RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 SOCS7O14512 581 aa12.37□□□□□ -0.43
LRTOMT-217ENST00000539587 PLCH2O75038 1416 aa12.37□□□□□ -0.43
LRTOMT-217ENST00000539587 PREX1Q8TCU6 1659 aa12.36□□□□□ -0.43
LRTOMT-217ENST00000539587 ATP10AO60312 1499 aa12.36□□□□□ -0.43
LRTOMT-217ENST00000539587 SCAPERQ9BY12 1400 aa12.36□□□□□ -0.43
LRTOMT-217ENST00000539587 CEBPAP49715 358 aaPredicted RBP12.34□□□□□ -0.43
LRTOMT-217ENST00000539587 MLECQ14165 292 aa12.34□□□□□ -0.43
LRTOMT-217ENST00000539587 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
LRTOMT-217ENST00000539587 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
LRTOMT-217ENST00000539587 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
LRTOMT-217ENST00000539587 DISP3Q9P2K9 1392 aa12.3□□□□□ -0.44
LRTOMT-217ENST00000539587 CDK13Q14004 1512 aaKnown RBP12.3□□□□□ -0.44
LRTOMT-217ENST00000539587 PTPRTO14522 1441 aa12.29□□□□□ -0.44
LRTOMT-217ENST00000539587 LTBP4Q8N2S1 1624 aa12.29□□□□□ -0.44
LRTOMT-217ENST00000539587 KDM5CP41229 1560 aa12.28□□□□□ -0.44
LRTOMT-217ENST00000539587 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
LRTOMT-217ENST00000539587 REREQ9P2R6 1566 aa12.27□□□□□ -0.44
LRTOMT-217ENST00000539587 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
LRTOMT-217ENST00000539587 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
LRTOMT-217ENST00000539587 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
LRTOMT-217ENST00000539587 EEA1Q15075 1411 aa12.26□□□□□ -0.45
LRTOMT-217ENST00000539587 C3P01024 1663 aa12.26□□□□□ -0.45
LRTOMT-217ENST00000539587 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
LRTOMT-217ENST00000539587 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
LRTOMT-217ENST00000539587 DIP2CQ9Y2E4 1556 aa12.24□□□□□ -0.45
LRTOMT-217ENST00000539587 KIF14Q15058 1648 aa12.23□□□□□ -0.45
LRTOMT-217ENST00000539587 AGLP35573 1532 aa12.23□□□□□ -0.45
LRTOMT-217ENST00000539587 IQSEC2Q5JU85 1478 aa12.23□□□□□ -0.45
LRTOMT-217ENST00000539587 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
LRTOMT-217ENST00000539587 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
LRTOMT-217ENST00000539587 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
LRTOMT-217ENST00000539587 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
LRTOMT-217ENST00000539587 ABCA6Q8N139 1617 aa12.21□□□□□ -0.46
LRTOMT-217ENST00000539587 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
LRTOMT-217ENST00000539587 LRRIQ1Q96JM4 1722 aa12.2□□□□□ -0.46
LRTOMT-217ENST00000539587 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
LRTOMT-217ENST00000539587 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
LRTOMT-217ENST00000539587 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
LRTOMT-217ENST00000539587 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
LRTOMT-217ENST00000539587 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
LRTOMT-217ENST00000539587 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
LRTOMT-217ENST00000539587 NPATQ14207 1427 aa12.14□□□□□ -0.47
LRTOMT-217ENST00000539587 MROH2AA6NES4 1674 aa12.14□□□□□ -0.47
LRTOMT-217ENST00000539587 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
LRTOMT-217ENST00000539587 ABCC1P33527 1531 aa12.14□□□□□ -0.47
LRTOMT-217ENST00000539587 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
LRTOMT-217ENST00000539587 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
LRTOMT-217ENST00000539587 PREX2Q70Z35 1606 aa12.13□□□□□ -0.47
LRTOMT-217ENST00000539587 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
LRTOMT-217ENST00000539587 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
LRTOMT-217ENST00000539587 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
LRTOMT-217ENST00000539587 CDC42BPAQ5VT25 1732 aa12.11□□□□□ -0.47
LRTOMT-217ENST00000539587 CLIP1P30622 1438 aa12.1□□□□□ -0.47
LRTOMT-217ENST00000539587 ZNF335Q9H4Z2 1342 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-217ENST00000539587 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
LRTOMT-217ENST00000539587 TCOF1Q13428 1488 aaKnown RBP12.09□□□□□ -0.47
LRTOMT-217ENST00000539587 PLA2R1Q13018 1463 aa12.08□□□□□ -0.47
LRTOMT-217ENST00000539587 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-217ENST00000539587 PKD2Q13563 968 aa12.07□□□□□ -0.48
LRTOMT-217ENST00000539587 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
LRTOMT-217ENST00000539587 ESF1Q9H501 851 aaKnown RBP12.07□□□□□ -0.48
LRTOMT-217ENST00000539587 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
LRTOMT-217ENST00000539587 UBAP1LF5GYI3 381 aa12.06□□□□□ -0.48
LRTOMT-217ENST00000539587 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-217ENST00000539587 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-217ENST00000539587 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
LRTOMT-217ENST00000539587 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
LRTOMT-217ENST00000539587 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
LRTOMT-217ENST00000539587 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
LRTOMT-217ENST00000539587 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
LRTOMT-217ENST00000539587 CEP170BQ9Y4F5 1589 aaPredicted RBP12.03□□□□□ -0.48
LRTOMT-217ENST00000539587 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
LRTOMT-217ENST00000539587 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
LRTOMT-217ENST00000539587 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRTOMT-217ENST00000539587 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
LRTOMT-217ENST00000539587 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
LRTOMT-217ENST00000539587 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
LRTOMT-217ENST00000539587 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
LRTOMT-217ENST00000539587 DNMT1P26358 1616 aaKnown RBP12□□□□□ -0.49
LRTOMT-217ENST00000539587 HSPA1LP34931 641 aa12□□□□□ -0.49
LRTOMT-217ENST00000539587 A2MP01023 1474 aa12□□□□□ -0.49
LRTOMT-217ENST00000539587 ATP7AQ04656 1500 aa12□□□□□ -0.49
LRTOMT-217ENST00000539587 ALKQ9UM73 1620 aa12□□□□□ -0.49
LRTOMT-217ENST00000539587 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
LRTOMT-217ENST00000539587 A2ML1A8K2U0 1454 aa11.99□□□□□ -0.49
LRTOMT-217ENST00000539587 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
LRTOMT-217ENST00000539587 NEURL4Q96JN8 1562 aa11.98□□□□□ -0.49
LRTOMT-217ENST00000539587 ZNF777Q9ULD5 760 aaPredicted RBP11.97□□□□□ -0.49
LRTOMT-217ENST00000539587 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
LRTOMT-217ENST00000539587 GGT6Q6P531 493 aa11.96□□□□□ -0.49
LRTOMT-217ENST00000539587 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
LRTOMT-217ENST00000539587 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 POLR1AO95602 1720 aaPredicted RBP11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 CPS1P31327 1500 aa11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
LRTOMT-217ENST00000539587 TOM1O60784 492 aa11.94□□□□□ -0.5
LRTOMT-217ENST00000539587 FBXO31Q5XUX0 539 aaPredicted RBP11.93□□□□□ -0.5
LRTOMT-217ENST00000539587 CFDP1Q9UEE9 299 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms