RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 WDR62O43379 1518 aa16.63■□□□□ 0.25
PTCD2-211ENST00000536805 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
PTCD2-211ENST00000536805 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
PTCD2-211ENST00000536805 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
PTCD2-211ENST00000536805 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
PTCD2-211ENST00000536805 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
PTCD2-211ENST00000536805 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
PTCD2-211ENST00000536805 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
PTCD2-211ENST00000536805 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
PTCD2-211ENST00000536805 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
PTCD2-211ENST00000536805 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
PTCD2-211ENST00000536805 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
PTCD2-211ENST00000536805 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
PTCD2-211ENST00000536805 DAPK1P53355 1430 aa16.58■□□□□ 0.24
PTCD2-211ENST00000536805 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
PTCD2-211ENST00000536805 CDK13Q14004 1512 aaKnown RBP16.58■□□□□ 0.24
PTCD2-211ENST00000536805 C11orf95C9JLR9 678 aaPredicted RBP16.57■□□□□ 0.24
PTCD2-211ENST00000536805 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
PTCD2-211ENST00000536805 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
PTCD2-211ENST00000536805 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
PTCD2-211ENST00000536805 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
PTCD2-211ENST00000536805 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
PTCD2-211ENST00000536805 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
PTCD2-211ENST00000536805 ABCC5O15440 1437 aa16.53■□□□□ 0.24
PTCD2-211ENST00000536805 MBD5Q9P267 1494 aa16.52■□□□□ 0.23
PTCD2-211ENST00000536805 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
PTCD2-211ENST00000536805 KIF14Q15058 1648 aa16.48■□□□□ 0.23
PTCD2-211ENST00000536805 FOXD1Q16676 465 aa16.48■□□□□ 0.23
PTCD2-211ENST00000536805 B4GALNT3Q6L9W6 998 aa16.48■□□□□ 0.23
PTCD2-211ENST00000536805 DHX29Q7Z478 1369 aaKnown RBP16.48■□□□□ 0.23
PTCD2-211ENST00000536805 PZPP20742 1482 aa16.47■□□□□ 0.23
PTCD2-211ENST00000536805 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
PTCD2-211ENST00000536805 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
PTCD2-211ENST00000536805 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
PTCD2-211ENST00000536805 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
PTCD2-211ENST00000536805 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
PTCD2-211ENST00000536805 BCORL1Q5H9F3 1711 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 KDM5CP41229 1560 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 NUDCQ9Y266 331 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 ADGRL2O95490 1459 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
PTCD2-211ENST00000536805 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
PTCD2-211ENST00000536805 KIAA1107Q9UPP5 1409 aa16.42■□□□□ 0.22
PTCD2-211ENST00000536805 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
PTCD2-211ENST00000536805 USP47Q96K76 1375 aa16.4■□□□□ 0.22
PTCD2-211ENST00000536805 DISP1Q96F81 1524 aa16.4■□□□□ 0.22
PTCD2-211ENST00000536805 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
PTCD2-211ENST00000536805 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
PTCD2-211ENST00000536805 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
PTCD2-211ENST00000536805 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
PTCD2-211ENST00000536805 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
PTCD2-211ENST00000536805 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
PTCD2-211ENST00000536805 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
PTCD2-211ENST00000536805 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
PTCD2-211ENST00000536805 ZNF644Q9H582 1327 aaPredicted RBP16.35■□□□□ 0.21
PTCD2-211ENST00000536805 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
PTCD2-211ENST00000536805 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.21
PTCD2-211ENST00000536805 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
PTCD2-211ENST00000536805 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
PTCD2-211ENST00000536805 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
PTCD2-211ENST00000536805 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
PTCD2-211ENST00000536805 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
PTCD2-211ENST00000536805 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
PTCD2-211ENST00000536805 KIF15Q9NS87 1388 aa16.31■□□□□ 0.2
PTCD2-211ENST00000536805 E9PCH4 1651 aa16.31■□□□□ 0.2
PTCD2-211ENST00000536805 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
PTCD2-211ENST00000536805 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
PTCD2-211ENST00000536805 ANKRD30AQ9BXX3 1397 aa16.3■□□□□ 0.2
PTCD2-211ENST00000536805 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
PTCD2-211ENST00000536805 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
PTCD2-211ENST00000536805 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
PTCD2-211ENST00000536805 IPO9Q96P70 1041 aaKnown RBP16.28■□□□□ 0.2
PTCD2-211ENST00000536805 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
PTCD2-211ENST00000536805 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
PTCD2-211ENST00000536805 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
PTCD2-211ENST00000536805 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
PTCD2-211ENST00000536805 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
PTCD2-211ENST00000536805 PKD2Q13563 968 aa16.26■□□□□ 0.19
PTCD2-211ENST00000536805 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
PTCD2-211ENST00000536805 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
PTCD2-211ENST00000536805 RALBP1Q15311 655 aa16.25■□□□□ 0.19
PTCD2-211ENST00000536805 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
PTCD2-211ENST00000536805 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
PTCD2-211ENST00000536805 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
PTCD2-211ENST00000536805 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
PTCD2-211ENST00000536805 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
PTCD2-211ENST00000536805 PTPRGP23470 1445 aa16.21■□□□□ 0.19
PTCD2-211ENST00000536805 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
PTCD2-211ENST00000536805 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
PTCD2-211ENST00000536805 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
PTCD2-211ENST00000536805 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
PTCD2-211ENST00000536805 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
PTCD2-211ENST00000536805 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
PTCD2-211ENST00000536805 INSRP06213 1382 aa16.18■□□□□ 0.18
PTCD2-211ENST00000536805 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
PTCD2-211ENST00000536805 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
PTCD2-211ENST00000536805 NBR1Q14596 966 aa16.18■□□□□ 0.18
PTCD2-211ENST00000536805 NUP155O75694 1391 aa16.18■□□□□ 0.18
PTCD2-211ENST00000536805 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms