-207ENST00000539925 DHX29Q7Z478 1369 aaKnown RBP24.34■■□□□ 1.49
LTBR-207ENST00000539925 EIF2AK4Q9P2K8 1649 aaKnown RBP24.34■■□□□ 1.49
LTBR-207ENST00000539925 POGZQ7Z3K3 1410 aa24.34■■□□□ 1.49
LTBR-207ENST00000539925 KDM5CP41229 1560 aa24.32■■□□□ 1.48
LTBR-207ENST00000539925 ATP10AO60312 1499 aa24.32■■□□□ 1.48
LTBR-207ENST00000539925 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
LTBR-207ENST00000539925 KANK1Q14678 1352 aa24.31■■□□□ 1.48
LTBR-207ENST00000539925 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms