RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
SPARC-209ENST00000539687 CLASP1Q7Z460 1538 aa14.84□□□□□ -0.03
SPARC-209ENST00000539687 UACAQ9BZF9 1416 aa14.83□□□□□ -0.03
SPARC-209ENST00000539687 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
SPARC-209ENST00000539687 NAIPQ13075 1403 aa14.83□□□□□ -0.04
SPARC-209ENST00000539687 ATP10BO94823 1461 aa14.82□□□□□ -0.04
SPARC-209ENST00000539687 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
SPARC-209ENST00000539687 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
SPARC-209ENST00000539687 MAPKBP1O60336 1514 aa14.81□□□□□ -0.04
SPARC-209ENST00000539687 PTPRKQ15262 1439 aa14.8□□□□□ -0.04
SPARC-209ENST00000539687 DAPK1P53355 1430 aa14.79□□□□□ -0.04
SPARC-209ENST00000539687 ABCC2Q92887 1545 aa14.79□□□□□ -0.04
SPARC-209ENST00000539687 GPATCH8Q9UKJ3 1502 aaKnown RBP14.79□□□□□ -0.04
SPARC-209ENST00000539687 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
SPARC-209ENST00000539687 UHRF1BP1LA0JNW5 1464 aa14.77□□□□□ -0.04
SPARC-209ENST00000539687 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.05
SPARC-209ENST00000539687 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
SPARC-209ENST00000539687 ABCC10Q5T3U5 1492 aa14.76□□□□□ -0.05
SPARC-209ENST00000539687 ABCC5O15440 1437 aa14.75□□□□□ -0.05
SPARC-209ENST00000539687 SHANK2Q9UPX8 1470 aa14.74□□□□□ -0.05
SPARC-209ENST00000539687 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
SPARC-209ENST00000539687 ADGRL2O95490 1459 aa14.72□□□□□ -0.05
SPARC-209ENST00000539687 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
SPARC-209ENST00000539687 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
SPARC-209ENST00000539687 CROCC2H7BZ55 1655 aa14.71□□□□□ -0.05
SPARC-209ENST00000539687 RSPH4AQ5TD94 716 aa14.71□□□□□ -0.05
SPARC-209ENST00000539687 CDC42BPAQ5VT25 1732 aa14.7□□□□□ -0.06
SPARC-209ENST00000539687 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
SPARC-209ENST00000539687 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
SPARC-209ENST00000539687 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
SPARC-209ENST00000539687 PREX2Q70Z35 1606 aa14.68□□□□□ -0.06
SPARC-209ENST00000539687 KDM5BQ9UGL1 1544 aa14.67□□□□□ -0.06
SPARC-209ENST00000539687 RRP7BPQ9NSQ0 103 aa14.67□□□□□ -0.06
SPARC-209ENST00000539687 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
SPARC-209ENST00000539687 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
SPARC-209ENST00000539687 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
SPARC-209ENST00000539687 NCOA1Q15788 1441 aa14.65□□□□□ -0.06
SPARC-209ENST00000539687 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
SPARC-209ENST00000539687 TSPY4P0CV99 314 aa14.63□□□□□ -0.07
SPARC-209ENST00000539687 TSPY10P0CW01 314 aa14.63□□□□□ -0.07
SPARC-209ENST00000539687 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
SPARC-209ENST00000539687 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
SPARC-209ENST00000539687 TRIM52Q96A61 297 aa14.62□□□□□ -0.07
SPARC-209ENST00000539687 ZNF777Q9ULD5 760 aaPredicted RBP14.62□□□□□ -0.07
SPARC-209ENST00000539687 CCDC141Q6ZP82 1450 aa14.62□□□□□ -0.07
SPARC-209ENST00000539687 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
SPARC-209ENST00000539687 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
SPARC-209ENST00000539687 C9orf84Q5VXU9 1444 aa14.61□□□□□ -0.07
SPARC-209ENST00000539687 KIAA1107Q9UPP5 1409 aa14.61□□□□□ -0.07
SPARC-209ENST00000539687 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
SPARC-209ENST00000539687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
SPARC-209ENST00000539687 MAST1Q9Y2H9 1570 aa14.6□□□□□ -0.07
SPARC-209ENST00000539687 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
SPARC-209ENST00000539687 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
SPARC-209ENST00000539687 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
SPARC-209ENST00000539687 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.07
SPARC-209ENST00000539687 SAMD9LQ8IVG5 1584 aa14.58□□□□□ -0.08
SPARC-209ENST00000539687 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.08
SPARC-209ENST00000539687 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
SPARC-209ENST00000539687 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
SPARC-209ENST00000539687 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
SPARC-209ENST00000539687 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
SPARC-209ENST00000539687 KDM6BO15054 1643 aa14.56□□□□□ -0.08
SPARC-209ENST00000539687 PLCH2O75038 1416 aa14.56□□□□□ -0.08
SPARC-209ENST00000539687 KDM5DQ9BY66 1539 aa14.55□□□□□ -0.08
SPARC-209ENST00000539687 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
SPARC-209ENST00000539687 EFCAB2Q5VUJ9 269 aa14.53□□□□□ -0.08
SPARC-209ENST00000539687 PLXNC1O60486 1568 aa14.52□□□□□ -0.08
SPARC-209ENST00000539687 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
SPARC-209ENST00000539687 DENND4BO75064 1496 aaPredicted RBP14.51□□□□□ -0.09
SPARC-209ENST00000539687 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
SPARC-209ENST00000539687 KIF13AQ9H1H9 1805 aa14.51□□□□□ -0.09
SPARC-209ENST00000539687 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
SPARC-209ENST00000539687 RPRD2Q5VT52 1461 aaKnown RBP14.5□□□□□ -0.09
SPARC-209ENST00000539687 PZPP20742 1482 aa14.5□□□□□ -0.09
SPARC-209ENST00000539687 ANKRD30BQ9BXX2 1392 aa14.49□□□□□ -0.09
SPARC-209ENST00000539687 ABCC1P33527 1531 aa14.48□□□□□ -0.09
SPARC-209ENST00000539687 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPARC-209ENST00000539687 HNRNPMP52272 730 aaKnown RBP eCLIP14.47□□□□□ -0.09
SPARC-209ENST00000539687 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
SPARC-209ENST00000539687 DUOX2Q9NRD8 1548 aa14.46□□□□□ -0.09
SPARC-209ENST00000539687 ERBINQ96RT1 1412 aa14.46□□□□□ -0.09
SPARC-209ENST00000539687 RTEL1-TNFRSF6BF6WH68 1400 aa14.45□□□□□ -0.1
SPARC-209ENST00000539687 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
SPARC-209ENST00000539687 KCNH8Q96L42 1107 aa14.45□□□□□ -0.1
SPARC-209ENST00000539687 NUP155O75694 1391 aa14.44□□□□□ -0.1
SPARC-209ENST00000539687 UNC13BO14795 1591 aa14.43□□□□□ -0.1
SPARC-209ENST00000539687 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
SPARC-209ENST00000539687 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
SPARC-209ENST00000539687 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
SPARC-209ENST00000539687 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
SPARC-209ENST00000539687 FANCAO15360 1455 aa14.39□□□□□ -0.11
SPARC-209ENST00000539687 PKD2Q13563 968 aa14.39□□□□□ -0.11
SPARC-209ENST00000539687 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
SPARC-209ENST00000539687 FAM135AQ9P2D6 1515 aa14.38□□□□□ -0.11
SPARC-209ENST00000539687 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
SPARC-209ENST00000539687 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
SPARC-209ENST00000539687 MIER1Q8N108 512 aa14.36□□□□□ -0.11
SPARC-209ENST00000539687 L3MBTL2Q969R5 705 aa14.36□□□□□ -0.11
SPARC-209ENST00000539687 SPAG9O60271 1321 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms